Bos indicus (zebu cattle): 109564954
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Entry
109564954 CDS
T04792
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04140
Autophagy - animal
biu04148
Efferocytosis
biu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109564954 (VPS18)
04148 Efferocytosis
109564954 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109564954 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109564954 (VPS18)
Membrane trafficking [BR:
biu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109564954 (VPS18)
Hops complex
109564954 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
109564954
NCBI-ProteinID:
XP_019824114
UniProt:
A0A6P5CFL6
LinkDB
All DBs
Position
10:36345256..36354013
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSTVLQPGCPSVGIPHSGYVNAQLEKEAPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDPTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRVAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLAXRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAHTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTAWLTELYLSRLGALQGDPDALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGTAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctggatgaatacgaggactccctgtcccgctcgaccgtcttgcagccc
ggctgccccagcgtgggcatcccccactcgggatatgtgaatgcccagctagagaaggaa
gcgcccatcttcacgaagcagcgcattgactttaccccttccgagcgcatcaccagtctt
gtcgtctcctgcaatcagctctgcatgagccttggcaaggatacactactccgcattgac
ttgggcaaagcaaatgaacccaaccacatggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccccactggttctcatctgctgatcgctctgagcagcactgag
gtcctctatgtgaatcgtaatggacagaaggttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaataaggccctgggcactgagagcagcacgggtcccatc
ctggttggcaccgcccaagggcagatctttgaagcagagctttcggccagcgagggtggg
ctttttggccctgccccggatctctacttccgtccattgtacgtgctaaatgaagaaggg
ggcccagcacctgtgtgctcccttgaggctgagcggggccctgaagggcgtggttttgtc
atcgccaccactcggcagcgcctcttccagttcataggccgagtggcggagggagctgag
gcccagggtttctcggggctctttgctgcctatgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagcgagctggccttctacacccccaagttgcgctctgca
ccccgggccttcgcctggatgatgggagatggcgtgttgtatggatcgttggactgcgga
cgtccggactccctgctgagtgaggagcgggtctgggagtacccagagggggtgggtccc
ggggccagcccacccctggccattgtcctgacccagttccacttcctgctgctgctggca
grccgggtggaggcagtgtgcacgctgacgggacaggtggtgctgcgggaccacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacgggtcacctgtgggcc
cacaccgagcgggctgtcttccgctaccacgtacagcgggaggcacgggatgtctggcgc
acctacctagacatgaaccgcttcgacctggccaaggagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaggctgacttctgcttccgccagcgtcgctacctg
gagagcgctcgctgctatgccctgactcagagctactttgaagagattgcccttaagttc
ttggaggcccgacaggaggaggcgctggccgagttcctgcagcgaaaactggccagtttg
aagcctgccgaacgaacccaggcaaccctgctgaccgcgtggctgacggagctctacttg
agccggctcggggccctgcagggtgaccccgacgccctgaacctctaccgggaaacccgt
gagcgcttccgctccttcctcagcagccctcgccacaaggagtggctctttgccagccgg
gcctccatccacgagctgttggccagccacggggacacggagcacatggtgtactttgct
gtgatcatgcaggactacgagcgcgtggtggcttaccactgccagcatgaggcttacgag
gaggccttggccgtgctggcccgccaccgtgatccccagctcttctacaagttttcgccc
atccttatccgacacatccctcgccagctggtggacgcctggattgagatgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccaaggtggcgaggcccag
caggtgagccaagccatccgctacatggagttctgcgtgaatgtgctgggcgagaccgag
caggctattcacaattacctgctgtcgctctatgcccggggccagccagcctcactgctg
gcctacctggagcaggccggggccagcccacatcgcgtgcattatgatctcaagtatgcg
ctgcggctctgtgctgaacacggccaccaccgtgcttgtgtccacgtctacaaggtcctg
gagctgtatgaggaggctgtggacctggccctgcaggtggatgtggacctggccaagcag
tgtgctgacctgcctgaggaagacgaggagctgcgcaagaagctgtggctaaagattgcg
cggcacgtggtgcaggaggargaagatgtacagacggccatggcctgcctggccagctgc
cccctgctcaagattgaagatgtgctgcctttctttcctgacttcgtcaccattgaccac
ttcaaggaggccatctgcagctcactgaaggcctacaaccaccacatccaagagctacag
cgagagatggaagaggccacagccagtgcccagcgcatccggagagacctgcaggagctg
cggggccgctatggcaccgtagagccccaggacaaatgtgccacctgcgactttcccctg
ctcaaccgccccttttacctcttcctctgtggccacatgttccatgctgactgcctgctg
caggctgtgcggcctggcctgccggcctacaagcaggcccggctcgaggagctgcagcga
aagctaggggctgctccaccccctgccaagggctctgcccgggctaaggaggctgagggg
ggcactgctgctggggggcccagccgggaacagctcaaggctgacctggatgaacttgtg
gcygctgagtgcgtgtactgtggggagctgatgatccgctctattgaccggcccttcatc
gacccccagcgctacgaggaggagcacctcagttggttgtag
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