Bos indicus (zebu cattle): 109564984 Help Entry 109564984         CDS       T04792                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism biu  Bos indicus (zebu cattle) Pathway biu04140   Autophagy - animal biu04142   Lysosome biogenesis biu04145   Phagocytosis biu04148   Efferocytosis biu05132   Salmonella infection Brite KEGG Orthology (KO) [BR:biu00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     109564984 (VPS39)    04142 Lysosome biogenesis     109564984 (VPS39)    04140 Autophagy - animal     109564984 (VPS39)    04148 Efferocytosis     109564984 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     109564984 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:biu04131]     109564984 (VPS39) Membrane trafficking [BR:biu04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     109564984 (VPS39) SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin LIF1_N Beta-prop_RIG_2nd VPS18_solenoid_2nd DUF4145 Lgl_C SAM_CEP-1_C EcoR124_C Motif Other DBs NCBI-GeneID:  109564984 NCBI-ProteinID:  XP_019824151 UniProt:  A0A6P5CE40 LinkDB All DBs Position 10 Genome browser AA seq 875 aa AA seqDB search MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHAETGD EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD GKGANKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLAIPYLEHVIHVW EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKAPVPAGEEEGELGEYRRKLLMFLEIS SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTRMAEEYCHKHYDQNK DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgccttcgagccggtgccgattctagaaaagctgcctctgcagatcgactgt ctggctgcctgggaggaatggctgcttgttggaacaaaacaaggtcatcttcttctctat aggattcggaaagacgttggttgcaacaggtttgaagtgacattagagaaatccaataag aacttctccaaaaagattcagcagatccatgtggtctcccagtttaagattctggtcagc ttgttagaaaataatatttacgtccatgacctgttgacatttcaacaaatcactacggtt tccaaggcaaagggagcatcattgttcacatgtgaccttcagcacgcagagactggggac gaggtgttgcggatgtgtgttgccgtgaaaaagaagctgcagctctatttctggaaagac agggaatttcatgagttgcagggggactttagtgtaccggatgtgcccaagtccatggca tggtgcgaaaattctatctgtgtgggcttcaagagagactactacctaataagggtggat ggaaagggggccaacaaagagctcttcccaacaggaaaacagctggaacccttagttgca cctctggcrgatggaaaagtagctgtgggtcaggatgatctcactgtggtgctcaatgag gaggggatctgcacgcagaagtgtgccctgaactggacagacatcccagtggccatggag caccagcctccctacatcattgcagtgttgcctcgatatgtggaaatccggacatttgag ccgaggcttctggtccagagcattgaactgcaaagaccccgtttcattacttcgggcgga tcaaacattatctatgtggccagtaatcactttgtctggagactcattccagtccccatg gcgacccaaatccaacagcttctccaggacaagcagtttgaattggctctgcagctcgca gaaatgaaagatgattccgacagtgaaaagcagcaacagatccatcacatcaagaacttg tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaaa cttggcacagatcctacccatgtgatgggcctgtacccagacctgctgcccacagactac aggaagcagctgcagtatcctaacccactgcctgtgctgtctggggctgagctggagaag gctcacttagctctaattgactacctgacacagaaacgcagccaattggtaaagaagctg aatgactctgatcaccagtctagcacctcccctctcatggaagggactcctaccatcaaa tccaagaaaaagctgctgcagatcattgacaccaccctgctcaagtgctaccttcatacg aacgtggccctggtggcccccttgctgcgtctggagaacaatcactgccacatcgaagag agcgagcacgtgctgaagaaggctcacaagtacagygagctgatcatcctgtacgagaag aaggggctccacgagaaagctctgcaggtgctggtggaccagtccaaaaaagcaaattcc cctctgaaaggccatgagcggacagtgcagtacctgcaacatctgggcacagaaaatctg catytaattttttcctactcggtgtgggtgctgagagacttyccagaggatggtctgaag atatttactgaggacctcccagaggtggagtctctgccacgagaccgagtgctgggcttc ttagtggagaattttaagggtctggctattccatatctggaacatgtcatccacgtttgg gaggagactggctctcggttccacaactgcctgatccagttgtactgcgagaaggtgcaa ggtctgatgaaggagtatctcctgtccttccctgcaggcaaagctccagtccctgctggt gaggaggaaggagaactgggagaataccgacggaagctccttatgttcctggaaatttcc agctactatgacccaggccggctcatctgtgattttccttttgatggcctcttggaagaa cgtgccctcctgctgggacgcatggggaaacatgaacaagctctcttcatttacgtccac gtcctgaaagacacgaggatggctgaagagtactgccacaagcattatgaccaaaacaaa gatggcaacaaagatgtgtatctgtccctgctccggatgtacctgtcgccccccagcgtg cactgcctggggccgatcaagctggaactgctggagccacaagccaacctccaggccgcc ctgcaggtcctagagctgcaccacagcaagctggacaccaccaaggccatcaacctgytg cccgcgaacactcagattaacgacatacgcatctttctggaaaaggtcttagaagagaat gcacagaagaaacggttcaaccaagtgctcaagaaccttctccatgcagagttcctgagg gtccaggaagagcgcatcctgcaccagcaggtgaagtgcatcatcacagaggagaaggtg tgcatggtgtgtaagaagaagattgggaacagygcatttgcaagataccccaatggggtg gtcgtgcattacttctgctccaaagaggtcaacccggctgacacctga

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