Bos indicus (zebu cattle): 109566061
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Entry
109566061 CDS
T04792
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu01524
Platinum drug resistance
biu03430
Mismatch repair
biu05200
Pathways in cancer
biu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109566061 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109566061 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
109566061 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
109566061 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biu03400
]
109566061 (MSH6)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109566061 (MSH6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
HORMA
nSTAND_NTPase5
WPP
Motif
Other DBs
NCBI-GeneID:
109566061
NCBI-ProteinID:
XP_019825676
UniProt:
A0A6P5CI25
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Position
11
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AA seq
1361 aa
AA seq
DB search
MSRQSTLFSFFPKSPAVNNANKAPVRASSGSSAAAAATGASPSPGGDAAWNEAGPEPLAG
TTSRAEARNLNGGLRKSASPAVPASSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSHSKEAQKGGHFYSAKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEETEVGATYTSDKSEEENDIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDVGGSDVEFKPDTKEEASSDEISSGVGDSDSEGLDTPVKVAPKR
KRMVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSVPQNSEPQXHISGGCDDSN
RPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYEMYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEESSGHTRVYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSMDTKMILKSSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFXDKLNEDGGVMLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHAT
RPGAVFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCNPHAINDRLDAIEDLMVVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVLTLQTKSPEG
RFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLGNLIN
AEERRDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRGGDGPMCRPIIL
LPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQN
VAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKMTQSLRLFREVCLASERSTVDADAVHKLLTLIEEL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtttagcttcttccctaagtctccagccgtgaataatgcc
aacaaagcccccgtcagagcctcaagtggaagcagcgccgccgccgctgccaccggggcc
tccccttccccaggcggggatgcggcctggaacgaggccgggcctgagcccctagcgggt
accacgtcgcgggccgaggccaggaacctcaacggagggctgcggaagtcggcatcccct
gcggtccccgccagcagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccttggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaaggaaagtctgcccgagttcatgtacagttttttgatgacagcccaacacgg
ggctgggttagcagaaggctattaaagccatatacaggttcacattcaaaggaagcccag
aaaggaggtcatttttatagtgcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattaagaggcttgagttggcagtatgtgatgagccctca
gagccagaggaggaagaagagacggaggtaggtgccacttacacatcagataagagtgaa
gaggaaaatgacattgagagtgaagaggaagtgaggccaaaggtgcaaggatccagacga
agtagccgacaaataaaaaaacgaagggtcatatcagactctgagagtgacgttggtggc
tctgatgtggaattcaagccagacactaaggaggaagcaagcagtgatgaaataagcagt
ggcgtgggggacagtgatagtgaaggcctggacacccccgtcaaagttgctccaaagcgg
aagagaatggtaactgggaatggttccctcaagaggaagagttcaaggaaggaaatgcct
tcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgctttc
tctgtccctcaaaattctgaaccccaagyccacattagtgggggatgtgatgacagtaat
cgccccactgtctggtatcatgaaactttagagtggcttaaggaggaaaagagaagagat
gtgcacaggaggcggcctgatcaccctgattttgatgcatccacactctatgtgcccgag
gatttccttaattcctgtactcctgggatgaggaagtggtggcaaattaagtctcagaac
tttgatctggtcatattttataaagtggggaagttttatgagatgtaccacatggatgct
cttattggggtcagtgaactagggctggtattcatgaaaggcaactgggcccattctggt
ttccctgaaattgcatttggccgatactcagattccctggtccagaagggctataaagta
gcacgagtagaacagactgagaccccagaaatgatggaggcacgatgccgaaaaatggca
cacatatctaagtatgacagagtggtgcggagggagatctgtaggatcattacgaagggt
acacagacctacagtgtgctggaaggtgacccctcggagaactacagtaaataccttctt
agcctcaaagagaaagaagaggagtcttctggccacactcgcgtgtatggagtatgcttt
gttgatacctctctagggaggttcttcataggtcagttttcagatgatcgccattgttcc
aggtttaggactttagtggcacactatcctccagtacaagtcttatttgagaagggaaat
ctctcaatggatactaagatgattctcaagagttcattatcctcttctcttcaggaaggt
ctgataccgggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttayagacaagttaaatgaggacggtggggtgatgctaccccaggtgcttaaa
ggtatgacctcggagtcagattctattggattgacaccaggagagaagagtgaattagcc
ctctctgctcttggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatgttcccttggattctgacatggtccatgctaca
agacctggtgctgtctttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
aacaacttggagatttttctgaatggaacaaacggttctactgaagggaccttgttagag
aagattgacacctgccatactccctttggtaaacggctcttaaagcagtggctctgtgcc
ccactctgtaaccctcatgcgatcaatgatcgcctggatgccatagaagacctaatggtt
gtgcctgacaaaatctctgaggttgtagaccttcttaagaagcttccagaccttgagaga
ctcctgagtaaaattcataatgttgggtctcccctcaagagccagaaccacccagatagc
agggctataatgtatgaagaaaccacatacagcaaaaaaaagattattgattttctttct
gctctggaaggattcaaagtaatatgtaaaattatagggattatggaagaagtcattgat
gactttaagtctaaaatcctcaagcaggtccttactctgcagacaaaaagtcctgaaggg
cgctttcctgatttgacttcagaactgaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggactgattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagt
cgaattggctgtagaaccatagtttactggggaattggtaggaatcgttaccagttggaa
attccagagaatttcatcacccgtaatttgccagaagaatatgagttgaaatccaccaaa
aagggttgtaaacgatactggaccaaaacaattgagaagaagttgggtaatctgataaay
gccgaagaacggagagacgcatcattaaaggactgcatgaggcgactgttctataacttt
gataaaaattacaaggactggcaggctgctgtggagtgcatcgcagtgttggatgtgtta
ttgtgcctgaccaactacagtcgagggggtgatggtcctatgtgtcgtccaataattctg
ttgccagaagaagatactcctccctttctagaccttaaaggatcacgccatccctgcatt
acgaagactttttttggtgatgactttattcctaatgacattctaataggctgtgaggaa
gaggaggaggaaaatggcaaagcttattgtgtgcttgttactggaccaaatatgggaggc
aagtctacacttatgagacaggctggcctattagctataatggcccagatgggctgttac
gtaccagctgaagtgtgtaggctcacaccaattgatagagtgtttactagacttggtgcc
tcagacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgccagt
atacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtacc
gcaacattcgatgggacagcaatagcaaacgcagttgtgaaagaacttgctgagaacata
aagtgtcgtacgttgttttccacccactaccattcattagttgaagattattctcaaaat
gttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagc
caggagacaattaccttcctctataaattcattaaaggagcctgtccgaaaagctatggt
tttaatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaa
gcaagagaatttgagaagatgactcagtcactgcggttatttcgggaggtttgtttggct
agtgaaaggtctactgtggatgctgatgctgtccataagttgctgactttgattgaggaa
ttatag
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