Bos indicus (zebu cattle): 109566079
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Entry
109566079 CDS
T04792
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04517
IgSF CAM signaling
biu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109566079 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109566079 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
biu04812
]
109566079 (SPTBN1)
Cytoskeleton proteins [BR:
biu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109566079 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
109566079 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
109566079
NCBI-ProteinID:
XP_019825708
LinkDB
All DBs
Position
11
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIA
YIREQWAHLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQASALPQEHAESPDVQGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQSLLSQSHAHQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAXVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKQNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSLNAE
AIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPL
SPEPSTKVSEETESQQQWDTSKGEQVSQNGLPAEQGSPRMAETVDTSEMVNGAAEQRTSS
KESSPIPSPTSDRKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIXAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactacgacaacattgagatccagcagcagtacagcgat
gtcaacaaccgctgggacgtggaygactgggacaatgagaacagctccgcacggctcttt
gagcggtcgcgcatcaaggctctggcagatgaacgtgaagctgtgcaaaagaagaccttc
accaagtgggtcaactcccaccttgcccgggtgtcctgccggatcacagatctgtacact
gaccttcgggatggacggatgctcatcaagctactggaggtcctctctggagagagactg
cctaaacccaccaagggacgaatgcgcatccactgtctggagaatgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccacgacatcgtggat
ggaaaccaccggctgaccctcggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtagaaactgaagacaacaaagagaagaaatctgccaaggatgctttgctc
ttgtggtgccagatgaagacagctgggtaccccaacgtcaatattcacaatttcacaacc
agctggagggatggcatggccttcaatgcactgatacacaaacaccggcctgacttgata
gattttgacaaactaaagaaatccaatgcacactacaatctgcagaacgcctttaacctg
gcagagcaacaccttggcctcactaaactcttggaccccgaagatatcagtgtggaccat
cctgatgagaagtctattatcacttacgtggtgacttactaccactacttctcaaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgcttgacaacgctattgaaaca
gaaaaaatgattgaaaagtatgagtcccttgcctctgaccttctggagtggattgaacaa
actatcattattttgaacaatcgcaaatttgccaactcactcgttggggtccagcagcag
cttcaggcgttcaacacttaccgcactgtggagaagccccccaaatttactgagaagggg
aacttggaagtcctgcttttcaccattcagagcaagatgagggccaataaccagaaggtc
tacatgccccgggaggggaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcagaacacgagcgagaactggccctgcgaaatgagctcataagacaggagaaactg
gaacagctcgcccgcagatttgaccgcaaggcagctatgagagagacctggctgagcgag
aaccagcgtctggtgtcccaggacaactttggatttgaccttcctgctgttgaggccgcc
acgaaaaagcatgaagccattgagactgacatcgctgcatacgaggagcgcgtgcaggct
gtggtggctgtggccagggaactggaggcagagaactaccacgacatcaagcgcatcaca
gcacggaaggacaacgtcatccggctctgggagtacctgctggagctgctcagggcccgg
agacagcgcctcgagatgaacctggggctgcagaagatattccaggaaatgctgtacatc
atggactggatggatgaaatgaaggtgctgttattgtctcaagactatggcaaacacttg
ctcggcgtggaagacctgttacagaagcatgccctggttgaagcagacattggcatccag
gcagagcgggtgagaggtgtcaacgcttctgcccagaagtttgcaaccgacggggaaggt
tacaagccctgcgacccccaggtaatccgagacagggtggcccacatggagttctgttac
caagagctttgccagctggcggccgagcgccgggcccgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaggaggagggctggatccgggagaaggagaagatc
ctgtcctctgatgactacggcaaggacctcacaagcgtcatgcgcctgctcagcaagcac
cgggcattcgaggatgagatgagcggccgcagtggccacttcgagcaagccatcaaggag
ggcgaagacatgatcgccgaggagcacttcgggtcagagaagatccgggagcggattgcc
tacatccgcgagcagtgggcacacctggagcagctctcggccatccgcaagaagcgcctg
gaggaggcctcgctgctgcaccagttccaggcggatgctgacgacatcgatgcctggatg
ctggacatcctcaagatcgtctccagcaacgacgtgggccacgatgagtactccacccag
tccctggtcaagaagcacaaggacgtggcggaggagatcgccaactaccggcccaccatc
gactcgctgcacgagcaagccagcgccctgccccaggagcacgccgagtcccccgacgtg
cagggccggctggcgggcattgaggagcgctacaaggaggtggccgagctgacgcggctg
cggaagcaggcgctgcaggacactctggccctgtacaagatgttcagcgaggccgatgcc
tgtgagctctggattgacgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaggtcatccagcacagatttgagagcctcgaaccggagatgaacaac
caggcttcccgggtggcagtggtgaaccagattgcccggcagctgatgcacagcggccac
ccaagtgagaaggagatcaaagcccagcaggacaagctcaacacgaggtggagccagttc
agggagctggtggaccggaagaaggatgctctcctctccgccctgagcatccagaactac
cacctcgagtgcaacgaaaccaagtcatggatccgggagaagaccaaagtcatcgaatcc
acccaggacctgggcaacgacctggcgggtgtcatggccctgcagcgcaagctgactggc
atggagcgggacctcgtggccatcgaggcgaaactgagtgacctgcagaaggaggccgag
aagctggagtccgagcaccccgaccaggcccaggctatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagaccacgctgaagaaccgtgaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggacctggatgacttccagtcctggctctccagg
acacagacggccattgcctcggaggacatgcctaacaccctgaccgaggctgagaagctc
ctcacgcagcacgagaacatcaaaaacgagatcgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggccagacagatgcccagtacatgttcctg
cggcagcggctgcaggccctggacacaggctggaacgagctccacaagatgtgggagaac
aggcagagcctcctctcccagtcccacgctcaccagcagttcctgcgggacaccaagcag
gccgaagccttcctgaacaaccaggagtatgttttggcccatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggatttcatgaccaccatggatgcc
aatgaggagaaaatcaacgcggttgtggaaacgggccggaggctggtgagcgatgggaac
atcaactcggatcgcatccaggagaaggtggactccattgatgacagacacaggaagaat
cgcgaggcagccagtgagcttctgatgagactgaaggacaacagggatcttcagaaattc
ctgcaagactgtcaggagctgtctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttacgatgaagccagaaatctgcacagtaaatggttgaagcatcaagcctttatg
gcagaacttgcttccaacaaagaatggcttgacaaaatcgagaaggagggaatgcagctc
atttcagaaaagccagagacagaagccgyggtgaaggaaaaactcacaggtttacataaa
atgtgggaagtccttgaatccaccacacagaccaaggcccagcggctcttcgatgcgaac
aaagccgaactcttcacccagagctgtgcagatctggacaaatggctgcatggcctggag
agtcagattcagtctgacgactatggcaaagacctcaccagcgtcaacatccttctgaaa
aagcagcagatgctggagaatcagatggaggtgcggaagaaggagatagaagagctccag
agccaggcgcaggccctgagccaggaggggaagagcacggacgaggtggacagcaagcgc
ctcaccgtgcagaccaagttcatggagctgctggagcccctcaacgagaggaagcagaac
ctgctggcctccaaggagatccatcagttcaaccgggacgtggaggacgagatcttgtgg
gttggagagaggatgcctttggcgacctccacggatcacggccacaacctccagactgtg
cagttgttaataaagaaaaatcagaccctccagaaggagatccaggggcaccagcctcgc
atcgatgacatctttgagaggagccagaacatcatcactgacagcagcctcaacgccgag
gccatccggcagagactggctgacctgaagcagctgtggggcctcctcatcgaggagacg
gagaagcggcaccggcggctggaggaggcgcacagggcccagcagtactacttcgacgcg
gctgaggctgaggcgtggatgagcgagcaggagctgtacatgatgtccgaggagaaggcc
aaggatgagcagagtgccgtctccatgttgaagaagcaccagattctggaacaagctgtg
gaggactatgcrgagacggtgcaccagctctccaagaccagccgggccctggtggccgac
agccatcctgaaagtgaacgtatcagtatgcggcagtccaaggtggacaagctgtatgca
ggcctyaaggacctggccgaagagaggcggggcaagctggacgagagacaccggctgttc
cagctcaaccgcgaggtggacgacctggagcagtggattgccgagagggaggtggtcgcg
gggtcgcatgagctgggccaggactacgagcacgtcacgatgctccaagagcgattccga
gagttcgcccgggacacggggaacattgggcaggaacgcgtggacacagtcaaccacatg
gcagacgagctcatcaactccggacattcagatgccgctactatygctgagtggaaggat
gggctcaacgaggcctgggccgacctcctggagctcattgacaccagaacacagatcctc
gctgcctcctatgaactgcacaagttttaccacgacgccaaggagatctttgggcgcatc
caggacaaacacaagaaactccccgaggagctcgggagagatcagaacacagtggagacg
ttacagagaatgcacaccacctttgagcacgacatccaggccctgggcacccaggtgcgg
cagctgcaggaagacgcggcccgcctccaggcagcctacgcgggcgacaaggccgacgac
atccaaaaacgggaaaacgaggtgctggaagcctggaaggccctgctagacgcctgcgaa
ggccgcagggtacggctggtggacacgggagacaagttccgcttcttcagcatggtgcgc
gacctcatgctgtggatggaggatgtcatccggcagatcgaagcccaggagaagccccgg
gatgtgtcatctgttgaactattgatgaataatcatcaaggtatcaaagctgaaatcgac
gctcgtaatgacagttttacgacctgcattgaactggggaaatccctgctggcaaggaag
cactacgcatctgaggagatcaaggagaagttactgcagttgacagaaaagagaaaagaa
atgattgacaagtgggaagaccgatgggagtggttaagactgatcttagaggtccatcag
ttctcaagggatgccagtgtggccgaggcctggctgctcgggcaggagccctacctgtcc
agccgagagataggccagagcgtggacgaggttgagaagctcatcaagcgccatgaggct
tttgaaaagtctgcagcgacctgggacgagaggttctctgccctggaaagactgacgacg
ttggagctactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccgctc
tcccccgagccgagcacgaaggtttccgaggagactgagtcccagcagcagtgggatact
tcaaaaggagagcaagtttcccagaatggtttgccggctgaacagggatctccacggatg
gcagaaacagtggataccagcgaaatggttaacggcgctgcagaacagaggacgagctcg
aaagagtccagccccatcccctcccccacctctgatcgcaaagccaagactgctctccca
gcccagagtgccgccaccttgccagccaggacccaggagacaccttcggcccagatggaa
ggcttcctgaaccggaagcacgagtgggaggcccacaataagaaggcctcgagcaggtcc
tggcacaatgtttattgtgtcataaataaccaagagatgggtttctacaaagacgcaaag
acagctgcttcaggaattccctaccacagcgaggtccctgtgagtttgaaagaagccatc
tgtgaagtggcccttgattacaagaagaagaagcacgtgttcaagctcagactaaatgat
ggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggatccrggcc
atctcctctgccatctcctctgataaacacgaggtgtccgccagcacccagagcacgcca
gcatccagccgggctcagaccctgcccaccagcgtcgtcaccatcaccagcgagtccagt
cccggcaaacgggagaaggacaaagagaaagacaaagaaaagaggttcagcctttttggc
aaaaagaagtga
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integrated database retrieval system
