Bos indicus (zebu cattle): 109566086 Help Entry 109566086         CDS       T04792                                  Symbol CCDC88A Name (RefSeq) girdin isoform X1   KO K25392   girdin Organism biu  Bos indicus (zebu cattle) Brite KEGG Orthology (KO) [BR:biu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:biu03037]     109566086 (CCDC88A) Cilium and associated proteins [BR:biu03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    109566086 (CCDC88A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK_N APG6_N Motif Other DBs NCBI-GeneID:  109566086 NCBI-ProteinID:  XP_019825725 UniProt:  A0A6P5CJ76 LinkDB All DBs Position 11:complement(39582859..39699985) Genome browser AA seq 2025 aa AA seqDB search MENEVFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD MSQEEIEPLLKNMVLHLKRLIDERDEHSETIVELSEERDGLHFLPHASSSAQSPCGSPGM KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS DARSARMYRDELDALREKAVRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR STMDSAEGTTSKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS SKLSKTEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA LEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRSVESLKCASMKM AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEIGIYKESCIRLKELEKENKELVKRATID IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDRYKLLESKL ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSSP PAAGEDKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQ ILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENESV IKEREDLKSLYDSLVKDHEKLELLHERQASEYETLIAKHGTLKSAHKNLEVEHKDLEDRY NQLLKQKGQLEDLEKTLKVEQEKMLLKNKNHETVAAEFKKLCGENDRLNHTYNQLLKETE VLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEE ENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYK FYDPSPPRRRGNWITLKMRKLIKSKKDVNRERQKSLTLTPTRSDSSEGFLQLPHQDSQDS SSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMVLA GGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDTTS FEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNIQSRPPSH SSGEFSLLHEHEAWSSSGSSPVQYLKRQTRSSPALQHRTQESRAHHKTKTGSPGSEVVTL QQFLEESNKLTSMQLKPSSQENLLDEVMKSLSVSSDFLGKNKPVSCGLARSVSGKTPGDF HDRRTTKPEQFVRSGPQKAEDACFMSSSGKPTRGAQGKIKLIKETSLSRQSKDSNPYATL PRASSVISTAEGTTRRTSIHDFLTKDSRLPMSVDSPPATADSSITATSSEYCLHQWSSHT LHSPTSALGSQAQNYLATDKLQSPHTQARNSRTERSHLLNQTFAMINMSNDAFGRSATDS LESFTVAHPAQPFLSLNTELVSNISGLPPRPVTRVTDQASASLEKTAQKDNEQFSDHQSH GSINPQSSVDNSNLITPACLYPDDTEAALLVSEDNQTVWYEYGCV NT seq 6078 nt NT seq  +upstreamnt  +downstreamnt atggagaacgaggtttttactccccttctggagcagttcatgaccagccccttggtcact tgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctggatgaatatgtg gctttggtggatggggtattcttgaaccaagtcatgcttcaaattaatcctaaatcagag agtcagagagtaaataaaaaagtcaacaatgatgcttcacttagaattcataatctgtcc attttggtgagacagataaaattttattaccaggagactttgcagcagttgatcatgatg tcattgccaaatgtcttaatcattggcaaaaatcccttttctgaacaaggcacagaagaa gttaaaaaattgcttttgcttttactgggttgtgcagttcagtgtcagaaaaaagaagaa tttattgaaagaattcaaggtttagattttgatacgaaagcagcagttgccgcacatatt caagaggtaacccataatcaggaaaatgtgtttgatctacaatggatggaagtgactgat atgtctcaggaggaaatagaaccactcttgaaaaatatggtattgcatctaaaaaggctt atagatgagagagatgaacattcagagactattgtagagctctctgaagagcgggatggt cttcattttctaccccacgcctcttcatctgcacagtcaccttgtggttctccaggcatg aagcgaacggaaagtcggcagcatctgtcagtggagctggcagatgctaaggccaagata agaaggcttaggcaggaattggaggaaaagactgaacaattgttggactgtaaacaagaa ctagagcaaatggaaatagagctaaaaaggctgcagcaagagaacatgaatttgctttcg gatgctcgttctgcaagaatgtatcgagatgaattagatgcacttcgggagaaggccgtc agagttgataagcttgaaagtgaagtcagcagatacaaagagagactacatgatattgaa ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattggaaacaaaa accatgttggaagaccaattagaaggaactcgagctcgttctgataaattgcatgaatta gaaaaagagaatttacaactgaaagctaaactgcatgatatggaaatggaacgtgatatg gatagaaaaaagattgaagaactaatggaagaaaatatgactttggaaatggcacagaag caaagtatggacgaatcattacatcttggctgggaactggaacaaatatctagaactagt gaactttctgaagcaccacaaaaatccttgggccatgaggtgaatgaattgacatcaagt agattgttgaagttggagatggaaaatcagagtttgacaaaaactgtagaagagcttcgg agtactatggattctgctgaaggcaccacctccaaaatcctgaaaattgaaaaagaaaat caaagactaagtaagaaggttgaaatccttgaaaatgagattattcaagaaaagcaaagt cttcagaattgtcagaatttaagcaaggatctaatgaaggaaaaagctcagcttgaaaaa acgattgaaacacttcgagaaaattcagagagacagattaaaatattagaacaggaaaat gaacatctgaatcaaactgtgtcctccttaaggcagcgctcccagataagtgctgaagca agggtgaaagacattgaaaaagaaaacaaaattctccatgaatctatcaaagaaacaagt agcaagctaagcaagactgaatttgaaaaaaggcaaatcagaaaagaattggaacattat aaagaaaaaggagaaagagcagaagaacttgaaaatgagttgcatcatcttgaaaaagaa aatgaactgttacagaaaaagataaccaatttaaaaattacttgtgaaaaaattgaggcc ttagaacaagaaaattcagagctagaaagagaaaataggaagtttaaaaaaacactggat agctttaaaaacctcacttttcagttagaatccctggaaaaagagaattcccagcttgat gaggaaaacttagaacttcgaaggagtgtggaatctttgaagtgtgcaagcatgaagatg gctcagctacaactagagaataaagaactggaaagtgaaaaagaacaacttaagaaaggt ttagagctcatgaaagcatctttcaagaaaacagaacgcttagaagttagttatcagggt ttagatacagaaaatcaaaggctacagaaagctcttgaaaacagcaataaaaaaatccaa caattggaaagtgagctacaggacttagagatggaaaatcaaacattgcagaaaaaccta gaagagttaaaaatatctagcaaaagactagaacagctggaaaaagaaaataaatcatta gagcaagagacttctcaactggaaaaggataaaaaacaactggagaaggaaaataagaga ctccggcaacaagcagaaataaaagataccacattagaagaaaataatgtgaaaattgga aatttggaaaaagaaaacaaaacccttttcaaagagattggtatttataaagaatcctgc attcgtctgaaagaattagagaaagaaaataaagagcttgtgaaaagagcaactattgat ataaaaactttggttacattacgagaggatttggtgagtgaaaaattgaagactcaacaa atgaacaatgatcttgaaaaattaactcatgagcttgagaagatagggttaaataaagag cgactcttacatgatgagcaaagtactgatgaccgatacaaacttctggaatcaaaatta gaatccactctaaagaagtctcttgaaataaaagaagaaaaaattgctgctttagaagct cgactagaagagtccacaaattacaaccagcagttgcgccaagaactaaaaacagtgaaa aagaattatgaggctctcaaacagagacaggatgaggaaagaatggttcagagctctcct ccagctgctggtgaagacaagtgggagcgagaaagtcaagaaacaactagagagcttctg aaagttaaagacagattaattgaagttgaaagaaataatgctacactgcaagcagagaag caagcattgaaaactcaactgaaacaacttgaaacacagaacaataatttgcaggctcag attcttgcacttcagaggcagacagtatcattacaggagcagaataccactcttcaaaca cagaacgccaagcttcaggttgaaaattccacccttaattcccaaagtacctcacttatg aaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaatctgta atcaaagagcgagaagatctgaaatctctctatgattctctggtcaaagatcatgaaaag ctggaactcctacatgaacggcaggcttcagaatatgagactctgattgctaaacatgga actctaaagtctgcccacaaaaatcttgaggtggaacataaagaccttgaagatcgttac aatcagttactaaaacagaaaggacagttggaagatttggaaaaaacactgaaagtagaa caagaaaaaatgctgcttaaaaacaaaaaccatgagactgtagctgcagaattcaagaag ctttgtggtgaaaatgataggttgaatcatacatataatcagcttttaaaagagactgaa gttttacaaactgaccataaaaacttgaaaagtcttctaaataattcgaaactggaacaa acaagattagaagcggaattttcaaagttgaaggaacagtaccaacaattggacatcaca tccaccaagctaaataaccagtgtgagttgctaagccaacttaaaggaaatttagaagaa gaaaatcgacatctactagatcaaattcagacattaatgctacagaacagaacactattg gagcagaatatggaaagcaaggatcttttccatgttgaacaaagacagtacattgataag ttaaatgaattaagacgacaaaaggagaaattagaagagaaaattatggatcaatacaaa ttttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatgagaaaa ttgataaagtctaagaaagacgttaatcgggaacgacagaaatcactaactttaacacca acccgctcagactccagtgaaggatttcttcaactcccccatcaagatagtcaagatagt tcttcagtaggttcaaactctttagaagatggccaaactttggggaccaagaaaagcagc atggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagacaaaatg aaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtcctagca ggaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttcaacgggt aaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttttcaact gtcaactcttctacaggcttcagatccaagcagttggttaataataaagatactacatcc tttgaagacgtaagtccacaaggtattagtgatgattctagtacgggatcaagagttcat gcttcgagaccagccagccttgatagtggcagaacatccactagcaatagcaataataat gcttcactccatgaagtcaaagcaggtgcagttaatatccagagcaggccaccaagccac agcagtggggaatttagcctgcttcatgagcacgaggcgtggtccagcagcggtagcagt ccagtccagtacttgaaaagacagaccagatcaagcccagcgctccagcacagaactcaa gagagtcgggcacatcataagaccaaaactggttcccctggaagtgaagttgttactcta caacagtttttggaagaaagcaacaagcttacctcaatgcagctaaagccctcaagtcaa gagaatcttttagatgaagtaatgaaaagtttgtctgtctcttctgactttttgggaaaa aacaaaccagttagctgtggtctggccaggtcagtaagtggaaaaactccaggagacttc catgatagacggacaactaagcctgaacagtttgtgagatctggtcctcaaaaggctgaa gatgcctgtttcatgagttcttcaggaaagcctacacgaggcgctcaaggaaagataaaa ttaataaaagaaacttctctgtcacgacaatcaaaagatagtaatccctatgccacttta cctcgtgcaagcagtgttatctctactgccgaaggaactactcgaaggacaagcatccat gactttttgaccaaggacagtagactccctatgtcagttgattcaccaccagctactgct gatagcagcatcactgcgacatctagtgagtactgtttacaccagtggtcctctcataca cttcacagtccgacatctgctctaggttctcaagcacaaaattacttagctacagacaag ctccagtctccacatacccaggccagaaactcaagaactgaaaggtcacatcttctaaat caaacttttgccatgattaatatgtctaatgatgcatttggaagatcagctacagatagc ctagaatcctttactgtggctcatccagctcagccatttttatccctgaatacagaatta gttagtaacataagtgggttacctcccagaccagtcaccagagtaactgaccaggcttct gcttctttggaaaaaaccgctcagaaagataatgagcagttttctgatcatcagagccac ggtagcattaatccacaatcctctgtagacaatagtaatcttatcactcctgcatgcctc tatcctgatgacacagaagctgcattgttggtttctgaggataatcaaacggtttggtat gaatatggttgtgtatga

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