Bos indicus (zebu cattle): 109566160
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Entry
109566160 CDS
T04792
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109566160 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109566160 (POLR1A)
Enzymes [BR:
biu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109566160 (POLR1A)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109566160 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
109566160
NCBI-ProteinID:
XP_019825871
UniProt:
A0A6P5CIP0
LinkDB
All DBs
Position
11:50595694..50680082
Genome browser
AA seq
1717 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFTNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENADPTACEIQEELEQYTIKILQNNLPGSQGAQ
VKNVCESKSKLISVFWKVHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRRADQKDS
EPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPTT
EEEKDSWMAMDRSFLSQLPGQSLTDRLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYISTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFNREQYMELVFRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKES
PRLIPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHGIIEDSTHCGPRAVRAALNLPEAVSCD
EVQGKWQDAHLSKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLTSNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWHSKHS
NTLLRKGAFLNYSQKIQAAVKALNLEGTNQNGRSPETYQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIK
TPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFRIGEKQNKFRVYQLRFQ
FLPHAYYQQEKCTRPEDILHFMETRFFKILMEAIRKKNSKASAFRNVNTRKATQRDLDNA
GESERNRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEKEEEEK
EEEDIQEEGTGLKEGVQQEQEEGGWAPEESSLPGAPLMQPQKRARSREPQGAEAVERRAQ
AVRECHPFIEDYQYDTQGSLWCQVTLKLPLMKVNFDMSSLVASLAQGAVIYATKGITRCL
LNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEK
EIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQ
ATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagtgtgaagtccattacgaaccctcggtacctggac
agcctggggaacccctcggtaaatggcctgtatgatttagctctgggccccgctgactcc
aaagaggtgtgctccacctgcgtgcaggacttcaccaactgctctgggcacttgggccac
atcgacctcccgctcaccgtgtacaaccctctcctcttcgataaactctaccttttgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtggttcacctctta
ctgtgccagctgagagtcctggaagttggggccctgcaagcagtgtatgagctggagaga
attctctacaggtttctggaagaaaatgctgatcctactgcctgtgaaattcaggaagag
ctagagcaatatacaatcaaaatcctgcagaacaacctcccaggatcccagggtgcacaa
gtgaaaaatgtctgtgagagcaagagcaaactcatctctgtcttctggaaggtacatatg
actgctaagagatgtccccactgcaaaactgggcggtcagtggtccggaaggagcacaat
agcaaactgaccatcacgtacccggccatggtgcacaggagagctgaccagaaggacagt
gagccccagggaattgaggaagctcagatgggaaaacgaggatacctgacaccctccagt
gcgcaagaacatctcatagctctttggaaaaatgaagggttctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccaggttcaaccccagtatgttctttctggat
ttcttggtggtaccaccctcaaggtatcgccctgtcaaccgccttggggaccagatgttc
accaacgggcagacggtgaacttgcaggctgtcatgaaggacgtggttctgatccgaaag
cttctggcactgatggcccaagaacaggagctgccaagtgaggtggcagcacccactaca
gaagaggaaaaagactcctggatggctatggaccgatcttttttgagtcagcttccaggc
cagtccctcacagacagactttacaacatttggattcgccttcagagccacgttaatatt
gtgtttgatagcgagatggacaaattaatgatggaaaagtaccccggcattagacagatc
ctggagaagaaggatggtttgttccgaaagcacatgatggggaagcgcgtagactacgca
gcccgctcggtcatctgcccggacatgtacatcagtaccaacgaaattggaattcccatg
gtgtttgccacaaagctgacctaccctcaaccagtcaccccctggaacgttcaggaactg
aggcaggcggtcatcaacggccccaacgtgcaccctggagcctctatggtcatcaacgag
gatggcagtcgcacagccctgagcgcctcggacctcacgcagcgggaggccgtggccaaa
cagctcctgacaccagctacgggggcccctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaacggggacattctcctcctgaaccggcagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcgtcctccccgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctacaacgccgacttcgatggagatgagatgaacgcccactttccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcggggctgatccaagatcacatggtttcaggagcaaac
atgaccattcgaggctgctttttcaaccgggagcagtatatggagctggtgttccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcct
ctgtggacaggaaagcaggtcgtgtccacattgctcatcaacataatcccagaggaccat
atccccctgaacttgtcaggaaaggcgaagatcggtggaaaggcctgggtgaaggagtct
cctcggctcattcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcaga
gcaggggaactgctgtgcggggtgctggacaaggcgcactacggaagctccgcctacggc
ctggtccactgctgctacgagatctacggtggggagaccagcggcagggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttgggagtagaa
gacattttggtcaagccgaaggcggatgtcaggagacatgggatcattgaagactccacc
cactgtgggccccgggccgtcagggctgcgttaaacctgccagaggcagtgtcatgtgat
gaagtccaaggaaagtggcaggatgcccatctgagtaaagatcagagggattttaacatg
attgacttgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaaggcatgc
atgcccttcggcctacacagacagttcccagagaacaatctgcagatgatggtacagtct
ggagccaaaggttcaacagtgaacaccatgcagatttcgtgcctgctgggccagatcgaa
ttggaaggtcggagacccccgctcatggcatctggcaagtcgttgccctgcttcgagcct
tatgaattcacccccagggctggcggcttcgtgactggcaggttcctcactggcatcaag
cctccggagttcttcttccactgcatggccggccgagagggtctggtggacactgctgtg
aagaccagccgttccggatacctccagaggtgcatcatcaaacacctggaggggctggtt
gtccaatacgacctgacagtccgcgacagtgatggcagcgtggtgcagttcctgtacggg
gaggacggcctggacatccccaagacacagttcctgcagcctaagcagttccccttcctc
accagcaactatgaggtaataatgaaatcgaagcatctccatgaagttttatccagagcg
gatccccagaaagctctccgtcatttcagagccatcaaaaaatggcacagcaagcattcc
aacaccctcctgaggaaaggtgccttcttgaattactcccagaaaattcaggcagctgtg
aaagccttgaaccttgagggcacaaaccagaacggccgcagccccgagacttaccagatg
ctgaggatgtgggctgagttagatgaacaaagccggaggaagtaccagaagaaggcggct
ccttgtcccgaccccagtctgtctgtctggcgcccagacatctacttcgcatccgtgtca
gaaacatttgaaaagaagatggacgactacagctgcgagtgggcagctcaggcagagcgg
agttacgagaaatcggggctttctctcgacagtttgaggactctgctgcagctcaagtgg
cagcgctctctatgcgacccgggtgaggccgtgggcctgctggccgcccagagcatcggg
gagccctccacacagatgacgctcaacaccttccactttgccggcagaggcgagatgaat
gtcaccctgggcattccgaggttgcgggagatcctcatggtggccagttccaacatcaag
acgccgatgatgagtgtacctgtgttcaataccaagaaagcactgaagaaagtgaaaagc
ctgaagaagcaactcaccagagtgtgtctcggggaggtgttggagaaaattgatgtccag
gagtccttccgtataggggagaaacagaacaagttccgggtataccagctgcggtttcag
ttcctgccgcatgcgtactaccagcaggagaagtgcacgaggcccgaggacatcttacac
ttcatggaaaccagattctttaaaattctgatggaagccatcaggaagaagaacagcaaa
gcatcagctttcagaaatgtgaacacgcggaaagccacccagcgggatctagacaatgct
ggcgagtccgagaggaatcggggagagcaggagggcgacgaggaagaggaggggcacatt
gtggacgctgaagctgaggagggagatgctgacgcctcagatgccaaacgcaaggaaaaa
caagaggaggaggtcgactatgacagcgaggaggaggaggagaaggaggaagaggagaag
gaggaagaggacattcaggaggaagggaccggcctcaaagaaggcgttcagcaggagcag
gaggaaggcggctgggcccccgaagagagctcgctccccggtgcccccctgatgcagcca
cagaagcgcgcccgaagccgggagccccagggggccgaggcggtggagcgccgggcacag
gcggtgcgcgagtgccatccgttcatagaggactaccagtatgacacacagggcagcctg
tggtgccaggtgacgctgaagctccctctcatgaaagtcaactttgacatgagctccctg
gtagcgtccttggcccaaggagccgtcatctatgcaaccaagggtatcacaaggtgcctc
ctgaatgagaccaccaacagtaagaatgagaaggagcttgtcttaaacacagaaggcatc
aacctcccggagctgttcaagtacgccgaggtcctagatctccgccgtctctattccaat
gacatccatgccatggccagcacgtacggcatcgaggccgcactgcgagtgattgaaaag
gagatcaaggacgtgtttgccgtatacggcatcgccgttgacccccgccacctctcgctg
gtggctgactacatgtgcttcgagggtgtttacaagccactgaaccgctttgggatccgg
tcaaactcctcgccactgcagcagatgacgtttgagaccagcttccagtttctgaagcag
gccaccctcatgggatcccatgacgaactgaggtccccatcagcctgcctcgtggtcggg
aaggtcgtcaagggtgggaccggcctcttcgagctcaagcagccactaagatag
DBGET
integrated database retrieval system
