Bos indicus (zebu cattle): 109566248
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Entry
109566248 CDS
T04792
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109566248 (TIA1)
03041 Spliceosome [BR:
biu03041
]
109566248 (TIA1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109566248 (TIA1)
Spliceosome [BR:
biu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109566248 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
109566248
NCBI-ProteinID:
XP_019826023
UniProt:
A0A6P5CKM2
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Position
11:complement(70529811..70562869)
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AA seq
388 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFYEHRH
AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEIT
TEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIR
TNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFG
QIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQN
QIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQPWNQQGFNQTQSSPPWMGPNY
GVQPPPGQNGSMMPNQPAGYRVAGYETQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatgcctaagactctatacgttggtaacctttccagagatgtcacagaa
gctctaattctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatgtaaggacagccggaaatgatccatattgttttgtggagttttatgagcatcgtcat
gcagctgcagcactcgctgctatgaatgggcggaagataatgggtaaggaggtcaaagtg
aattgggcaacaactcccagcagtcaaaagaaagacacaagcagtagtaccgttgtcagc
acacagcgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattaca
actgaagatataaaagctgcttttgcaccatttggaagaatatcagatgcccgagtggta
aaagacatggcgacaggaaagtctaagggatatggctttgtctcctttttcaacaaatgg
gatgccgaaaacgccattcaacagatgggtggccagtggcttggtggaagacaaatcaga
actaactgggcaacccgaaagcctccagctccaaagagtacatatgagtcaaacaccaaa
cagctatcatatgatgaggtcgtaaatcagtccagtccaagcaactgtactgtgtactgt
ggaggcgtcacttcggggctgacagaacaactaatgcgtcagactttttcaccatttgga
caaataatggaaattcgagtctttccagataaaggatattcttttgttcggttcaattcc
catgaaagtgcagcacatgcaattgtttctgttaatggaactaccattgaaggccatgtt
gtgaaatgctactggggcaaagaaactctcgatatgataaatcctgtgcaacagcagaat
caaattggatatccacaagcttacggccagtggggccagtggtatgggaatgcacaacaa
attggccagtatatgcctaatggttggcaagtacctgcatatggaatgtatggccagccg
tggaaccagcaaggatttaatcagacacagtcttctccaccatggatgggaccaaattat
ggagtgcagccacctccaggacagaatggcagcatgatgcctaatcagcctgcagggtat
cgagtggcagggtatgaaacccagtga
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