Bos indicus (zebu cattle): 109566354
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Entry
109566354 CDS
T04792
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04512
ECM-receptor interaction
biu04514
Cell adhesion molecules
biu04820
Cytoskeleton in muscle cells
biu05144
Malaria
biu05205
Proteoglycans in cancer
biu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109566354 (SDC1)
04514 Cell adhesion molecules
109566354 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109566354 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
109566354 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
109566354 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
109566354 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109566354 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
biu04090
]
109566354 (SDC1)
00535 Proteoglycans [BR:
biu00535
]
109566354 (SDC1)
Membrane trafficking [BR:
biu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
109566354 (SDC1)
CD molecules [BR:
biu04090
]
Proteins
109566354 (SDC1)
Proteoglycans [BR:
biu00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
109566354 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
109566354
NCBI-ProteinID:
XP_019826218
UniProt:
A0A6P5CL43
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All DBs
Position
11:81049097..81073837
Genome browser
AA seq
311 aa
AA seq
DB search
MRRAALWLWLCALALRLQPALLHSVAVNMPPEDQDGSGDDSDNFSGSGAGALPDITSSHT
PSTWKDLGPVXTTATAPEPTSPDAIAASTTILPTGEQPEGGRAVLLAEVEPGLTAQKEAT
HPPSETTLHPTTHSXSTARATMAPGPXTSHPHRDVQPDHHETSAPTGRGRMEPHRPHVEE
GGPPATEKAAEEDPSTQIPVGEGSGEQDFTFDLSGENAAGAAGEPGSRNGAPEDPEATGA
TGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAY
QKPTKQEEFYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctgtggctctgcgcgctggcgctgcgcctgcagccggcc
ctcctgcacagtgtggccgtaaacatgccccccgaagatcaggatggctctggggacgac
agtgacaacttctctggctcgggcgcaggtgctttgccagatatcacctcatcacacacg
ccctccacctggaaggacctggggcccgtgaygaccacagccacggctccagagcccacc
agcccagatgccatcgccgcctccaccaccatcctgccaaccggagagcagcctgaggga
ggcagggcagtgctcctggcagaggtggagcctggcctcaccgcccagaaggaggccacc
cacccacccagtgagaccacactgcacccgaccactcacagcrtgtccacagccagagcc
accatggccccaggacccrccacctcccatccgcacagggacgtgcagcccgaccaccat
gagacctcggctcccacaggccggggccgtatggagccgcacaggccccacgtggaggag
ggaggtcctcctgccactgagaaggcggctgaggaggacccctccacccagatcccagtg
ggagagggctctggggagcaggacttcaccttcgacttgtccggggagaatgcggccggg
gccgcaggggaacctggctcacggaatggagccccggaggatcctgaggccacgggggca
acgggggcctcacagggcctcctggatcggaaggaagtcctgggaggggtcattgctgga
ggcctcgtggggctcatctttgccgtgtgcttggtgggtttcatgctgtaccggatgaag
aagaaggacgagggcagctactccttggaggagccaaaacaagccaacggcggggcctac
cagaagcccactaagcaggaggagttctacgcctga
DBGET
integrated database retrieval system