KEGG   Bos indicus (zebu cattle): 109566354
Entry
109566354         CDS       T04792                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04512  ECM-receptor interaction
biu04514  Cell adhesion molecules
biu04820  Cytoskeleton in muscle cells
biu05144  Malaria
biu05205  Proteoglycans in cancer
biu05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:biu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109566354 (SDC1)
   04514 Cell adhesion molecules
    109566354 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109566354 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    109566354 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    109566354 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    109566354 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:biu04131]
    109566354 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:biu04090]
    109566354 (SDC1)
   00535 Proteoglycans [BR:biu00535]
    109566354 (SDC1)
Membrane trafficking [BR:biu04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    109566354 (SDC1)
CD molecules [BR:biu04090]
 Proteins
  109566354 (SDC1)
Proteoglycans [BR:biu00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   109566354 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 109566354
NCBI-ProteinID: XP_019826218
UniProt: A0A6P5CL43
LinkDB
Position
11:81049097..81073837
AA seq 311 aa
MRRAALWLWLCALALRLQPALLHSVAVNMPPEDQDGSGDDSDNFSGSGAGALPDITSSHT
PSTWKDLGPVXTTATAPEPTSPDAIAASTTILPTGEQPEGGRAVLLAEVEPGLTAQKEAT
HPPSETTLHPTTHSXSTARATMAPGPXTSHPHRDVQPDHHETSAPTGRGRMEPHRPHVEE
GGPPATEKAAEEDPSTQIPVGEGSGEQDFTFDLSGENAAGAAGEPGSRNGAPEDPEATGA
TGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAY
QKPTKQEEFYA
NT seq 936 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctgtggctctgcgcgctggcgctgcgcctgcagccggcc
ctcctgcacagtgtggccgtaaacatgccccccgaagatcaggatggctctggggacgac
agtgacaacttctctggctcgggcgcaggtgctttgccagatatcacctcatcacacacg
ccctccacctggaaggacctggggcccgtgaygaccacagccacggctccagagcccacc
agcccagatgccatcgccgcctccaccaccatcctgccaaccggagagcagcctgaggga
ggcagggcagtgctcctggcagaggtggagcctggcctcaccgcccagaaggaggccacc
cacccacccagtgagaccacactgcacccgaccactcacagcrtgtccacagccagagcc
accatggccccaggacccrccacctcccatccgcacagggacgtgcagcccgaccaccat
gagacctcggctcccacaggccggggccgtatggagccgcacaggccccacgtggaggag
ggaggtcctcctgccactgagaaggcggctgaggaggacccctccacccagatcccagtg
ggagagggctctggggagcaggacttcaccttcgacttgtccggggagaatgcggccggg
gccgcaggggaacctggctcacggaatggagccccggaggatcctgaggccacgggggca
acgggggcctcacagggcctcctggatcggaaggaagtcctgggaggggtcattgctgga
ggcctcgtggggctcatctttgccgtgtgcttggtgggtttcatgctgtaccggatgaag
aagaaggacgagggcagctactccttggaggagccaaaacaagccaacggcggggcctac
cagaagcccactaagcaggaggagttctacgcctga

DBGET integrated database retrieval system