Bos indicus (zebu cattle): 109566764
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Entry
109566764 CDS
T04792
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04360
Axon guidance
biu04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
109566764 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
109566764 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
biu04040
]
109566764 (TRPC4)
Ion channels [BR:
biu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109566764 (TRPC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109566764
NCBI-ProteinID:
XP_019826929
UniProt:
A0A6P5CNW7
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Position
12:23537987..23811286
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AA seq
981 aa
AA seq
DB search
MNMAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIY
FKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNH
KKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNC
VECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFK
SEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSGNDLARLKLAIKYRQK
EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIVGLLFPVFSVCYLIAPKSPLGLF
IRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEI
KQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAE
ALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLY
FYYEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGA
TMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFN
VIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYV
AAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQGTKESSNSADSD
EKSDNEGSSKDKKKNFSLFDLTTLIHPRSAAIAAERHTISNGSALVVQEPPREKQRKVNF
VTDIRHFGLFHRRSKQHAAAEQNANQIFSVSEGVARQQAEGPLERSIQLESRTLASRGDL
NIPGLSEQCILVDHRERNTDSLGVQVSKRVCSFKSEKVVVEDTVPIIPKEKKHAKEEDSS
ADYDANLTDTITHEDYVTTRL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggcgcagttctattacaaaagaaatgttaacgccccctatagagaccgcatc
cctctcaggatagtccgagcagaatccgaactctcaccytccgagaaagcctacctaaat
gctgtggaaaagggagattatgcaagcgtcaagaaatccctagaagaagctgaaatttat
tttaaaatcaatattaattgcatcgatcctcttggaagaactgctcttctcattgcaatt
gaaaatgagaacttggaactcattgaactcctcttaagctttaacgtctatgttggagac
gccctattacatgctatcaggaaagaagttgtgggagctgtcgagctgttgctgaaccac
aaaaagcccagtggagaaaaacaggtgcctcccatactccttgataagcagttctctgaa
ttcactccagacattacacccatcattttggcagcccatacaaataattatgagataata
aaacttttggttcagaaaggcgtctcagtgcccagaccccacgaggtccgctgtaactgc
gttgaatgtgtgtctagctcagatgtggacagtctccgccactctcgctccagactcaac
atctacaaggccctggccagcccgtctctcattgccctgtccagtgaagacccttttctc
acagcctttcagctgagttgggagctccaggaactgagtaaggtggaaaatgaattcaag
tcagaatatgaggagctgtctcgacagtgcaaacaatttgccaaggacctactggatcag
acaagaagttcccgagagctggaaatcattcttaattaccgtgatgacaacagtctcctg
gaagaacaaagtggaaacgatctcgcgagactcaaattggccattaagtaccgtcagaaa
gagttcgtggctcagcccaactgtcaacaactgctggcgtctcgctggtacgacgagttc
cccggctggaggagacgacactgggctgtgaagatggtgacgtgtttcatagtaggactc
cttttccccgtcttctctgtgtgctaccttatagctcccaaaagccccctcggactcttc
atccgaaagccatttatcaagttcatctgccacacagcgtcctatttgacttttctgttc
ctgctcctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccacca
ccaaccatcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagagatt
aaacaaatgtgggatggtggacttcaagattacatccatgattggtggaatttaatggat
tttgtgatgaactccttatacctagcaacaatctccttgaaaatcgttgcatttgtaaag
tacagtgctcttaatccacgtgaatcttgggacatgtggcaccccacgctggtggctgaa
gctttgtttgctattgcaaatatattcagttccctgcgtctgatctcactgttcactgca
aattctcacctggggcctctgcagatatctctgggaagaatgctcctggacatcttgaag
tttctgttcatctactgcctcgtgctgctagcatttgccaatggcctaaaccagttgtac
ttctattatgaagaaacaaaagggttaagctgcaaaggcatacgatgtgaaaagcagaat
aacgccttttcaacgttatttgagacactccagtccctgttttggtcaatatttgggctc
atcaacttatatgtgaccaatgtcaaagcacagcatgaattcaccgaatttgttggtgcc
accatgtttgggacatacaacgtcatctctctggttgtcctgcttaacatgttaatagct
atgatgaataattcttaccaacttattgctgaccatgcggatatagaatggaaatttgct
agaacaaagctttggatgagttattttgaagaaggaggtacccttcctacccccttcaat
gtcatcccgagccccaagtctctctggtacctgatcaaatggatatggacacacctgtgc
aagaaaaagatgagaagaaagccagaaagttttggaacgatagggaggcgagctgctgat
aatttgagaagacatcaccaatatcaagaagttatgcggaacctggtaaagcgatacgtt
gccgcgatgattagagatgccaaaactgaggaaggtctgacagaggagaactttaaggaa
ctcaagcaagacatttctagcttccgctttgaagtcctggggttattaagaggaagcaaa
ctctccacggtccagtctgcccagggcaccaaggagtcttctaactccgcagactcggat
gaaaagagtgataacgagggtagcagcaaggacaagaaaaagaacttcagcctcttcgac
ctgaccaccctcattcacccgcggtcggcggcaattgccgctgaaagacacaccatcagc
aacggctccgccctcgtggtgcaggagcccccgagggagaagcagagaaaagtgaatttt
gtgaccgatatcagacactttggattgtttcacagacgatcgaaacaacacgccgccgcc
gagcaaaacgcaaaccagatcttctccgtttcagaaggggtggcccgccaacaagctgaa
ggacccctggagaggagcatccagctggagtcccgaactctagcttcacggggtgacttg
aacattccagggctcagcgaacagtgtatattggtagatcatcgagaaagaaatacagac
tcccttggtgtacaggtgagcaagagagtgtgttcattcaagtcagagaaggtggtggtg
gaggacacggttcccatcataccaaaggagaagaaacacgcgaaagaggaggactcgagt
gcagactatgatgcaaacctcacagacaccatcacccacgaagactatgtgaccacaagg
ttgtga
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