KEGG   Bos indicus (zebu cattle): 109566944
Entry
109566944         CDS       T04792                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein complementing XP-G cells
  KO
K10846  DNA excision repair protein ERCC-5
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    109566944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:biu03400]
    109566944
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109566944
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 109566944
NCBI-ProteinID: XP_019827249
LinkDB
Position
12:76890776..76982161
AA seq 1653 aa
MPNVAEAEGADDSGNGEHKSERRSPEESLQGAVQSFCTRASGEPLGPRGDGHYPWSCPVT
HTREKIYAICSDYAFLNQATSIYKTPNPARSCLSDSTSLSXANNSSRYIGISASTSDIIY
NEENSLENLSNSLGKLPLAWEIDKSEFDGVTTXFXHKSGNGKKQVSKKKTSDKKGRHQRE
WPQYSPLEDIKQRKVLDLRRWYCISRPQYKTSCGISSLVSCWNFLYSTMGAGNLPPISQE
EALHILGFQPPFEDIRFGPFTGNTTLMRWFRQINDHFRVKGCSYVLYKPHGKNKTAGETA
SGALSKLTHGLKDESLAYIYHCQNHYFCPIGFEATPVKANKAYRGPLTPQEVEYWILIGE
SSRKHPAIHCKKWADIVTDLNTQNPEYLDIRHLERGLQYRKTKKVGGNLHCIIAFQRLSW
QRFGLWNFPFGTIRQESQPPMHAHGIAKSESEDNISKKQHGRLGRSFSTGFHQDSTWKKM
SNISIWLNQALKGVRDRHGNSIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTL
AKRRHKKDLAASDSKTTTEKLLKTFLKRQVIKTALKSKREEALPSLTQVQREDDIYALPP
LQEKEKNSSEEEDEKEWQERMSQKQALQEEFFQNPHAVDIESEDFNSLPLEVKHEILTDM
KEFTKRRRTLFEAMPEESNDFSQYQLKGLLKKNYLNQHIENVEKEMNQQHSGQIQRQYED
EGGFLKEVESRRVVSEDTSHYILIKGVQAKKATEADSEPLPSCSEKHSGALDTKSPPCEK
LKPKKEPDASPPSPRTLLAMQAALLGSSSEDELEGKHRRPCBVKSPPAPAPEGSVSPLTL
LAIQRALDDDDEDLKLHAXVQTEGAGRRKPRPLVSSSDEEAVEEPEVRDGDRELLTEAPR
XASVTLTEEHVMKKSDEKEQTDSAPLLRTVFCQGSESSFPKEQMPSMHALKEPFQPSAES
TAQDGKDLVPLESTVVPHGDXPGLPGEPEQIPTPXTSPSSVSRSGTYTRVPEPQQALPPE
SKXAASVLSSDDETEPEKNPAPDVXGTASLQESSNTLSVAIDTVSDLGNEAPSSAPEHEN
FLKTIQEHESVGSAGQGLISVPESTEPTEVDSEDSESDGSFIEVQSINSSDELQAELQEA
SRPPSGQSEEEPTGTEKEEATGDSEGLPREISESEAVATEKHGETEKDAEDSLHEWQDID
LDELEALESNLLTQQNTLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEA
QCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLI
NLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLRKFSEWWHEAQENKKIRPNPYDT
KVKKKLRKLQLTPGFPNPAVADAYLKPVVBESKGSFLWGKPDLDKIREFCQRYFGWNRTK
TDESLFPVLKQLNVHQTQLRIDSFFRLAQQEKQEAKGIKSQRLNRAVTCMLRKEREEAAS
EVEAASVAMEKESEFLDEAKGKTQKRGTANRWKEPSSPKRKRLSDSKGGNESGGFLGEAY
LSQSSEASSGEDAEYFPAMGVQRAKAPGASRARSSAAQSAAQPASRRDGGTTTSSSSDDD
DGGRAKPXLVTARPVFGKKKGRRRSTRGRKWKT
NT seq 4962 nt   +upstreamnt  +downstreamnt
atgcctaacgttgcagaagcagaaggggcagatgattctggaaatggtgagcacaaatcc
gagagaaggtctcctgaagagagcctgcaaggtgccgttcaatctttctgcacccgtgcc
tccggagaacccctgggtcccagaggagatggtcattatccgtggagctgtccagtgacc
cacactcgggagaagatttacgccatctgctcagactatgcctttctcaaccaggccacc
tcaatctataaaactccaaatccagcccgttcttgcctctcygatagtacctctttatct
kcggcaaataattcctcaaggtacattggcatctcagccagtacgtcggacatcatctac
aatgaagaaaacagcttggagaacttatccaacagcctgggcaagctacctctcgcatgg
gaaattgataaatctgaatttgatggagtgaccacgnnatttraacacaaatcaggcaat
ggaaagaagcaagtttctaagaaaaaaacttcagataagaaaggaagacatcaaagggag
tggcctcagtattctcctcttgaagatattaagcagcggaaagtattagacctcagacga
tggtactgcataagccgaccgcaatataagacttcttgtggcatctcctcattagtttct
tgttggaatttcttgtatagcacaatgggagctggaaatcttccacccatcagccaggaa
gaagctttacatattttgggctttcagcctccatttgaagatattaggttcggccccttc
actggaaatacgacacttatgaggtggtttagacaaattaacgaccacttccgtgtaaaa
ggatgctcatatgttctatataagcctcatgggaagaataaaacagctggagaaactgca
tctggggccttgtcgaagttaactcatggattgaaagatgaatcgttagcttatatctat
cattgccaaaatcattatttttgtccaattggctttgaagcaacccctgtcaaggcgaat
aaagcatataggggtcccctcacaccacaggaagtagaatattggatcttaattggagaa
tcaagtagaaaacatcctgctattcactgtaaaaaatgggcagacattgtcactgatcta
aacactcaaaatccagaatatctagatatccggcacttagagagggggctgcagtaccga
aagacaaagaaggttggaggaaacttgcattgcatcatagcattccagagacttagctgg
caaagatttggcctttggaactttccgtttggaactattagacaggaatcacagcctcca
atgcatgcccatggaattgccaaatctgagagtgaggacaatatctccaagaagcagcac
gggcgcctgggccggtcttttagtactggtttccatcaggactcaacatggaaaaagatg
tccaatattagcatctggttaaaccaggctcttaaaggagtccgcgatcgccacgggaac
tccatagaaaacgcccatcttctcactttgttccaccgactctgcaaactcttatttttc
cgaattcgtcctatttttgtgtttgatggggatgctccactattgaagaaacagacattg
gctaagagaaggcataaaaaggacttggccgccagtgactccaaaacaactacagagaag
cttttgaaaacatttttgaaaagacaggttatcaaaaccgccttaaaaagcaaaagggag
gaagctcttcccagtcttactcaagttcagagagaagatgacatctatgctttgccacct
ttacaagagaaagagaaaaacagttcagaagaggaggatgaaaaagaatggcaagaaagg
atgagtcagaaacaggcattacaggaagagttctttcagaatcctcatgcagttgacatt
gagtctgaagatttcaacagcctgccccttgaagtaaagcatgaaatcttgactgatatg
aaggaatttactaagcggagaagaacattatttgaagcgatgccagaggagtccaatgac
ttttcacagtaccagctaaaaggcttgcttaaaaaaaactatctaaaccaacacatagaa
aacgtcgagaaggaaatgaatcaacaacattcagggcaaatccaaaggcagtatgaagat
gaaggaggctttctgaaggaggtggagtccaggagagtggtctctgaggacacttcccac
tacatcttgataaaaggtgttcaagctaagaaagccacagaagcggattcagagcccctt
ccttcttgcagcgaaaagcatagtggggctttagacacgaagtcacctccgtgtgaaaaa
ctgaagccaaagaaagagcccgaygcctcccctccctcccckcgaaccttgctggccatg
caggctgccctgctgggcagtagctcagaagacgagctggagggcaagcatcgcaggccr
tgcratgtgaagagcccacctgctcccgcccctgagggttctgtgtccccgctgaccctc
ttggccattcagagagctctcgatgacgaygatgaagatctgaaattgcatgctrgtgtg
cagacagagggagcaggcaggagaaaaccaagaccgctggtgagcagttctgatgaggaa
gctgtggaagaacctgaagtaagagatggagacagagagctgttgacagaagcgcctcgt
gytgccagtgtgaccctcacagaggagcatgtgatgaaaaagagtgatgaaaaagagcag
acagactcagctcctttactgcggactgtcttttgtcaaggcagcgagtctagctttcca
aaagaacagatgccatctatgcatgcgttgaaggaaccctttcaacccagtgctgagtct
acagctcaggatggaaaagatctggttcctttagaaagcaccgtggtgccacacggggat
gygcctgggctcccgggggaaccagagcagataccaacacctcygacaagtccaagttct
gtgtcaaggagtgggacatacaccagagtgccygagccacagcaggctcttccacccgag
agtaaasgtgccgcctctgttctctcaagtgatgacgaaacagaacctgaaaaaaatcct
gcccctgacgtcgytggcaccgccagtttgcaagaatcgagtaacaccctgagtgtcgct
atagacacagtaagtgacttaggaaatgaggcacctagcagtgccccagagcatgagaat
ttcttgaaaaccatccaagaacatgagtccgttggatctgcaggccagggtttgatttcg
gtgccagagtccacggaaccaacagaagtagactccgaagacagtgaatcygacggaagt
ttcattgaagtgcagagtataaatagcagtgatgaacttcaagctgagttacaggaagct
tctagacctccctctggacaaagtgaggaggaaccgacaggaactgagaaggaagaagcc
actggtgactccgagggcctcccaagagagatttctgagagtgaggccgtggctactgaa
aaacacggagagactgagaaagatgcagaggattcgctccatgagtggcaagacattgat
ctggatgarctggaagctctggagagcaacctcttaacccagcagaatacactgaaagct
caaaaacagcagcaagagcgggtggccgctactgtgacggggcagatgttcttggaaagc
caggaactgctccgcctcttcggcatcccctayatcgaggctcccatggaagcagaggct
cagtgcgccatcctggatctgaccgaccagacttccggaaccatcaccgacgacagtgat
atttggctgttcggggcacggcacgtctacaaaaactttttcaataaaaacaagtttgta
gaatattaccagtatgtggactttcacaaccaattaggattggaccggaacaaattaata
aatttggcctatttacttggaagtgattatacagaaggaataccaactgtgggttgtgtt
accgccatggaaattctcaacgaattccctggacayggcctggaaccactccgaaaattc
tcagagtggtggcacgaagcccaggagaataagaagataaggccgaatccatatgacacc
aaagtgaaaaaaaagttgcgcaagttgcaactcacacctggcttccctaacccggccgtg
gcggacgcttacctcaagcctgtggtgracgagtccaaggggtcgtttctgtggggcaaa
cccgacctcgacaagatcagagaattttgtcagcggtattttggctggaacaggacgaag
acagatgaatctctgtttcctgtgttaaagcaactgaatgtccatcagacacagctccga
attgattctttctttagattagcccaacaggagaaacaggaggctaagggtattaagagc
cagagacttaacagagctgtgacatgtatgctgagaaaagaaagagaagaagcagccagt
gaagtagaagcagcttctgttgccatggagaaagagtctgagttccttgatgaggcgaaa
ggaaaaacccagaagagaggcacagcaaatagatggaaagagccatccagcccgaaaaga
aagaggctttcggattctaaaggagggaacgaaagtggtgggtttttgggggaggcctac
ctctcgcagtcatcygaggcctcttcaggtgaggatgcggagtacttccctgcgatgggc
gtgcaaagggcgaaagcgcccggggcgtccagagcccgctcgtcagctgcacagagcgca
gcacagcctgcttcccggagggacggcgggaccaccacgagcagctccagcgacgacgat
gatggggggagggcgaagcccrtgctggtgaccgccaggcctgtgtttgggaagaaaaag
gggaggcgcagaagcacgagaggaaggaagtggaaaacctaa

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