Bos indicus (zebu cattle): 109566971
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Entry
109566971 CDS
T04792
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
biu04515
]
109566971
Cell adhesion molecules [BR:
biu04515
]
Cadherins
Protocadherins
109566971
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
109566971
NCBI-ProteinID:
XP_019827271
UniProt:
A0A6P5CMD6
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Position
12:complement(9119068..9121674)
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AA seq
740 aa
AA seq
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MTYCIDLATVQLPGPSXELFQGNKTRRPGDCGLAPVEAYLHTFLSAVSLVLGRFRLINSS
LRXGDKMTVWDAGLDRERLCGQAPQCVLAFNVVSFSQEQFLLVHLEVLVRDINDHAPRFP
RAQIPVEVSEGAAVGTRIALEVPVDEDVGANGLQSVCLDEPHSPFRVELQTRADGAQCAD
LVLLQELDRESQATYSLGLVAQDGXXXXXSATAALSVRVLDANDHGPAFPQGAVAEVELA
EDAPVGSLLLDLDAADPDEGPNGDVVFAFGSRTPPEARRLFRLDPRSGRLTLAGPVDYER
QDTYELDVRAQDPGPGPRAATCKVIVRLRDVNDNAPDISITPLAAPGAPAASPFPAAAAA
LGGAEATSSTGPGTPEAGAVSLVREGAERESLVALVSTSDRDSGANGQARCALYGHEHFR
LQPAYVGSYLVVTAASLDRERISEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFT
RPVYEVSVRENNPPGAYLATVAARDXLNGQVAHRLLEAEVGLAGGAXATYVSGDPVTGRL
RARRSFNLEELARLQLGLEALDGGSPPLRGRATAELQMQGQDERAPRLVTPELVDGSALL
PPPWDASLCSLATRQQARDADKGLDAQLTHLQLRGDGGPGRAIAAASAAGWPCGARARCF
RYPRFLHHLADKWCWCHRRRRRRTGKGRAERLLELSVAVVGFSASPCSLLLVAGVTLLGP
ARAAEEEALGARPELVPLEQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgacctactgcattgacctggccactgttcagctccccgggccctcctkcgagctcttt
caagggaacaagacccggaggccaggagactgtggattggctccggtggaggcttatttg
catacttttctctctgcagtctccctggtactgggtcggttccgcctgataaacagctcg
ctgcgctagggcgacaagatgaccgtctgggacgcgggcctggaccgagagcggctgtgc
ggccaggcccctcagtgcgtgctggccttcaacgtggtcagcttctcccaggagcagttc
ctgctggtgcacttggaggtgttggtgagggacatcaacgaccatgcgccgcgcttcccc
cgggctcagattcccgtggaggtgtccgagggcgcggcggtgggcacgcgcatcgccctg
gaggtgcccgtggacgaggatgtgggcgccaacgggctgcaaagcgtgtgcctggacgag
ccccacagccccttccgcgtggagctgcagacgcgcgcggacggtgcccagtgcgccgac
ttggtgctgctgcaggagctggaccgcgagagccaggccacctacagcctggggctggtg
gcccaggacggcnnnnnnnnnnnnnnntccgccacggccgccctcagcgtgcgcgtgctg
gacgccaacgaccacggcccggccttcccgcagggtgccgtggcggaagtggagctggct
gaggacgcgcccgtgggctcgctcctgctagacctggacgcggcggaccccgacgagggc
cccaacggcgacgtggtgttcgccttcgggtcccgcaccccgcccgaggcgcgccgcctc
ttccgcctggacccgcgctccggccgcctcaccctggcggggcccgtggactacgagcgc
caggacacttacgaactggacgtgcgggcgcaggaccccggccccgggccccgcgccgcc
acctgcaaggtcatcgtgcgcctccgcgacgtcaatgacaacgctccggacatctccatc
accccgctggccgccccgggcgcgcctgctgcctcgcccttccccgccgccgccgccgct
cttgggggagcggaggccacctcgtcgaccgggcctgggacgccggaggcgggcgccgtc
tcgctggtgcgggagggggcggagcgcgagagcctggtggcgctggtcagcacctcggac
agggactcgggcgccaatgggcaggcgcgttgcgccctctacgggcacgagcacttccgg
ctgcagccggcctacgtgggcagctacctggtggtgaccgcggcgtccctggaccgcgag
cgcatctccgagtacaacctgacgctggtggccgaggaccgcggcgcgcccccgctgcgc
acagtgcggccctacacggtgcgcgtgggcgacgagaacgacaacgcgccgctcttcaca
cggccagtctatgaggtgtcagtgcgcgagaacaacccgccgggggcctacttggccacg
gtggccgccagggacnncctcaacggccaggtcgcccaccggctgctggaggctgaggtg
ggcctggctgggggcgccntggccacctacgtctcgggggaccccgtcacggggcggctg
cgcgcacgacggagttttaacctcgaggaactggccaggctgcagctagggctggaggcg
ctggacggcggctcgccgccgctgcgaggccgggccacggcggagctgcagatgcagggc
caggacgagcgcgcgccccggctggtgaccccggagctcgtcgatggctcagccctgctg
cctccgccgtgggacgcgtccctgtgctccctggcgacccgacagcaggccagggacgcg
gacaaaggccttgacgcgcagctgactcatctccagctccgcggcgacggcggccccggg
agagctatcgctgcagcgtcggcggccggctggccctgcggcgctcgggcgcggtgcttc
cggtacccgcgcttcctgcaccacctggcggacaaatggtgctggtgccaccgccggcgc
cgccgccgaaccgggaaggggcgcgcagagcggctccttgagctctccgtggccgtggtc
gggttctcggccagcccttgcagccttctcctggtggccggggtcacgttacttggcccc
gcccgggccgcggaggaggaagctttaggagcgcggccggagctggtgccactcgagcag
tga
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