Bos indicus (zebu cattle): 109566999
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Entry
109566999 CDS
T04792
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109566999
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
biu04091
]
109566999
Lectins [BR:
biu04091
]
C-Type lectins
Lecticans
109566999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
109566999
NCBI-ProteinID:
XP_019827294
UniProt:
A0A6P5CPX0
LinkDB
All DBs
Position
12:complement(22853324..22969099)
Genome browser
AA seq
2128 aa
AA seq
DB search
MQATGTPRVTARTRPAGNPTKSPPTPPTPSGLVLLLLLSLVSRVRAQPPDPGRALLSPDL
AGVAGVPAEEAIVLANRGLRVPFGREVWLDPLQDLVLQVQPGDRCAVTVLDNDALAQRPG
RLSPKRFPCDFGAGEVRYSHLGARSPSRDRVRLQLRYDAPGGAAVLPLVLEVEVVFTQLE
VVTRNLPLVVEELLGTSNALDARSLEFAYQPETQECRVGILPGLGALPRYGELLHYPQVP
GSASEGDSQEPLLMDCTAFQELGVRYRHTAPSRSPNRDWVPMVVELRSRGSPVGSPALKR
EHFQVLVRIRGGAENTAPKPSFVAMMMMEVDQFVLTALTPDMLAAEDAECAPDLLIFNLT
SPFQPGQGFLVSTDDRSLPLSSFTQRDLHLLKIAYQPPSEDSDQERLFELELEVVDPEGA
ASDPFSFMVVVKPMNTLAPVVTRNTGLILYEGQSRPLTGPAGSGPQNLVISDEDDLEAVQ
LEVVAGLRHGHLVLLGASNGNSAPKTFTVAELAAGRVVYHHDDKDGSLSDNLVLRMVDGG
RRHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGETVPILPQALSATDMDSEDSLLLFVL
ESPSSTAGHLLLRQTHPPQGEEMLLGSPWRKQGIFYEKTVTQWRQRDITEGRLFYRHSGP
HSPGPVIDQFTFRVQDNHDPPNKSGLQRFMIRIHPVDRLPPELGSGCPLRMVVQESQLTP
LRKKWLRYTDLDTDDRELRYMVTQPPMDTDENHSPAPLGTLVLTDDPSVVVAHFTQAQVN
HHKIAYRPPDQELGVAARVAQFQFQVEDRAGNVAPGTFTFYLQPVDNQPPEILNTGFTVQ
EKGHHILSETELGVNDVDTDVAHITFTLIQVPTHGHMKLSGQVLHVGGIFHLEDIKQGQI
SYAHNGAESLTDSCSLEVSDRHHVVPITLRVNVRPMDGELPMLSLPAGTLGSYLDVLENG
ATEITASVIRGTNGDADDLMLTFLLEDPPLYGEILVNGVPAEQFTQRDILEGSVVYAHTS
GEIGLLPKEDSFNLSLSDMSQEWRIGGNTIQGVTVWVTILPVDSQAPEISVGEQFIVLEG
DKSAITSMHISAEDMDSLNDDILCTIVIQPTSGYVENISPAPGSEKSRAGIAVSAFTLKD
LRQGHINYVQSVHKGVEPVEDRFIFRCSDGINFSERHFFPIVIIPTNDEQPEIFIREFLV
MEGMSLVVDTPILNAADADVPPDDLTFTITKFPTHGHIMNQLINGTVLVESFTLDQIIES
SSIIYEHDDSETQEDSFVIKLTDGKHSVEKTVLIMVIPVDDETPRMAINNGLEIEIGETK
IINNRILMATDLDSEDKFLVYIIRYGPGHGLLQRQTPTGVFENITLGMNFTQDEVDSNLI
QYVHFGQEGIRDLIKFDVTDGINALIDRYFYVSIGSPDIVFPDVISKGVSLKEGGKVTLT
TDLLSTSDLNSPDENLVFTITRAPMRGHLESTDQPRVSITSFTQLQLAGNKIYYIHTADD
EVKMDSFEFQVTDGRNPVFRTFRISISDVDNKKPVVTIHNLVVSEGEKKLITPFELTVED
RDTPDKLLKFTVTQVPVHGQLLFNNTRPAMIFTKQDLNENLISYRHDGTESSEDSFSFTV
TDGSHTDFYVFPDTVFETRRPQVMKIRILAVDNRVPQIVVNKGASTLRTLATGHLGFMIT
SKVLKAEDRDSLHVSLRFIVTEAPRHGYLLNLGQGNHSATEFTQADIDDMKICYVLREGA
NAVSDIFQFTVEDGGGNKLTKQHFRLNWAWISFEKEYYLINEDSKFLDVMLKRRGYLGET
SFISIGTRDGTAKKDKDFKGKAQRQVQFNPGQTRATWRVRILSDGAHEQSETFQVVLAEP
VLAALEFPAVTTVEIVDPGDESTVFIPQSEYSIEEDVGELFIPIRRSGDVSQELMVVCYT
RQGTARGTVPTSVLSYSDYISRPEDHTSVIRFDKDEREKMCRVVIIDDSLFEEEETFHVL
LSMPMGGRIGSEFPGAQVTIKPDKDDEPVFYFGDVEYSVDESAGSVEVRVWRSGTDLSQA
SSVTVTSQKTDPPSADAGTDYVGISRNLDFAPVNPDSIXXXXXXDTSCPNKLVLRMPMNA
ALGDPSKATVTINDSVSDCECLLTDDDK
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaccgggacccccagggtcaccgcgcgcacgcgccccgcaggaaaccccacc
aaatctccaccgacgcctccgacgccgtccgggctggtgctgctgcttctcctgtcactg
gtaagccgcgtccgggcacagccacctgaccccggccgggccttgctgtccccggatctc
gcgggggttgcaggggtccccgccgaagaagccatagtgctggcgaaccgcgggctccgg
gtgcccttcggccgtgaggtctggctggatccgttgcaggacctagtgctgcaggtgcaa
ccgggggatcggtgcgcagtgaccgtgctagacaatgacgcgctggcccagcggcccggc
cgcctgagtcccaagcgcttcccctgcgacttcggcgcgggagaggtgcgctactcgcac
ctgggcgcgcgcagcccgtcgcgggatcgagtccggctgcagctgcgctacgacgcgccg
ggtggggcggccgtgctccccctggtgctggaggtggaggtggtcttcacccagctggag
gttgtgacgcgaaacctgcccttggtcgtggaggagctgctggggaccagcaatgccctg
gacgcgcggagcctggaattcgcctaccagcctgagacccaggagtgtcgcgtgggcatc
ctgcctggtttgggcgcgctgcctcgctacggggaactccttcactacccgcaggtcccg
ggctcggccagcgagggggacagccaggagcccctcctgatggactgcacagcattccag
gaactgggcgtgcgctaccgccacaccgccccaagtcgttctccgaacagggactgggtg
cccatggtagtggagctgcgatcgcgagggtctcctgtgggcagcccggctttgaaacgc
gagcacttccaagtgctggtgagaatccgaggaggggctgagaacaccgcccccaagccc
agctttgtggccatgatgatgatggaggtggaccagtttgtcctgaccgccctgacccca
gacatgctggcagcggaggatgcggagtgtgccccagacttgctgatcttcaatctcacc
tctccattccagcccggccagggcttcctagtgagcactgacgaccgcagtttgcccctc
tcctccttcactcagagggatttgcacctcctgaaaattgcctatcagcccccctctgaa
gactctgaccaggagcgtctctttgaactcgagctggaagtagtggacccagaaggcgct
gcctctgatcctttttccttcatggtagtggtgaagcccatgaacacactggctccagtg
gtcacccggaacactggtctcattctctacgagggccaatctcggcccctcactggccct
gcaggcagtggaccacaaaatttggtcatcagtgatgaagacgacttagaggccgtacag
ctggaggtggtggccgggctccggcacggtcacctcgtccttctgggtgcctccaatggc
aactctgcccctaagacctttactgtagccgagctagcagctggccgagtggtctaccat
cacgatgacaaagatggctcactaagtgacaacctcgtgctccgaatggtggayggagga
cgcaggcaccaggtgcagtttctgttccccatcaccttagtgcctgtggatgaccagcca
ccagtcctcaatgccaacacagggctgacgctggcagagggtgaaaccgtgcccatcctg
ccccaagctctgagtgcaactgacatggactcagaggactctttgctgctttttgtgctc
gagtcaccttcctccacagcagggcatctgcttctccgccagacccatcctccccaaggg
gaggagatgcttcttgggagcccttggagaaaacagggaatattctatgagaaaacagtg
acacagtggcggcagcgagacataacagaggggagacttttctacaggcactctgggccc
cacagtcctgggccagtgattgaccagttcacatttcgtgtccaggataaccatgacccc
cctaataagtctgggctacagaggttcatgatacgcattcatcccgtggaccgcctccct
cccgagctgggcagtggctgtccccttcggatggtggtacaggaatcccagctcacacca
ctgaggaagaagtggctacgctacacggacctggacacggatgaccgagaactccgttac
atggtgacccagcccccaatggacacagatgaaaaccactcaccagccccattgggcacc
ttggtcctgaccgatgatccttcggtggtagtggcccattttacacaagcgcaggtcaac
caccataaaattgcttacaggcctccagatcaggagctgggagtggctgcccgagtggcc
cagtttcaattccaggtggaggaccgagctgggaacgtggctccaggcaccttcaccttt
tacttgcagccagtggacaaccagccacccgaaatcctcaacactggcttcaccgttcag
gagaagggccatcacatcctgagtgagactgagttgggtgtgaatgatgtggacactgat
gtggcccacatcaccttcactctcatacaggtgcccacacatggccacatgaagctgtct
ggacaggtcctgcatgtcggtgggattttccacttggaggacataaaacagggtcagatt
tcctacgcccataatggggctgagtctctgaccgatagctgttccttggaggtcagtgac
agacaccacgtggtacccatcactctcagagtgaatgtccggccaatggacggtgagctg
cccatgctgagccttcctgcaggcactctggggtcctatctagacgttttagaaaacggg
gctactgaaatcacggccagtgttatcagggggaccaatggggacgctgatgatttgatg
ttgactttcctcttggaagatccacccctatatggagaaatcctggtcaatggagttcca
gcagagcagtttacccaaagagacatcttggagggctccgtcgtctacgctcacacaagc
ggggagataggtctcttgcccaaagaagactctttcaacctgagtctgtcggatatgtct
caagaatggagaataggtggtaacactatccaaggagtgaccgtgtgggtgaccatcctc
cctgttgacagccaggccccagaaatctctgtaggtgagcagtttatcgttctggaaggc
gataaaagtgctataacctcaatgcacataagtgctgaagacatggattctctcaatgac
gacatcttgtgcaccatcgtcattcagcccacctcaggttacgtggagaatatctctcca
gcccctggctctgaaaaatcgagagcaggaattgctgtaagtgctttcactctgaaagat
ctcaggcaaggtcatataaactacgtccagagtgtccataaaggagtagaaccggtggaa
gacagatttatatttcgctgttctgatggcattaacttttcagagagacattttttcccc
attgtaatcattcccaccaacgatgaacagccagaaatattcatcagggaatttttggtg
atggaaggcatgagtttggtggttgatacacccatcctcaatgccgctgatgctgatgtt
cccccagatgacttaactttcactatcaccaagtttcccacccacggtcacatcatgaac
cagctgataaatggcaccgttttggtggaaagcttcaccttggaccagatcatagagagt
tccagcatcatttatgagcatgatgactctgagactcaggaagacagtttcgtgattaaa
ctcacagatggtaagcactctgtggaaaagacagtcctcatcatggttattcctgttgat
gacgagacccctaggatggccatcaataatggactggaaatagaaatcggggaaaccaaa
attatcaacaacagaatattaatggcaactgatttagattctgaagacaaattcttggtt
tacattattcgttatgggccgggacatggcttattacagagacaaacacctacaggtgtc
tttgaaaatatcacattgggcatgaattttacccaggatgaagtagacagcaatttgatt
cagtatgtccattttgggcaagagggcattcgggatctaattaaatttgacgtgactgat
ggaatcaatgccctcatagatcgctacttttatgtgtctattggaagccctgacattgtc
ttccctgatgtgataagtaaaggagtgtccttgaaagaaggtggtaaggtcaccctcaca
acagatctactgagcactagtgacttgaacagtcctgatgaaaacttagtttttaccatc
accagggctcccatgagaggccacttagaaagcacagaccagcctcgagtgtctatcaca
tctttcactcagctccaactggctggcaataaaatctactatatccacacagctgatgay
gaggtaaagatggacagttttgagtttcaggtcactgatggacgtaaccctgtcttccgg
acattccgtatctccatcagcgatgtggacaacaaaaagccagtggtcaccatccataac
ctggttgtcagcgaaggtgaaaagaagctgattactccctttgaactcactgtggaagac
agggatactccagacaaactcttgaaattcactgtcacccaagtgcctgttcatggtcaa
ctcctattcaacaataccagacccgccatgatttttaccaagcaggacttgaatgaaaac
ttaatcagctacagacatgacggtaccgagtcaagtgaagacagcttctccttcacagtg
actgatggttcccatacagatttctatgtttttcctgatacagtatttgaaacaagaaga
ccccaagtaatgaagatccggatcttagctgttgacaacagagtcccccaaattgtcgtg
aacaaaggggcctctacacttcgcactctggccacaggccacttggggttcatgatcaca
agtaaagtattgaaagcagaggacagagacagcttacacgtttctctccggtttattgtg
accgaggcccctcgacatggatatctcctcaacctgggccagggcaaccacagtgcgact
gagtttacacaagctgacattgatgatatgaaaatatgctatgtcttaagagaaggggct
aatgctgtaagtgacatattccagtttacagttgaagatgggggtggaaacaaattaacc
aagcagcattttcgtctgaattgggcatggatctcctttgaaaaggaatattacttgatc
aatgaggactccaaatttctagatgtcatgcttaagcgtagaggttatttgggagagact
tcctttataagtattggcacaagagacgggactgcaaaaaaagacaaggacttcaagggc
aaagcacagaggcaagtgcagttcaacccaggccagacccgggccacgtggcgagtgcgg
attctgagcgacggggcgcacgagcagtccgagaccttccaggtggttctcgcagagccy
gtgctggctgccctggagttccccgcggtgaccacagtggagatcgtggacccaggagat
gaatcaactgtgttcatcccccagtctgaatactccattgaagaggatgttggcgaactg
ttcattcccatcaggagaagtggagacgtgagccaggagttgatggtggtctgttatacg
cggcaaggaacggcaagaggaaccgtgccaacgtctgtgctctcctattctgattacata
tcccggcccgaggaccacaccagtgttatccgctttgacaaagatgagcgggagaagatg
tgcagggtcgttataattgatgactccttgtttgaagaggaggaaacattccacgttctc
ctgagtatgccgatgggtgggcgaattggatcagagttcccaggggctcaggttacaatc
aaacccgacaaagacgacgaacctgtcttctactttggtgacgtcgagtactccgtggat
gagagtgcgggctcggtggaggtgcgggtgtggaggagyggcactgacctgtcccaggct
tctagtgtcaccgtgacatcgcagaaaacagaccctccctcagccgatgctggaacagac
tacgtgggaatcagccgtaatttagattttgcacctgtgaaccccgactcgattnnnnnn
nnnnnnnnnnnggacacatcttgtccaaacaaactggtgctccgaatgcctatgaatgca
gcccttggggaccccagcaaagccacggtgaccataaatgattctgtctcagattgtgag
tgtttattaactgatgacgataagtaa
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