Bos indicus (zebu cattle): 109567065
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Entry
109567065 CDS
T04792
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109567065 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109567065 (DIS3)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109567065 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
109567065
NCBI-ProteinID:
XP_019827376
UniProt:
A0A6P5CMR1
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Position
12:complement(47853407..47878314)
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AA seq
955 aa
AA seq
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MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGASGCAVCDGAHEGPVLELQSLDRASSLC
PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRSRSAPVYKRIRDMTNNQEKHF
YTFTNEHHRETYVEQLQGENSNDRNDRAIRVAAKWYNEHLKNMSAENRLQVIFITNDRKN
KEKAIEEGIPAFTCEEYIKSLTANPELIDRLACLSEEGNEIESGKTIFSEHLPLSKLQQG
IKSGTYLQGTFRASRENYLEATVWVHSDDEDNKEILLQGLKNLNRAIHEDIVAVELLPKH
QWVAPSSVVLQDEGQNEDDIEKEEERERILKTAVNEKMLKPTGRVVGIIKRNWRPYCGML
SKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNL
GEVGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDP
PGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKVNVLN
LKWNFDTSFLSSLVVGNKAXCETDKESCVNDLNFPRFVFLNKASLTYAEAQMRIDSAAMN
DNITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMV
EEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKALAD
SLDXADSPIFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRYA
DIIVHRLLAVAIGADCTYPELTDKHKLADLCKNLNFRHKMAQYAQRASVAFHTQLFFKSK
GIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPRLIYDDEIPSLKIEDTVFHV
FDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGISVSADTSNMDINEPERKKKKLQK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtccaagactttcttgaaaaagacgcgggcgggtggcgtgatgaagattgtg
cgcgagcactacctgcgggatgacataggctgcggtgcgtcggggtgcgcggtgtgcgac
ggagcgcacgagggacctgtcctcgagctgcaatcccttgaccgggccagcagcctctgy
ccgcagccacactacttgctgccggacaccaacgtgctgctccaccagattgatgtcctt
gaggaccctgccatcaggaatgtcatcgtgctacagacagttctccaagaagtgagaagt
aggagtgctccggtatacaaacgaatccgagatatgactaataaccaggagaagcatttc
tacacatttactaatgagcaccatagagaaacwtacgtagaacaattacagggagaaaat
tctaatgacaggaatgatagagccatccgagtagctgcaaaatggtacaatgaacatttg
aagaatatgtcagcagagaatcggctgcaagttatcttcataaccaatgacaggaaaaac
aaagagaaagccatagaagaagggataccagcgttcacttgtgaagaatatataaaaagc
ctaactgctaaccctgaactcatagatcgtcttgcttgcttgtctgaagaagggaatgaa
atagaaagtggaaaaacaatattttcagagcatcttccgttaagtaagctacaacagggc
atcaaatctggcacataccttcaagggacatttcgagccagcagggaaaattacttagaa
gctacagtatgggtccatagcgatgacgaagacaataaagagatactcttacaaggactt
aaaaatttaaaccgagctattcatgaagatattgtggctgtggagcttcttcccaagcat
cagtgggtagcaccatcttctgtggttttacaagatgaaggtcaaaatgaagatgatata
gagaaagaagaggagagagaacgcattcttaagactgctgtaaatgaaaaaatgttaaag
cctacaggtagagttgttgggataataaaaaggaactggagaccatattgtggcatgctt
tccaagtctgatattaaggagtcaagaagacatctctttactcctgctgataagagaatc
cctagaattcggatagaaaccagacaggcctctacgttagaaggacggagaattattgtt
gctgttgatggttggccgagaaattccagatatccaaatggacactttgttaaaaattta
ggtgaagtcggagacaaagagactgaaacagaagttttgttacttgagcatgatgttccc
catcaggctttttcacaggctgttcttagctttctaccaaagatgccctggagcatcact
gagaaggacatgaaaaaccgagaagacctgagacatctgtgtgtctgtagtgtggacccc
ccaggatgtactgatatagaygatgctctccattgtagagaacttgaaaatggaaatttg
gaggttggtgttcatattgctgatgttagccattttattaggccaggaaatgctttggat
caagagtcagctagaaggggaacaactgtatatctttgtgaaaaggtaaatgtgttaaat
ttaaagtggaattttgatacatcttttctgtcatctctagtggttggaaataaagcttma
tgtgaaactgayaaggagtcatgtgtgaatgatttaaattttcctagrtttgtattttta
aataaggcttcccttacatatgctgaagctcagatgagaattgattcagcagctatgaac
gataatattactactagtctccgtggactaaataaactagctaaaattttgaaaaaagga
agaattgaaaaaggggctttgactctttcttctccagaagttcgattccacatggacagt
gaaactcatgatcctatagatctgcagaccaaggaactcagagaracaaattccatggtg
gaagaatttatgttacttgccaatatctctgttgcaaaaaaaattcatgaagaattttct
gaacacgctctgcttcgwaaacatcctgctcctcctccatcaaattatgaaattcttgtt
aaggcagctaaatctaagaatttggaaattaaaactgatacagccaaggctttagctgac
tctttggaccrggcggattcacctattttcccttatctaaacaccctgttaagaatatta
gcaactcgctgtatgatgcaagctgtgtacttctgctctggaatggataatgattttcat
cactatggcttagcatccccaatatacacacattttacttcacccatccgaagatacgca
gacatcattgttcatcgcttgttggctgtggctattggagctgactgtacttatccagag
ttgaccgacaaacacaagcttgcagatttatgtaaaaatctcaatttccggcacaaaatg
gctcagtacgctcagcgtgcatctgtggcttttcatactcagttatttttcaaaagcaaa
ggaatagtaagtgaagaagcttatattctatttgtaaggaagaatgctattgtggtatta
atcccaaagtatggtttagaaggtacagtgttctttgaagaaaaggacaaaccaaatcca
cggcttatatatgatgatgagataccatcacttaaaatagaagatacagtatttcatgta
tttgataaagttaaagtgaaaatcatgttagactcatccaatcttcagcatcagaaaatc
cgaatgtccctggtagaaccacagataccaggaataagtgtttctgctgatacttcaaac
atggacattaatgaaccagagagaaagaagaagaagcttcaaaaatag
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