Bos indicus (zebu cattle): 109567101
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Entry
109567101 CDS
T04792
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04151
PI3K-Akt signaling pathway
biu04382
Cornified envelope formation
biu04510
Focal adhesion
biu04512
ECM-receptor interaction
biu04518
Integrin signaling
biu04820
Cytoskeleton in muscle cells
biu04926
Relaxin signaling pathway
biu04933
AGE-RAGE signaling pathway in diabetic complications
biu04974
Protein digestion and absorption
biu05146
Amoebiasis
biu05165
Human papillomavirus infection
biu05200
Pathways in cancer
biu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109567101 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109567101 (COL4A2)
04518 Integrin signaling
109567101 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109567101 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109567101 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
109567101 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
109567101 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
109567101 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109567101 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
109567101 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
109567101 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
109567101 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
109567101 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
biu04147
]
109567101 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109567101 (COL4A2)
Exosome [BR:
biu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109567101 (COL4A2)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109567101 (COL4A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109567101
NCBI-ProteinID:
XP_019827406
LinkDB
All DBs
Position
12
Genome browser
AA seq
1683 aa
AA seq
DB search
AQSVLAGVKKLDVPCGGRDCSGGCQCYPEKGXRGQPGPVGPQGYTGPPGLQGFPGLQGRK
GDKGQRGAPGITGPKGDVGPRGVSGFPGADGIPGHPGQGGPRGPPGYDGCNGTVGDSGYA
GPPGPGGFLGPRGPQGPKGQKGEPYALSSEDRDKYRGEPGEPGLVGLQGPPGRPGPVGQM
GPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGEKGDMGLQGPGGIPPDNGYVEKPTPVY
ELLPEQYKGEKGSQGEPGRIGVSLKGEEGVVGFSGPRGAPGIDSEKGLPGQKGSRGLDGY
QGPDGLPGPKGERGDPGPPGPPAYSPYPSVAKGVRGEPGSPGAPGEPGDRGVPGDPGLPG
RPGTTIGDEDEKRGLPGEMGPKGFTGEQGFPALYPGPPGTDGQPGLRGPPGLPGPPGPDG
FLFGLKGEKGSGGFPGSSGFPGARGQKGWKGDAGDCKCADQFIRGPPGLPGPKGFAGANG
QPGSKGSQGDPGQHGVPGFAGFKGAPGNVGPPGPKGMKGDSRTITTKGERGQPGVPGXPG
LKGSDGIPGPPGLDGFHGLPGPPGDGIKGPRGDTGXPGAPGTKGLPGERGPPGLGLPGPK
GERGFPGDAGLPGPPGFPGPPGLPGSPGQIDCDSGVKRPIGADGQETIQPGCVGGPKGSP
GQPGLPGPPGAKGLRGIPGFSGADGAPGLKGLPGDPGREGFPGPPGFMGPRGSKGAVGPP
GLDGLPGASGLPGPVGPPGDRGLPGEVLGAQPGPRGDSGLPGRPGPKGPPGERGPPGFRG
SQGMPGMPGQKGQPGSPGLSGQPGLPGPPGQHGFPGAPGREGPLGPPGAPGFQGLPGDRG
EPGDTGVPGPVGMKGGSGDRGDPGQQGERGHPGHPGFKGVSGMPGAPGLKGARGSPGMDG
FEGMLGLKGRPGLPGIKGEAGFFGIPGLKGLAGEPGVKGSRGDPGPPGPPPLIEPGMKDI
KGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSGIPGLPGRPGQIKGVKGDTGIPGVPGSPG
FPGVPGSPGIMGFXGFTGSRGDKGVPGRAGLFGEVGPTGDFGDIGDTIDLPGSPGLKGER
GTTGIPGQKGFFGERGTEGDIGFPGITGLAGVQGPPGFKGQKGFPGLTGLQGPQGDPGRA
GAPGIKGDSGWPGNPGLPGLPGLRGISGLHGLPGSKGFPGSPGADVHGDPGFPGPAGDKG
DPGEPNTLPGPTGAPGQKGERGAPGERGPIGSPGLQGFPGITPLSNISGSPGDXGAPGIF
GLEGYRGPPGPPGPAALPGSKGDEGSPGTPGSPGTKGWIGDPGPQGRPGVFGLPGEKGPK
GEPGFMGNIGPTGSPGDRGPKGPKGDRGLPGAPGAVGTPGITGIPQRIAIERGPVGPQGR
RGPPGAQGEMGPQGPPGEPGFRGAQGKAGPQGRGGVSAIPGFRGDQGPVGLQGPVGFEGE
PGRPGSPGLPGMPGRSISIGYLLVKHSQTDKEPMCPVGMNKLWSGYSLLYFEGQEKAHNQ
DLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVAEEDIRPYISR
CSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSXLED
FRATPFIECNGARGTCHYYANKYSFWLTTIPEQSFQGTPSADTLKAGLIRTHISRCQVCM
KNL
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
gcccagagcgtcctggcgggtgtgaagaaattggaygtgccctgtggaggcagagactgc
agcgggggctgccagtgctaccctgagaaaggagsgcggggccagccagggccggtgggc
ccccaggggtacaccgggccccccgggctacagggcttcccaggactgcaaggccgcaag
ggtgacaagggccaaagaggagcccccgggatcacaggcccgaagggagacgtgggacca
agaggtgtttcgggattccctggtgccgacggaattcccggccatcccgggcaaggcgga
cccagaggacctcctgggtatgacggctgcaacgggaccgtgggcgactcgggctacgca
ggacccccgggccctggcggcttcctcgggccccgcgggccccaaggaccgaaagggcag
aaaggcgagccctacgctctgtcctcagaggaccgcgacaaatacaggggggaacctgga
gagccgggactggtcggcttgcaggggcctcccggccgccctgggcccgtgggacagatg
ggtccggttggagccccaggaagaccgggaccacctggaccccctggacccaaaggacag
ccaggcaacagaggacttggtttttatggagaaaaaggtgaaaagggcgacatgggactg
caggggcccggcgggattccaccggacaacggttacgtcgagaagcccacgccggtgtac
gagcttctcccagagcagtataagggtgaaaaaggcagccagggagaaccagggagaata
ggcgtctccttgaagggagaagaaggcgtcgtgggcttctcgggaccrcggggtgccccc
ggcatcgacagtgagaaaggcttgccgggacagaaaggaagcagaggactggacgggtac
caaggccctgacggattgccaggacccaagggagaaaggggcgacccaggcccccccggy
cccccggcctactccccgtatccttccgtggccaaaggtgtcagaggtgagccgggatcc
ccaggagcycccggggagccaggagaccgcggggtaccaggagaccccggcctgccaggc
cggcccggcacaaccatcggagacgaagatgagaagagaggcttgccrggtgaaatggga
cccaaaggcttcacaggagaacagggtttccccgcgctgtacccyggccccccagggact
gatgggcagccagggctccgcggtccccccgggctcccaggaccgcccggcccagacggt
tttctgttcggcctgaaaggagaaaaaggaagtgggggcttccctggctcctccgggttc
ccaggggctcgtggacagaaaggatggaaaggtgacgccggcgactgtaaatgtgcagat
cagttcatcaggggtccgccagggctgccaggacccaagggctttgcaggtgccaacggg
cagcctggcagtaaaggcagccaaggagaccccggccagcacggcgtccccgggttcgcc
gggttcaagggagcccctggtaacgtcggtccccccgggcccaaaggaatgaagggagac
tccaggaccatcaccaccaaaggtgagcggggccagccaggcgtcccaggcrcgccaggg
ctgaaaggtagcgacggcatcccaggaccacccgggctcgatgggttccacggactccca
ggccctcccggcgatggcatcaaaggccccagaggggacacaggccamccaggagccccc
ggcacgaagggccttccaggggagaggggccccccaggactgggcctgccaggccccaaa
ggcgagcgcggcttccccggcgatgctggattgcccggaccaccaggcttcccagggcct
cccggcctccccggctctccaggacagatcgattgtgactcgggtgtgaaaagacccatc
ggagcagacggacaggagaccatccagccaggttgtgttggaggacccaaaggatcccca
ggccagccgggtctccccggccccccaggtgccaaaggcctcagaggaatcccaggattt
tcaggagccgacggagctccagggctcaagggtctcccgggagatccaggtcgagaggga
ttcccaggacccccaggcttcatgggaccccgcggctccaaaggtgcagtgggcccccct
ggcctggatggactccctggcgcctccggcctaccrgggccagtcgggcccccaggggac
aggggccttcctggagaagtgctgggggcccagcccgggccccggggagactctggactg
cctggacgccccggaccraagggccctcccggagaaagaggcccgcctggcttcagggga
agccagggcatgccagggatgccaggccagaagggccagccgggctccccsggactctca
ggccagccaggactgccagggccaccaggacagcacggcttcccaggagcgcctggtcgg
gaggggcccttggggcccccgggcgcccccggctttcaaggtctgcctggagacagagga
gagccgggggacaccggcgtccctggccccgtgggcatgaaaggcggctctggggacaga
ggtgaccctggacagcaaggagagagaggtcaccctggacaccccggatttaaaggagtg
tctggaatgcccggtgccccgggactgaaaggggccaggggctcccccgggatggacggc
tttgaaggcatgctcggcctcaagggcagacctgggctcccaggaatcaaaggagaggca
gggtttttcggaattccagggctgaagggcctggctggtgagccgggtgtgaaaggcagc
cgaggagaccccgggcccccaggaccgccccccctcatcgagccagggatgaaagacatc
aaaggagagaagggagacgaaggccccatgggactgaaagggtacctgggcctgaaaggc
cttcctggaatgccaggtatccctgggctgtcgggaatcccagggctgcccgggagaccc
ggccagatcaaaggagtcaaaggagacactggaatccccggtgtgcccggctccccgggg
ttccccggcgtgcccggctcccccggaatcatggggttcyaaggcttcacgggcagtagg
ggtgacaagggcgttcccgggagagcaggcctcttcggcgaggtcggccccactggtgac
ttcggtgacatcggagacacgatagatctccccgggagcccgggcctgaagggggagcgg
ggcaccaccggaataccaggtcaaaagggattcttyggcgagagaggcactgagggtgat
atcggctttccrgggatcaccggcctggctggagtccagggcccccctggattcaaaggg
caaaaaggctttccaggactcacagggctccaggggcctcagggagacccgggacgggcc
ggagcgcctggcatcaaaggagactctggctggccggggaacccaggcttaccaggtctg
cccggactccgaggcatcagcggattgcacggtctgccaggcagcaaaggcttcccggga
tccccaggtgcagaygtccacggggaccccggattcccaggccctgccggggataagggt
gaccccggagagcccaacacccttccaggccccacgggagccccgggacagaagggcgag
cgtggagccccaggggagcgaggcccaatcgggagtccyggacttcagggctttccaggc
atcacccctctctccaacatctctgggtcaccaggggacrttggcgcgcccgggatattc
ggcctggaaggttatcgagggcccccggggccgcccgggcctgcagctctccccggaagc
aaaggcgatgaggggagtccaggaacccccggaagccccgggaccaaaggatggatcggc
gaccccgggccccagggccggcctggcgtgttygggctcccaggagaaaaagggcccaaa
ggggagccaggattcatgggcaacataggccccaccgggagcccgggcgaccgaggcccc
aagggacccaaaggagaccgaggactcccgggtgctcccggtgctgtggggactccaggc
atcacaggaatcccccagaggattgcgatcgagcggggcccagtgggtccacagggcagg
agaggccccccaggggctcagggggagatggggccacagggcccccccggagaaccaggt
ttccgtggggcgcagggcaaggccgggccccagggacgaggcggcgtgtcggccattccg
ggattccgtggagaccaggggcccgtggggctgcagggaccggtgggcttcgaaggggag
ccgggccgccccggaagccccggcctgcccggcatgcccggccgaagcatcagcatcggg
tacctcctggtgaagcacagccagaccgacaaggagcccatgtgccccgtgggcatgaac
aagctctggagcgggtacagtctgctctacttcgagggccaggagaaggcccacaaccag
gacctggggctggcgggctcctgcctggcacggttcagcaccatgcccttcctgtactgc
aaccccggggacgtctgctactatgccagccgtaacgacaagtcytactggctgtccacc
accgccccgctgcccatgatgcccgtggcygaggaggacatccggccctacatcagccgc
tgctctgtgtgcgaggccccggccgtcgccatcgcagtccacagccaggatgtctccatc
ccccactgcccggccgggtggcgcagcttgtggatcggatactccttcctcatgcacacg
gccgctggtgacgaaggaggtggccagtcgctggtgtcgccgggcagcygcctggaggac
ttccgcgccacgccgttcattgagtgcaacggggcccgcggcacgtgccactactacgcg
aacaartacagcttctggctgaccaccatcccggagcagagcttccagggcacgccctct
gccgacacactcaaggccggcctcatccgcacgcacatcagccgctgccaggtgtgcatg
aagaacctgtga
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