KEGG   Bos indicus (zebu cattle): 109567118
Entry
109567118         CDS       T04792                                 
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
  KO
K16499  protocadherin delta 2
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:biu04515]
    109567118 (PCDH8)
Cell adhesion molecules [BR:biu04515]
 Cadherins
  Protocadherins
   109567118 (PCDH8)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 109567118
NCBI-ProteinID: XP_019827428
UniProt: A0A6P5CPK0
LinkDB
Position
12:9554742..9559388
AA seq 1072 aa
MSPARRGGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLIRVREGDGQLTVXDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVSVRDINDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQATYSLGLVAQDXXXXPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRLRDVNDNAPDISITPLA
APGAPAASPFPAAAAALGGAEATSSTGPGTPEAGAVSLVPEGAARESLVALVSTSDRDSG
ANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERISEYNLTLVAEDRGAPPLRTVRP
YTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDPDLGRNGQVTYRLLEAEVG
RAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQ
NDHAPIQVXPAPANGSLEVAVPGRTAKDTAVARVQARDADEGANGELAFDLLQQEPREAF
AIGRRTGEIVLTGDLSQEPPGRVFRALLVISDGGRPPLSTTATVSFVVTAGGGRGLASPA
GAGNPERSRPPGSRLATSGPALQWDTPLIIIIVLAGSCTLLLAAIIAIATTCNRRKKEVR
KGGPRREERPGAAGGXXXXXXXXXXXXRGAGPRPNMFDVLTFPGSGKAPFGSPAADAPPP
AVAAAAEVTGSESGGATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHSF
NTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSXEGLWACTAECKILG
HSDRCWSPSCAGGPSTHASTHPPAQMSTFCKSTSLPRXXLRRDSYYQAQLPKTVGLQSVY
EKVLHRDYDRTATLLSPPRPGRLPDLQEIGVPLYPSPXGRYLSPKKEANENV
NT seq 3219 nt   +upstreamnt  +downstreamnt
atgagtccagccaggcgcgggggcagcccctgccttttccccttgcagctcttcagcctc
tgctgggtgctctcggtggcccagagcaagactgtgagatacagcaccttcgaggaggat
gcccccggcacggtcatcgggaccctggccgaagacctgcatatgaaagtgtccggagac
acaagcttccgcctgatgaagcagttcaacagctcgctgatccgagtgcgtgagggcgac
gggcagctgaccgtcnnggacgcgggcctggaccgagagcggctgtgcggccaggcccct
cagtgcgtgctggccttcgacgtggtcagcttctcccaggagcagttccggctggtgcac
gtggaggtgtcggtgagggacatcaacgaccatgckccgcgcttcccccgggcccagatt
cccgtggaggtgtccgagggcgcggctgtgggcacgcgcatccccctggaggtgcccgtg
gacgaggacgtgggcgccaatgggctgcaaagcgtgcgcctggcagagccccacagcccc
ttccgcgtggagctgcagacgcgcgcggacggtgcccagtgcgccgacttggtgctgctg
caggagctggaccgcgagagccaggccacctacagcctggggctggtggcccaggacnnn
nnnnnnncgccgcgctccgccactgcagccctcagcgtgcgcgtgctggacgccaacgac
cacagcccggccttcccgcagggtgccgtggcggaagtggagctggctgaggacgcgccc
gtgggctcgctcctgctagacctggacgcggcggaccccgacgagggccccaacggcgac
gtggtgttcgccttcggggcccgcaccccgcccgaggcgcgccgcctcttccgcctggac
ccgcgctccggccgcctcaccctggcggggcccgtggactacgagcgccaggacacttac
gaactggacgtgcgggcgcaggaccgcggccccgggccccgcgccgccacctgcaaggtc
atcgtgcgcctccgcgacgtcaatgacaacgctccggacatctccatcaccccgctggcc
gccccgggcgcgcctgctgcctcgcccttccccgccgccgccgccgctcttgggggagcg
gaggccacctcgtcgaccgggcctgggacgccggaggcgggcgccgtctcgctggtgccg
gagggggcggctcgcgagagcctggtggcgctggtcagcacctcggacagggactcgggc
gccaatgggcaggtgcgttgcgccctctacgggcacgagcacttccggctgcagcctgcc
tacgcgggcagctacctggtggtgaccgcggcgtccctggaccgcgagcgcatctccgag
tacaacctgacgctggtggccgaggaccgcggcgctcccccgctgcgcacagtgcggccc
tacacggtgcgcgtgggcgacgagaacgacaacgcgccgctcttcacacggccagtctat
gaggtgtcagtgcgcgagaacaacccgccgggggcttacttggccacggtggccgccagg
gacccggacctgggccgcaacggccaggtcacctaccggctgctggaggccgaggtgggc
cgggctgggggcgccgtgtccacctacgtctccgtggacccagcgacaggggccatctac
gcgctgcgcagcttcgactacgagacgcttcgccagctcgacgtgcgcatccaggcgagc
gacgggggctcccctcagctctccagcagtgccctggtgcaagtgcgggtgctkgaccag
aacgaccacgccccgatccaagtgcncccggcgcccgccaacggttccctggaagtggcg
gtccccgggcgcacagcgaaggacacggcggtggcgcgcgtgcaggcccgggacgcagac
gagggtgccaacggggagctggccttcgacctgctgcagcaggagccgcgagaagccttc
gccatcggccgccgcaccggggagatcgtgctcaccggcgacctctcgcaggagccgccc
ggccgagtcttccgggcgctgctagtcatatccgacggcggccgccccccgctctccacc
accgccaccgtcagcttcgtggtgacggcgggcggcggacgcgggctggcgtcgccggca
ggcgcggggaacccggagcgctctcgcccgcccggctcgcggctcgcgacgtcggggccg
gcgctgcagtgggacacgccgctgatcatcatcatcgtgctggccgggagctgcacgctg
ctgctggccgccatcatcgccatcgccaccacctgcaaccgccgcaagaaggaggtgcgc
aaaggggggccccgccgggaagagcggcccggggcggcaggcggcgnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnncggggagccgggcccaggcccaacatgttcgacgtgctc
accttccctggcagcggcaaagcgccctttggcagccccgcggccgacgcgcccccgccc
gcggtcgccgccgcggccgaagtaacgggctcggaaagcggcggtgccaccggggaaagc
gcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctacggcgcc
tcccccggcttcggcaaggagccggcgccccctgtggctgtctggaagggacattccttc
aacaccatctccggccgggaagcggagaagttcagcggcaaagacagcggcaaaggggac
agtgatttcaacgacagcgattccgacatcagcggggacgctctgaagaaggacctcatc
aaccacatgcagagcgstgagggcttgtgggcctgcaccgcggagtgtaagatcctgggc
cactctgaccgctgctggagcccctcctgcgctggagggcccagcacacacgcctcgact
caccccccagcccagatgtcaaccttctgtaagagcacgtccctgccccgggannnnctg
cgcagagacagttactaccaggcccagctgcccaagaccgtggggctgcagagcgtctac
gagaaggtgctgcacagagactatgacaggacagccactctgctatccccgcctcggcca
gggaggctcccagacttgcaggagatcggggtgcccttgtatccgtccccccmtggcagg
tacctgtccccaaagaaggaagccaatgaaaatgtgtaa

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