Bos indicus (zebu cattle): 109567118
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Entry
109567118 CDS
T04792
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
biu04515
]
109567118 (PCDH8)
Cell adhesion molecules [BR:
biu04515
]
Cadherins
Protocadherins
109567118 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
109567118
NCBI-ProteinID:
XP_019827428
UniProt:
A0A6P5CPK0
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All DBs
Position
12:9554742..9559388
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AA seq
1072 aa
AA seq
DB search
MSPARRGGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLIRVREGDGQLTVXDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVSVRDINDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQATYSLGLVAQDXXXXPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRLRDVNDNAPDISITPLA
APGAPAASPFPAAAAALGGAEATSSTGPGTPEAGAVSLVPEGAARESLVALVSTSDRDSG
ANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERISEYNLTLVAEDRGAPPLRTVRP
YTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDPDLGRNGQVTYRLLEAEVG
RAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQ
NDHAPIQVXPAPANGSLEVAVPGRTAKDTAVARVQARDADEGANGELAFDLLQQEPREAF
AIGRRTGEIVLTGDLSQEPPGRVFRALLVISDGGRPPLSTTATVSFVVTAGGGRGLASPA
GAGNPERSRPPGSRLATSGPALQWDTPLIIIIVLAGSCTLLLAAIIAIATTCNRRKKEVR
KGGPRREERPGAAGGXXXXXXXXXXXXRGAGPRPNMFDVLTFPGSGKAPFGSPAADAPPP
AVAAAAEVTGSESGGATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHSF
NTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSXEGLWACTAECKILG
HSDRCWSPSCAGGPSTHASTHPPAQMSTFCKSTSLPRXXLRRDSYYQAQLPKTVGLQSVY
EKVLHRDYDRTATLLSPPRPGRLPDLQEIGVPLYPSPXGRYLSPKKEANENV
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagccaggcgcgggggcagcccctgccttttccccttgcagctcttcagcctc
tgctgggtgctctcggtggcccagagcaagactgtgagatacagcaccttcgaggaggat
gcccccggcacggtcatcgggaccctggccgaagacctgcatatgaaagtgtccggagac
acaagcttccgcctgatgaagcagttcaacagctcgctgatccgagtgcgtgagggcgac
gggcagctgaccgtcnnggacgcgggcctggaccgagagcggctgtgcggccaggcccct
cagtgcgtgctggccttcgacgtggtcagcttctcccaggagcagttccggctggtgcac
gtggaggtgtcggtgagggacatcaacgaccatgckccgcgcttcccccgggcccagatt
cccgtggaggtgtccgagggcgcggctgtgggcacgcgcatccccctggaggtgcccgtg
gacgaggacgtgggcgccaatgggctgcaaagcgtgcgcctggcagagccccacagcccc
ttccgcgtggagctgcagacgcgcgcggacggtgcccagtgcgccgacttggtgctgctg
caggagctggaccgcgagagccaggccacctacagcctggggctggtggcccaggacnnn
nnnnnnncgccgcgctccgccactgcagccctcagcgtgcgcgtgctggacgccaacgac
cacagcccggccttcccgcagggtgccgtggcggaagtggagctggctgaggacgcgccc
gtgggctcgctcctgctagacctggacgcggcggaccccgacgagggccccaacggcgac
gtggtgttcgccttcggggcccgcaccccgcccgaggcgcgccgcctcttccgcctggac
ccgcgctccggccgcctcaccctggcggggcccgtggactacgagcgccaggacacttac
gaactggacgtgcgggcgcaggaccgcggccccgggccccgcgccgccacctgcaaggtc
atcgtgcgcctccgcgacgtcaatgacaacgctccggacatctccatcaccccgctggcc
gccccgggcgcgcctgctgcctcgcccttccccgccgccgccgccgctcttgggggagcg
gaggccacctcgtcgaccgggcctgggacgccggaggcgggcgccgtctcgctggtgccg
gagggggcggctcgcgagagcctggtggcgctggtcagcacctcggacagggactcgggc
gccaatgggcaggtgcgttgcgccctctacgggcacgagcacttccggctgcagcctgcc
tacgcgggcagctacctggtggtgaccgcggcgtccctggaccgcgagcgcatctccgag
tacaacctgacgctggtggccgaggaccgcggcgctcccccgctgcgcacagtgcggccc
tacacggtgcgcgtgggcgacgagaacgacaacgcgccgctcttcacacggccagtctat
gaggtgtcagtgcgcgagaacaacccgccgggggcttacttggccacggtggccgccagg
gacccggacctgggccgcaacggccaggtcacctaccggctgctggaggccgaggtgggc
cgggctgggggcgccgtgtccacctacgtctccgtggacccagcgacaggggccatctac
gcgctgcgcagcttcgactacgagacgcttcgccagctcgacgtgcgcatccaggcgagc
gacgggggctcccctcagctctccagcagtgccctggtgcaagtgcgggtgctkgaccag
aacgaccacgccccgatccaagtgcncccggcgcccgccaacggttccctggaagtggcg
gtccccgggcgcacagcgaaggacacggcggtggcgcgcgtgcaggcccgggacgcagac
gagggtgccaacggggagctggccttcgacctgctgcagcaggagccgcgagaagccttc
gccatcggccgccgcaccggggagatcgtgctcaccggcgacctctcgcaggagccgccc
ggccgagtcttccgggcgctgctagtcatatccgacggcggccgccccccgctctccacc
accgccaccgtcagcttcgtggtgacggcgggcggcggacgcgggctggcgtcgccggca
ggcgcggggaacccggagcgctctcgcccgcccggctcgcggctcgcgacgtcggggccg
gcgctgcagtgggacacgccgctgatcatcatcatcgtgctggccgggagctgcacgctg
ctgctggccgccatcatcgccatcgccaccacctgcaaccgccgcaagaaggaggtgcgc
aaaggggggccccgccgggaagagcggcccggggcggcaggcggcgnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnncggggagccgggcccaggcccaacatgttcgacgtgctc
accttccctggcagcggcaaagcgccctttggcagccccgcggccgacgcgcccccgccc
gcggtcgccgccgcggccgaagtaacgggctcggaaagcggcggtgccaccggggaaagc
gcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctacggcgcc
tcccccggcttcggcaaggagccggcgccccctgtggctgtctggaagggacattccttc
aacaccatctccggccgggaagcggagaagttcagcggcaaagacagcggcaaaggggac
agtgatttcaacgacagcgattccgacatcagcggggacgctctgaagaaggacctcatc
aaccacatgcagagcgstgagggcttgtgggcctgcaccgcggagtgtaagatcctgggc
cactctgaccgctgctggagcccctcctgcgctggagggcccagcacacacgcctcgact
caccccccagcccagatgtcaaccttctgtaagagcacgtccctgccccgggannnnctg
cgcagagacagttactaccaggcccagctgcccaagaccgtggggctgcagagcgtctac
gagaaggtgctgcacagagactatgacaggacagccactctgctatccccgcctcggcca
gggaggctcccagacttgcaggagatcggggtgcccttgtatccgtccccccmtggcagg
tacctgtccccaaagaaggaagccaatgaaaatgtgtaa
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