Bos indicus (zebu cattle): 109567209
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Entry
109567209 CDS
T04792
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04140
Autophagy - animal
biu04148
Efferocytosis
biu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109567209 (VPS16)
04148 Efferocytosis
109567209 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109567209 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109567209 (VPS16)
Membrane trafficking [BR:
biu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109567209 (VPS16)
Hops complex
109567209 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
109567209
NCBI-ProteinID:
XP_019827527
UniProt:
A0A6P5CRM9
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Position
13:complement(52878261..52906361)
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AA seq
839 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKPA
SARPVLEIYSASGVPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTVCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRVFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGXLPQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILSGQNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAEMSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacaccgcgaactggaacccactcggggactctgctttttaccggaaatat
gagctgtatagcatggactgggacctgaaggaggaactgagggactgcctagtggctgct
gcaccctatggggggcccattgcactgctgaggaacccctggcggaaggagaagcccgcc
agtgccaggccggttctcgagatctactcagcttccggggtgcctctggccagtctcttg
tggaagagtgggcccgtggtgtccctgggctggtcagctgaggaggagctgctctgcgtg
caggaagacggagttgtgctggtttacgggctgcatggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctggatgcccggatcttccatactgagttt
ggttctggggtggccatcctcacaggagctcaccgcttcaccctcagtgccaacgtgggt
gacctcaaactccgccggatgccagaggtgccaggtctgcagagtgcaccctcatgctgg
accacagtgtgccaggaccgagtggcgcacattctcctggctgtaggacctgatctttac
ctcctagaccatgcagcctgctctgcggtgacaccccctggcctggccccaggagtgagc
agcttcctgcagatggctgtctccttcacctacagacacctggcgctcttcacagacaca
ggctacatctggatggggacagcatctctcaaggagaagctgtgtgagttcaactgcaac
atccgggcccccccgaagcagatggtctggtgtagccgtccgcgcagcaaggagagggct
gttgtggtggcctgggagaggcggctaatggtggtgggcgatgcccctgagagcatccag
ttcgtgctagatgaggactcctacctggtgcctgagttggacggggtccgagtcttctcc
cgcagtacccacgagttcctgcatgaggttccagtggccagtgaggagatctttaaaata
gcctcgatggcccctggagcgctgttgttggaggctcagaaggagtatgagaaagagagc
cagaaggcggatgagtacctgcgggagatccaggagctggggnnnctgccccaggctgtg
cagcagtgcatcgaggctgcaggacacgagcactggccagatatgcagaagagtctgctc
agggcggcctccttcggaaagtgtttcctggacagatttccacctgacagctttgtgcgc
atgtgtcaggaccttcgtgtactcaatgctattcgggactatcacatcggaatccccctc
acctatagccaatacaagcagctcactatccaggtgttgctagacaggcttgtgttgcga
aggctttaccccctggccattcagatatgtgagtacctgcggcttcctgaagtgcagggc
gtcagcagaatcctggcccactgggcctgctacaaggtacaacagaaggatgtgtctgac
gaggatgttgctcgggccattaatcagaagctgggggacacgcctggtgtctcctactct
gacattgctgcacgagcctatggctgtggccgcacggagctggccatcaagctgctggaa
tatgagccacgctctggggagcaagttccccttctcctgaagatgaagaggagcaaactg
gcactaagcaaggccatcgagagtggggatactgatctggtgttcacagtgctgctgcac
ctgaagaatgagctgaaccgaggagattttttcatgacgcttcggaaccagcctatggcc
ttaagtttgtaccgacagttctgtaagcatcaggagctggagacactgaaggacctttac
aaccaggatgacaaccaccaggagctgggcagcttccacatccgagccagctacgctgca
gaggagcgaattgaggggcgagttgcagctctacagacggcagccgacgccttctacaag
gccaaaaatgagtttgcagccaaggctacagaggatcagatgcggctcctacggctgcag
cgacgcctagaagatgagctggggggccagttcttagacctgtctctacatgacacggtc
accaccctcattctcagtggccaaaacaagcgtgcggagcagctggcacgtgactttcgc
atccctgacaagaggctctggtggctgaagttgactgccctggcagatttggaagactgg
gaggagctagagaagttttctaagagcaagaaatcacccattggctacctgccctttgtg
gagatctgcatgaagcaacacaataaatatgaggccaagaagtatgcttcccgtgtgggt
cctgagcagaaggtcaaggccttgcttcttgttggggatgtggctcaggctgcggacgtt
gctattgaacaccggaatgaggcggagatgagcctcgtattgtcccactgcactggagcc
acagatggggccacagccgacaagattcaacgggcccgggcacaagcccagaagaaatga
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