Bos indicus (zebu cattle): 109567255
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Entry
109567255 CDS
T04792
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109567255 (COL20A1)
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GFIT
Motif
Pfam:
fn3
VWA
Pur_ac_phosph_N
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
109567255
NCBI-ProteinID:
XP_019827614
UniProt:
A0A6P5CQT5
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Position
13:complement(54943603..54966768)
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AA seq
1301 aa
AA seq
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MSVRVRPYLGVGLCLYLSVTLGLSQGQASGRLRLAVLPEDRLQMKWRESEGSSLGYLVQV
KPRAGDPEQEVMLTTKTPKATVGGLSPSKGYTLQIFELTGSGNILLARREFVIEDLKSNS
VSRSSQRPLGATLEPTPSLVGSPDLEPPGALAPSQDPPTLGGAKSGDGVPGEEQHPPRGP
TGEGPAQPTPDLEGPNHARTSAGGRGKPGRPQFRCTPPMPVDMIFLVDGSWSIGHSHFQQ
VKDFLASVIEPFEIGPGKVQVGLTQYSGAPQTEWDLNAFGTKEEVLNAVHNLHYRGGNTF
TGLALTHVLEQNLKPRAGLRPEAAKLVILVTDGKSQDDAHAAGHVLKGLGVDIFAVGVKN
ADETELRLLASQPLDITVHNVQDFPQLSTLSGLLSRLICQKVQGRSPRGSPATPALDPPP
APTRLVLTQVTSSSVLLSWSLAPQPPLKYLIVWRPSKGGTPREVVVEGPTSSAQLHNLTS
STEYLVSVFPLYKAGVGEGLQGLATTAPLPPPQALTLAAVTPKTVRLTWQPSAEATQYLV
RWSPASPKGEEERREVRVGRPEVLLDGLAPGRDYDVWVQSLRGAEISEAQGIRARTPALT
TPRHLSFSDVSHDSARVSWEGTARPVRLFRVSYISGKGGHSGQTEVPGNATSAILGPLSS
STTYMVRVTCLYPGGSSSTLTGRLTTRKVPSPSQLSVTELPGDEVRLEWAAAAVSGVLVY
QITWTPLGEGKAREISVPGNLGTAILPGLGRHSEYEITILAYYRDGARSDPVSLRYTPVS
RSPPSNLALASESPDSLQVSWTPPSSHVLHYRLSYALASGSGPEKSISIPGPGSHVTIPD
LLAATKYRVLVSAIYGAGESVAVSATGRTACPALHLDGSLPGFDLMAAFGLVEKEYASIR
GVAMEPSAFGPTRTFTLFKDSQLTRRASDIHLATLPPEHTVVFLLRLLPETPREAFALWQ
VASEDFQPILGVLLDAGRKSLTYFNRDPRATLQEVTFDLPEVRRIFFGSFHKVHVAVGRA
RVRLYVDCRKVAERPFGEAGGLPAAGFVMLGRLAKARGPRSSSASFQLQVLQIVCNDSWA
EEDRCCELPASKEXESCPAFPSACACSSQTPGPPGPQGPPGLPGRNGAPGEQGFPGPRGP
PGVKGEKGDHGHPGLQGHPGLQGTPGKIGIQGPKGMRGLEGTAGLPGPPGPRGFQGTAGA
RGSNGERGPPGAVGPTGLPGPKGERGEKGEPQSLATIYQLVGQASHVLKLHACTHESTRP
PMPILEAPRALGTSNKARLPGEGGHGGPHPGDRGRSPCCLK
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccgcgtgcgcccttacctcggagtcggcctctgtctgtatctgagtgtcacc
ctggggctcagccagggacaagcgagtggccgcctgaggctggcagtgctgcctgaggac
cggctgcagatgaagtggagagagtcagaagggagcagcctcggctacctggtgcaggtg
aagcccagggcaggggacccagagcaggaggtgatgctgaccaccaagacccccaaggcc
actgtggggggcctgagcccctccaaggggtacaccttgcagatcttcgagctcactggc
tcagggaacatcctgctggctcgcagggagtttgtgatcgaggatctgaagagtaactcc
gtgagcaggagcagccagaggccactgggggcaaccctggagcccaccccttcccttgtg
gggagcccagaccttgagcccccaggggccctggccccaagccaagatccacccacgctt
ggtggagccaagtcgggggacggagtacctggtgaggagcagcacccacccaggggcccc
acaggggagggccctgctcagcccaccccagacctggaggggccgaaccatgccaggacc
tcagctggagggagagggaagccaggaagaccccagttccgctgcacaccccccatgcct
gtggacatgatcttcctggtggatgggtcctggagtataggccacagtcacttccagcag
gtcaaagacttcctggccagcgtcatcgagccctttgaaattgggccgggcaaagtccaa
gtaggtctgactcagtacagtggagccccccagaccgagtgggacctgaatgcctttggc
accaaggaggaggtgttgaatgctgtgcacaacctccactacagaggaggaaacacattc
acaggcctggccctgacccacgtgctggagcagaacctgaagcccagagcaggtctccgt
ccagaggcagccaagctggtgattctggtgacagatggcaagtcccaggatgatgcccac
gctgctggccacgtgctcaagggtctgggtgtcgacatctttgctgtgggcgtgaagaat
gccgacgaaaccgagttgaggctcctggcatcccagccgctggacatcaccgtccacaat
gtgcaggacttcccccagctcagcacactctccggcctactcagccggctcatctgccag
aaggtccagggcaggagcccgcgtgggagcccagctacaccggccctggatccccctccc
gctcccacaaggctggtcctgacccaagtgacctcctccagcgtcctcttgtcctggagc
ctggccccacagccgcccctcaagtacctgattgtgtggaggccttccaagggcggcacc
cccagggaggtggtggtggaagggcccacctcgtcagcacagctgcacaacctgacctcc
agcaccgagtacctggtctctgtgttccccctctacaaggctggcgtcggcgagggcctg
cagggcctggcgaccacagcacccctgcccccaccccaggcgctgaccctggctgcagtg
acacccaaaactgtccgcctcacctggcagccctcggcagaggccacccagtacctggtg
cggtggtcacctgcctcccccaagggcgaggaggagaggagagaggtgcgggtggggcgg
ccggaggtgctgctggatggcctggccccgggcagggactatgacgtgtgggtgcagagc
cttcgaggggcagagatcagtgaggcccagggcatccgtgccaggacccccgccctgacc
acccccagacacctgagcttctcagacgtgagtcatgattcagcccgcgtgtcctgggag
ggcaccgcaagacctgtgcgcctgttcagggtcagctacatctcgggcaagggaggccac
tcgggacagacrgaggttcctgggaacgccacctcagccatcctggggcccctctcctcc
tctaccacctacatggtccgcgtcacctgtctctaccctgggggcagctcctctaccctg
accggccgcctgaccacacggaaagtccccagcccgagccagctgtcggtgacagaactg
cctggggacgaagtccggctcgagtgggcggccgcggcggtgtccggcgtgcttgtctac
cagatcacgtggacgcccctgggagaggggaaggcccgtgagatttctgtcccggggaac
ctgggcacagccatcctgcctggcctggggaggcactcagagtatgagatcaccatcctg
gcctactaccgggacggggcccgcagtgaccctgtgtccctccgttacacccccgtcagc
cggagcccaccctccaacctggccttggcctcagagtcgcctgacagcctgcaggtcagc
tggacgcccccgagcagtcacgtgctccactaccggctctcctacgcgctggcctcaggc
tctggacccgagaagtcgatctccattccaggacccgggagccacgtgacgatccctgac
ctgctggcggctaccaagtaccgggtcctggtctcagccatctatggagcaggggagagc
gtggcggtgtctgccacaggccggacggcctgcccggccctccacctggatggctccctc
ccaggctttgacctgatggcggccttcgggctggtggagaaggaatatgcctccatccgc
ggcgtggccatggagccctcggcctttggccccaccaggacgttcacactcttcaaggac
tctcagctgacccggcgggccagcgacatccacctggccaccctgcccccggagcacaca
gtcgtcttcctcctgcgcctgctccctgagackccccgagaggcctttgcattgtggcag
gtggcaagcgaggacttccagcccatcctcggggttctgctggacgccggcaggaagtcg
ctgacctacttcaaccgtgaccccagggccaccttgcaggaggtcacctttgacctgcct
gaagtgaggaggatattctttgggagtttccacaaggtgcatgtggccgtgggccgcgcc
agggtcaggctctacgtggactgccggaaggtggccgagaggcccttcggggaggccggc
ggcctgcctgctgccggcttcgtcatgctgggcaggttggccaaagcccggggcccccgg
agcagctccgcctcgttccagctccaggtgctacagatcgtgtgcaatgactcgtgggca
gaggaggacaggtgctgcgagctcccagcatcgaaggagsgagagtcctgtcctgccttc
ccatctgcctgtgcatgttcctcacagacccctgggcccccaggcccccaaggacctccg
ggcctccccgggcggaacggagccccaggagagcaaggcttcccagggcccaggggtccg
ccaggggtcaaaggagagaagggggaccatggacaccccggcttgcagggccaccccggc
ctccagggcacccccgggaagattggcatccagggaccgaagggaatgagaggcctggag
gggactgctggactgcctggccccccaggccctaggggcttccaaggtactgcgggggct
aggggcagcaacggcgagcgaggacccccaggggccgtggggcccacaggactgccgggg
cccaagggggagcgaggagagaagggagagccacagtccctggccaccatctaccagctc
gtgggccaggcttcgcacgtgttgaagctccatgcctgcacccacgagagcacccggccc
cccatgcccatcttggaagcccccagggcccttggcacaagcaacaaggcccggctccct
ggagaaggggggcatggtggcccccaccctggggacagaggacggtccccctgctgcctc
aagtga
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