Bos indicus (zebu cattle): 109567457
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Entry
109567457 CDS
T04792
Symbol
CHD6
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109567457 (CHD6)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109567457 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
109567457
NCBI-ProteinID:
XP_019827987
UniProt:
A0A6P5CT29
LinkDB
All DBs
Position
13:complement(70757074..70907602)
Genome browser
AA seq
2721 aa
AA seq
DB search
MIMKIQKKEKQLSSLKVPNHSPMSDASVNFDYTSPSPFDHSTDQEEKIEDVASHCPAPKE
LYDVEEEAGPLFPRKTASHNGMEDSGGGGTGVKKKRKKKDPGEHEGAAKGSKDREPKPKR
KREPRELKEPRKAKEPRKAKEPREPKQKDGTKKTRKPREASGPREAKEKRGGPDAAARTK
SRKASKEQGPTPVEKKKKGKRKSETAVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLSKGANQHNMPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKSEKESLVLDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLL
SAEQGVTDGASDVPERGHTDKEDNTEDKVDGLQKQMESSSDGGDGLFAEKKDDTRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEVLGLGNQSYWVQEEMFRRSSEME
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRVISRLDKKSDESLEHYFY
SFVSMCRSVCRLPAWKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLTCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYVMTDPQLSFLDAYRNYAQHKR
PDPQAPESLCCLYQTNSKLYESLAYTHMSRTSESLENEPENLMKIEAGDDHLGPPRGSLS
DMTCESFISKTQDVLSLTHDEXLLPGSLETMMYGKKALSQEPGPFQXSTGASTESRQDTA
AISAGRDGNCQPRGHEAKIASDPSFMETLEAGVAQMNIKNEKHLLISLSKEGELGCSEAG
PRPERIGQLDPNCFASPSLDPGNESGFVDMCNLSVCDSRRNVSSDQQLIDLLESKSLESK
LVLGPNHSDEEDDEDENEEESLELAAGRRERLAASPLSEPTTRMAGEQSLAGFLTEEAKK
GSTEARSQPPGPQGPFLPTACQCHCKHVERWARGLEKDEFEVEKPQAYPPDPFTSKANNV
TVRGEPTAVPPELLQVKQELLKEPWKESTEGNQGLPPYPEGSELKPEDMDYESKEEXDKD
GNCQSQDYPGKYSEEESKSSTSGITGDLGDDLQEARAPTIAQLLQEKTLYSFSEWPKDRV
IISRLDNICHVVLKGKWPSSQQHEPSGTLPTPVLTSSTGPRGGISEPEASEHSSSSGAAW
VAQMQKESFLAPVFTKDEQKHRHPYEFEVERDAKTRSLEQFSASHGHPPIVLNGWHGESA
IDLSCPSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAASRRRRGRRKHVDGGVDLIFLKEQTLQAGILEVHEDPGQAPLSTPHPPEGPVPA
TSTPEPTPAAGSPAEKAIPSKSLLDWLRQQADCSLEVPGFGANFSDKPKQRRPRCKEPGT
LDVTSLSGEERVPAVPKEPGLRGFLPENKFNHTLPEPVLRDAGPRRRGMRPRSELLKTPA
LXADAPSGMGPLFMNGLIAGMDLVGLQNMRNMPGIPLTGLVGFPAGFAAMPPGEEVKSTL
SMLPMVLPGMAAVPQMFGVGGLLNXPMATTCASAVPAPLSSTTKGGVSAAEKTAEDQPGS
HNVKTDPSAEDKPGPSPFSSDQPEPAITTSSPVAFNPFLIPGVSPGLIYPSXFLSPGMGM
ALPAMQQARHSEAAGLESQRRKRKKTKGDAPNPNPEPVPGLEREPGSEQSCPEPRAPAPP
DREHAAQAREGGPQDSHGDTN
NT seq
8166 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaagtctaaaagttccgaatcac
tccccaatgtctgatgcctctgtcaattttgactatacatccccctccccatttgaccac
agcactgaccaggaggagaaaatcgaagatgttgccagtcactgtccagccccaaaggag
ctgtacgacgttgaagaggaggctgggccccttttccccaggaaaacggcgtcccataac
ggtatggaggacagtggtggaggaggcacgggcgtgaagaagaaacgcaagaaaaaggat
ccaggggagcacgaaggggcagcaaagggaagcaaggacagggagcctaagccaaagagg
aagcgtgagcccagagagctcaaggagcccaggaaggccaaggagcccaggaaggccaag
gagcccagggagcccaagcagaaggacggcaccaagaagacgcggaagccccgcgaggcc
tcgggccccagggaggccaaagagaagaggggcggccctgacgctgcagccaggaccaag
tccaggaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaactgcagtggagagtttagagctggaccagggcttgccgaacccatcc
ctgcggagccccgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caagtgaagcgcagaaaatacaacgaagacctggacttcaaggtggtggacgatgacggg
gagaccattgctgtgcttggggccggccggacgtccgccctctcagcttcgaccctggcc
tggcaggcggaggarcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggtccacccgggagaacccccattcgacctggagctgttctacgtc
aagtatagaaatttttcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gaccctcgcatcgcacagaagatcaagcgatttaggaataagcaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaacccagactatgtggaggtcgatcgcatc
ttagaggtggcccataccaaggatgcagaaaccggagaggaggtgacgcattacctggtg
aagtggtgctcactgccctacgaagagagcacttgggaactggaggaggacgtggatcct
gccaaagttaaagaattcgaatctctgcaagtgctccccgaaatcaagcacgtggagcga
cccgcttcagactcctggcagaaacttgagaagtcgcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgcattttggccgatgagatgggcctagggaaaaccatccagtccatcacgttcctt
tcagaaatattcctcaggggcatccacggccctttcctcatcatcgccccactctccacc
atcaccaactgggagcgggagttccgaacgtggacagaaatgaatgccatcgtgtaccac
ggcagccagatcagcaggcagatgatccagcagtacgagatggtgtacagagatgcacag
ggaaaccccctgtcaggtgtcttcaagttccatgttgtcattacaacatttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcatcgatgaagcc
cacaggttgaagaacaggaactgcaagcttctggagggcctgaagctcatggccctggag
cataaggtgctgctcacggggacgcccttgcagaactcggtggaggagctcttcagtctg
ctcaacttcctggagccatcacagttcccttcagagactgctttcttggaggagtttgga
gatctgaagacagaggagcaggtgaagaaactgcagtctatcctcaaaccgatgatgctt
cggcggctaaaagatgacgtggaaaagaacctcgctcccaagcaagagacaatcatcgaa
gtagagctgaccaatatccagaagaagtactaccgagccatcctggagaagaacttttcc
ttcctgagcaagggggccaaccagcacaacatgcccaacctcatcaacaccatgatggag
ctgaggaagtgctgcaaccatccctacctgatcagcggggcagaggagaaaattctggag
gacttccggaaaacccacagccccgatgccccggactttcagctgcaggccatgatccag
gccgcagggaagctggtgctgattgataaactgctccctaagctgatcgctggcggccac
aaagtgctcatcttctcgcagatggtgcgctgtctcgacatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacgcga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccggtgtcaccggataggccagagtaaa
gccgtgaaggtgtatcgcctcatcacgcggaattcctacgagcgggaaatgttcgacaag
gccagcctgaagctgggcctggacaaggccgtccttcaggacatcaaccggaagggcagc
acgaatggcgtacagcagctctcaaagatggaggtagaggacttgctccggaaaggtgcc
tatggcgccttgatggatgaagaggacgaaggctccaagttctgtgaagaagacatagac
cagatcctgcagaggaggacacataccatcaccatccagtctgaggggaaaggatccact
ttcgccaaggctagctttgtggcttcaggaaacagaacggatatttccttagatgaccca
aacttttggcagaagtgggctaaaatagctgaactggacactgaagcaaagagtgagaag
gagagcctggtgctcgaccgcccgcgcgtgcggaagcagaccaaacactacaactctttc
gaggaggacgagctcatggagttttcggagctggacagcgactctgacgagaggcccaca
aggtcccggcgcctcaatgacaaaaccaggcgctacctccgggccgagtgcttccgggtg
gagaagaacctgctcatcttcggctggggccggtggaaggacatcctgacgcacgggcgg
ttcaagtggcatctgaacgagaaggacatggagatgatctgccgggccctgctggtgtac
tgcgtcaagcactacaaaggggacgagaagatcaagagcttcatctgggagctgatcacg
cccaccaaagacggacaggcccagacactccagaaccactcaggcttgtccgctccagtc
cccagagggaggaaggggaagaagacgaagaaccagctgctgctcccggagttaaagaac
gcagactggctggccacctgcaaccccgaggtggtcttacatgacgatggctacaagaag
cacctcaaacagcactgcaacaaggtacttctgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaagcagctgataaagcatttgaaggaactccagccagggarctg
gacgtgcccctgcctgacatcgactacgtggagatcccggtggactggtgggacgctgag
gccgacaagtccctcctgattggtgtgttcaaacacggttacgagaggtacaacgccatg
cgagccgacccagcactttgcttcctggagaaagtgggcatgccagacgagaagttgctt
tctgcagagcagggtgtcacagacggggcctcagacgtccccgaaagaggccacacagat
aaagaagacaatacagaagacaaagtagacggcctccagaaacaaatggagagttccagt
gatggaggtgatggcctttttgctgaaaagaaggatgacacccgggcagcccaggatggc
tccgacccagacaaatcaccctggcctgtttcatccgcactcactgctcgtctccgacgc
ctggtcaccatttaccagcgctgtaaccgcaaggagctctgccggcctgaagtcctggga
ctaggaaaccagagctactgggtccaggaagagatgttccggaggtcctcagagatggag
ctcatcaacaaggaagcccaaaagaggtggacaaggagggagcaagccgacttctacaga
acagtgtcttcctttggtgtcgtttatgatcaagagaagaaaacytttgactggacacag
tttcgcgtcatttcccgtctggacaagaagtcggacgagagcctggaacactatttctat
agcttcgtgtccatgtgccgcagtgtctgtcgtctgccagcctggaaggatggtggcccc
ccggatcccagcatctacgtggaacccatcactgaagagcgggccgcgagaacgctrtac
cgcatcgagctgttgcggaaggtgcgggagcaggtgctcacgtgtcctcagctgcacgag
cgcctgcagctctgcaggcccagcctgtacctgcccgtctggtgggagtgtgggaagcac
gaccgcgacctgctgatcggcaccgccaagcacggcctgaaccgcaccgactactacgtc
atgaccgacccccagctgtccttcctggatgcctacaggaactacgcccagcacaaaaga
cccgacccccaggccccagagagtctctgttgcctctaccagaccaactccaaactgtat
gagtctctggcctatacgcacatgagccggacttccgagtcccttgaaaacgaacccgag
aacctcatgaaaatcgaagctggagacgatcaccttggtccgcccaggggcagcttatct
gacatgacctgtgaaagcttcatctctaaaactcaagatgtcctttcccttacccatgac
gagartctgctgcctgggtccttggagaccatgatgtacgggaagaaggcgctaagccag
gagccaggcccttttcagngcagcacgggtgccagtactgagtccaggcaagacaccgcg
gccatctccgcaggcagagacggaaactgccagccccggggccacgaggcaaaaatagcc
tcagacccctcttttatggaaactttagaagcaggagtagctcagatgaacattaaaaat
gagaaacacctgttgatatctctttcaaaggaaggggaactcggctgcagcgaggcagga
ccaagacctgagagaatcgggcagctggaccccaactgctttgcctccccttccttggac
ccagggaatgagagcgggttcgttgacatgtgcaacctgagtgtctgtgactccagaaga
aacgtgtcatcagaccagcagctaatcgacttactagaaagcaaaagcttagaaagcaaa
ttggttttgggtccgaaccacagcgacgaggaggacgacgaggacgaaaacgaggaggaa
agtctcgagctggccgcaggcaggcgggaaaggctggcagcgtcgcctctcagcgagccc
accacccgcatggcaggggagcagagcctggccggcttcctcacagaggaagccaagaaa
gggagcacggaggccagaagccagcctcctggaccacagggccctttccttcccacagcc
tgtcagtgtcactgcaaacacgtggagaggtgggcacgcggcctcgagaaggacgagttt
gaagtggagaaaccccaggcttaccccccagaccccttcacaagcaaagccaataatgtc
acagtgaggggcgagcccactgctgtcccacctgagctgctccaggtgaagcaggaactg
ctgaaggaaccctggaaagagagcacagaagggaaccaaggtctccctccgtatcctgaa
gggagtgagctcaagccggaagacatggattatgagagtaaagaggagttsgataaagac
gggaactgccagagtcaagattatccagggaagtactctgaggaggagagcaagagctcg
acctcgggcatcacgggagacctcggggacgacctgcaagaggcgcgggctcccaccatt
gctcagctgctccaggagaaaacgctgtattcattctccgagtggccgaaggatcgcgtg
ataatcagccgcctagataacatctgtcacgtggtgttaaaggggaagtggccctccagc
cagcagcacgagccctcgggcacgctgcccacccccgtgctaaccagcagcactggtccc
cgaggcggcatctcagagccggaggcatcagagcacagctccagcagtggygcagcgtgg
gtggcccagatgcagaaggagagcttcttggctccggttttcacaaaggatgaacagaag
cacaggcatccttacgagttcgaggtagagagggatgcgaagacccggagcctggagcag
ttctcrgcctcccacgggcacccccccatcgtcctcaatggctggcatggagagtcagcc
atagacctctcctgcccatcggaggggtccccaggggccacgtcccctttcccagtgagc
gccagcacccccaagatcggggctattggttcactgcaaggagcccttggcatggacttg
tcggggatcctgcaagctggcctgatccacccagtgaccggacagattgtcaacggaagc
ctcaggagagatgacgctgcctccaggaggcggagaggaaggcggaaacatgtcgacggc
ggggtggacctcatcttcctgaaggagcagaccctgcaggcgggcatcttggaagtccac
gaagacccaggacaggcccccctgagcaccccacaccctcctgaagggccggtgcccgcc
acgtcraccccggagccgaccccggccgctggcagcccggccgagaaagccattcccagc
aagagcctgctggactggctgcggcagcaggccgactgctccctcgaggtcccgggcttc
ggcgcgaatttttcagacaaaccaaagcagaggaggccacgctgtaaggaacctggaacg
ttagacgtcacctctctgagtggggaagagagggttcctgctgtccccaaggagcccggc
ctgagggggtttctcccagaaaacaagttcaatcacaccctgcccgagcccgttctccga
gacgcaggcccccgccgcaggggcatgcggccacggagtgagctgctgaagaccccggcc
ctggyggcggacgccccctccgggatggggccgctgttcatgaacggcctgatcgccggg
atggacctggtcgggctgcagaacatgagaaacatgccgggtatccccctcacggggctg
gtgggcttcccagccggcttcgcggcaatgcccccaggcgaggaggtcaagagcacgttg
agcatgctgcccatggtgctgccgggcatggccgccgtgccccagatgttcggrgtcggg
gggctcctcaacrcccccatggccaccacctgcgcctcggccgtgccagcgcccctgtca
agcacaaccaagggtggcgtgtcggcggccgaaaagactgcggaagaccagcccggcagc
cacaacgtcaaaacggacccgtcggccgaagacaagcccggccctagccccttttcctcc
gaccagcctgagcccgcaataactacgagcagccccgtggcgtttaacccgttcctcatc
ccaggtgtttcccccggactcatctacccttccaygttcctctcccccggcatgggcatg
gcgctgccggccatgcagcaggccagacactcggaagcagcaggtctggagagccagagg
aggaagcggaagaagaccaagggggacgccccgaaccccaacccagagcctgtgcccggg
ctggagagggagccgggcagcgagcagagctgcccagagcccagggcccccgcgcccccc
gacagagaacacgcagcacaggcccgggaagggggcccscaggactctcacggtgacacc
aattag
DBGET
integrated database retrieval system
