Bos indicus (zebu cattle): 109567799
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Entry
109567799 CDS
T04792
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
109567799 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
biu03032
]
109567799 (RIF1)
DNA replication proteins [BR:
biu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109567799 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
HEAT_ULK4
Motif
Other DBs
NCBI-GeneID:
109567799
NCBI-ProteinID:
XP_019828379
UniProt:
A0A6P5CT05
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All DBs
Position
2:complement(46794429..46852608)
Genome browser
AA seq
2465 aa
AA seq
DB search
MTAADQSPLAPLLETLEDPSASLGEQTDAYLTLTSRMTGEDGKEIITEIEKKLPQLFKVL
KTHIASQNSELSSAALQALGFCLYNPKIASGLSEINIQELLSKLNDIVKSSDKNVRTRAL
WVISKQTFPTEVVGKVVSSIIDSLEIVFNRGEMLSAVVDYEALNVIIRLIEQAPVQMGEE
SIRWAKLVIPLLVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGSSSRVATTPGLSPMTPVHKGASPYGTPVTPRMNLNSNFGMA
TIPSIQLLGLEMLLHFLLGPEVVSFAKQNKLILSLEPLEHPLISSSSFFSKHSNTLITAV
HDSFVAVGKDASDVVINAIWKELISLVKSVIESGNKKERPGSEVLTLLLKSLESIVNSEV
FPVLKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLTFNNNLLECGVEDE
RFFLNLETLVGCVLSGPTSPLAFSDSVLNVVNQNAKQLDNKEHLWRMWSIIVTPLTELIN
QTNEVNQGDALEHNFSAIYGALILPINHIFPAQKIPVVTMKTLLKTWSELYRAFARCAAL
VATAEENLCCEEFCSKIMSSLEDEGLSNLLFLDRITHIITVMVDCIDFSPYNIKYQPKTK
SPQRPTDWSKKKKEPLGKLASLIKLIVRVIYSFHTLSLKEVHSDTLLTIGNSITSILSNL
LGHISLPSMIQKIFAALTRPLALFYENSKLDEVPKVYSCMNNKLEKLLGDIIACLHVSYT
GTYDSELLEQISPLLCIIFSHKNKQIRKQSAQFWNATFAKVTMLIYPEELKPILKQAKQK
SLLLLPGLENVEIMEESSGPYSDMTENSQLNMKISGMERKSSGKRDSFLAQTKDTKDSMK
PPAKLKLDSSTPKAKGEMPLEEEKSTDFVFIPPEVKETKERILTEHQKEVLKTKRCDIPA
MYNNLDVSQDTLFSQYSQEESMEISTLIEKSKEDSKMIFKEEQKENDIVVPQHVMENCGM
DEHLEKASLLNNECGSIEETSPKILSSNNDARKKALIASNKPTECASTTENPSGVSSSSV
SIATISGAPLQPTSRRQSFITLEKFDGSENRPFSPSPLNNMSSTVIVKSNQEGMGKTDNP
SKAKKREVALSKSDSEKITHGTKRSSRRSSKSEPIGSKKSKPLMRSEQEKSTQESVDGTV
ALENNPPGLLNQTECVLDNQVHLSESTVEFEDTMLESTVENTVLENNTVEERTLEVNLES
KENTPPAIITDQTVNEDSHIQVTPNQKTLRRSLRRRSETAEPTTDSQDKENNHQKRERRK
EEEKTPQKSPLHVKDDVLPKQKLISEQSVQGNLVDKGNNLHEKAFGETSANAEIDENRRK
PDLENTKSEGDGVPDIADKSSEKPVRGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSK
KKRSGKWKNKSSDNVDMEDQEEKMVKQECIKIENQAHDYKGNPEVDKDIKSQICEKGDES
TTVSLQDSTVSPDLLQVYDDVLNTSEGESKSNKDADHSFSNPSVPESNLRTRNASKRLHK
RDSIENSMGESSKIGTSDISLLSEKTLQTVECQHKRSRRVRRSKGCDCCGEKSQSQEKSF
TGLKDTENYDVKVSETKKTDGETPVSISETSKADLSSEVKLLDEHHSVNFHLDLKEENDT
TNDSLIISETELKENTTQSFLPSEMVKFKETSRRDSEEAISLETQEPSNKKCKTVDPHLD
VSKDISLKCFSLETKEEKSEATSKEKLSTENIVIVESNAESNPEVDAMELNVENDQSEAG
FSEQKNVKTGIPGKEVTEENSERMDTPEKLKANEAVTEEFNSATDYSDTPTSVKVNAQVE
ISEQTAVGELGGGSDESDPGSSEEMNAEMKNCEKTAVCEVTTESDHVTETEDEDVTTTAS
LPIEVETKELDVEVNNFVPDTLEMITEEGKVDPNKTETNTEPNKLEETQLDDNQMVVESN
ETLPEVHHTSEKVEEIAQPLTSETDISGLISEDSNTSPQKSKDIDPLLMSANESPSGMHT
RCVWSPLASPSTSILKRGLKRPQEDEISSPVHKVRRVSFADPIYQAGLADDIDRRCSIVR
CHSSNSSLMVKSVKTSPTVQSKHNTTSAKGFLSPGSRSSKFKSSKKCLIAEMAKESVPCP
TESVYPALVNCVAPVEIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLPIR
SPKVSNVKKALRIYHEQQVKSRGLEEIPVFDISEKTINGMENKSISPDEERLASDLIDPV
ALEAPLSKNLVAQISALALQLDSEDLYNYSGSQLFEMHEKLGSMANSIIKNLQSRWRSPA
HENSF
NT seq
7398 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcggatcagagccccctggcaccgctgttggagactttggaagacccttcc
gcctcccttggagagcagaccgacgcttacctgaccctgaccagtcgtatgactggagaa
gatggaaaagaaatcattacagaaattgagaaaaaacttcctcagctatttaaagtttta
aagactcacattgccagtcaaaactcagagctcagtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattgcctctggattatcagagataaatattcaagaactg
ctttcaaaactgaatgatattgttaaaagttcagataaaaatgtacgtactagggcactt
tgggtgatatccaagcagacgtttcccactgaagtcgttggcaaagtagtttctagtatc
attgactcactagaaatagtatttaatagaggagagatgctttctgctgttgtggattat
gaagcattaaatgtcattataagactaattgaacaagccccagttcaaatgggagaagag
tcaattaggtgggcaaaattggtcatacctttactggttcattcagcccaaaaagtacat
ttgcggggagccactgctctagagatgggaatgcctttgttgcttcagaaacagcaagaa
atagcatctatcacagagcagcttatgactaccaaattactttcagaactccagaaactg
tttatgagtaaaaatgagacttatgtgttaaaattgtggcctttatttgtcaaacttctt
gggaagaccttgcatcgaagtgggagtttcattaattctctgttacagctggaagaactg
ggatttcgtagtggagcacccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttaaatccagaaatactgtgtagtgcaaaaagactgaagttgttg
atgcagcctttgagttctatccatgtgagaacagaaactctagcgctgacaaaactagaa
gtctggtggtatttgttgatgagactaggacctcatcttcctgctaattttgaacaggtt
tgtgtgcctctgattcagagcacaataagcattgattctaatgcttcacctcaagggagt
tcatctcgtgtagctactactccaggtttaagccctatgaccccagtacacaaaggtgct
tctccatatggaactcctgtaacccctcggatgaacttgaattcaaattttggaatggcc
acaatcccctctatacaacttttggggcttgaaatgttgcttcattttttgttgggtcca
gaagtcgtgagttttgctaagcaaaacaaacttatactgagcctagaaccacttgaacat
ccattaatcagcagctcttcttttttctccaaacactcaaatacacttatcactgctgtt
catgatagctttgttgcagttggaaaagatgcttctgatgtagttattaatgctatttgg
aaggagttaattagcttggtgaagtcagttattgaatcaggtaacaaaaaagagagacca
ggttctgaagttttgactctcttattaaaatctttggaaagcatagtgaattcagaagta
tttcctgtattgaaaacactggttctcatggaaattacaattaaaggacttcctcagaaa
gtattaggttctccagcatatcaggttgctaatatggatattcttaatggaacccctgct
ttgttcttaattcagttaactttcaataataatctattggaatgtggtgtggaagacgaa
aggttttttctcaacctggaaacacttgtgggctgtgttctttcgggtccaacttcacca
ctcgctttcagtgactctgtcttaaatgttgtcaatcaaaatgcaaagcagttggataac
aaggagcatctttggagaatgtggagtattatagtcaccccattaacagaattgattaat
cagaccaatgaagtgaatcaaggggatgccttagaacataatttcagtgctatctatggt
gcactgattttgccaataaaccatatttttccagcacaaaaaattccagtggtcaccatg
aagaccttacttaaaacttggtcagaattatatagagcatttgctcgctgtgcagctttg
gtggcaactgcggaagagaatttatgctgtgaggaattttgttccaagataatgtccagt
ttggaagatgaaggcctttcaaatttattgttcttggataggatcactcatattattact
gtaatggttgattgcatcgacttttcaccatataatattaaatatcaacccaaaactaaa
tcaccacagagacctacagattggtccaaaaagaagaaggaacctttagggaagttggct
tctttaattaaacttattgtgagagtgatctattcttttcacacactgagcctcaaggaa
gtacattctgatactctcctcactattggcaactcaatcaccagcattctttccaattta
cttggacatatttctctgccttctatgatccagaaaatatttgcagctttaacaagacct
ctggcattattttatgaaaactcaaagcttgatgaagttcctaaagtgtatagttgtatg
aacaacaagttagaaaagctactaggagatataattgcttgtctacatgtcagctacact
ggaacttacgacagtgaacttcttgaacagatctcaccattattatgcataatattttca
cacaagaacaaacagataagaaaacaaagtgctcagttctggaatgccacatttgctaaa
gtgacgatgttgatttatcctgaggagttaaagccaatactgaaacaagccaaacaaaaa
tctctgcttttattgcctggtttggaaaatgttgaaattatggaggaatccagtggacca
tattcagatatgacagaaaattcccaattaaatatgaagataagtggcatggaaagaaaa
tcaagtggaaaaagagattcttttttggcacaaacaaaggatacaaaagacagtatgaaa
ccaccagctaaattgaaactagattcttcaactccaaaagcaaagggtgaaatgcctttg
gaagaagaaaagtctactgactttgtgtttatacctccagaagtaaaagaaacaaaggaa
agaatactaactgaacaccagaaagaagtactcaaaacaaagaggtgtgatattcctgcc
atgtataataatctggatgtttcacaagatactttattttctcagtatagtcaggaagaa
tctatggaaatttctactttaattgaaaaatcaaaagaagactccaagatgatatttaag
gaggaacaaaaggagaatgacattgtcgttcctcaacatgtcatggaaaactgcggtatg
gatgaacatcttgaaaaggcttcccttttgaataatgagtgtggttctattgaggaaacc
agtccaaaaatactgagcagtaataatgatgccagaaaaaaagctttaattgcttcaaat
aaaccaacagaatgtgcatctactacagaaaatccatctggtgtcagcagtagctcggtt
tctattgccaccatttctggagctcccttacagcctacaagtcgaaggcaatcctttatt
actttggaaaagtttgatggttcagaaaatagaccttttagtccatcacccttgaataat
atgtcatcaactgtaatagtgaaaagtaaccaggaaggcatgggtaaaacagataatcca
tcaaaagcaaagaagagagaagtggctctttccaaatctgactctgaaaaaataacacat
gggactaagagatcaagccgaaggtcgagtaaatctgaaccaatagggagtaaaaagtct
aaacccttaatgagatctgaacaagagaaaagtactcaagaatctgttgatggcacagta
gccttagaaaataacccacctggcttgcttaatcagacagaatgtgtgttagataatcag
gttcatctctctgaatctacagtggagtttgaggatacaatgcttgaatcaacagtggag
aatactgtattagaaaacaatactgtagaagagagaaccttagaagttaacttggaatcc
aaagaaaacacacccccagccataataacggatcagacagtaaatgaggatagtcatatt
caggtaactccaaatcagaaaacccttaggcgatctttaaggcgacgttcagaaacagca
gaaccaaccactgatagccaagataaagaaaataatcatcaaaaaagggaaagacgtaaa
gaagaagaaaagactccgcagaagagtccgttacatgtaaaagatgatgttttacctaag
caaaaattgatttctgaacaaagtgtacagggaaacttagttgacaaaggaaataattta
catgagaaggcttttggggagaccagtgctaatgctgaaattgatgaaaatagaagaaag
ccagatcttgagaatactaaatctgaaggagatggtgtgccggacattgcagataaatcc
tctgagaaaccagtaaggggacgaacacgataccaaacaagaagagcatcccagggttta
ctttccagcattgaaaactcagaatctgatagttctgaggcaaaagaagaaggttctaaa
aagaaaagatctggaaaatggaagaacaaaagcagtgacaatgttgacatggaagatcaa
gaagagaaaatggtaaaacaggaatgtataaaaattgaaaatcaggcacatgattataaa
gggaatcctgaagtagacaaagatataaaatctcaaatctgtgaaaaaggagatgaaagt
actactgtaagtcttcaagattctaccgtatctccagatttattacaagtttatgatgat
gtattgaatacttctgagggagaaagtaaaagtaacaaagatgcagaccattccttttca
aatccttctgtaccagaatcaaatctaaggactagaaatgccagtaagaggttacataag
cgagattctatagaaaatagcatgggggaatcctcaaaaatagggacatcagacatttct
ttgctttctgaaaaaactcttcagacagtagaatgccagcacaagagaagtaggagggtg
aggcgatctaaaggttgtgattgttgtggagaaaaatcacagtctcaggaaaagtcattt
actgggttaaaggatacagaaaattacgatgtaaaagtcagtgaaacaaaaaagacagat
ggggaaacacctgtatctatttcagaaacttcgaaagctgatctgtcctcggaggttaaa
cttttagatgagcatcatagtgtgaattttcatttggatctcaaggaagagaatgatact
actaatgattcattaattatatctgaaactgagttaaaagaaaatactactcaaagcttt
cttccttctgaaatggtaaaatttaaagaaacttctcgtagggattctgaggaagcaata
tctctagaaacccaggagccatctaataagaaatgtaaaactgttgacccacatttagat
gtttccaaagatatttcactgaaatgtttttctttggagaccaaagaagaaaagtcagag
gccacttcaaaagagaaattgagtacagagaacattgttattgttgaatcaaatgcagaa
tcaaatccagaagtagatgctatggaattgaatgtagaaaatgatcagtctgaagctggc
ttctctgaacaaaagaatgtcaaaactggtattccagggaaagaagtaacagaggaaaac
agtgaaagaatggatacacctgaaaaactgaaagccaatgaagcagtaactgaggaattt
aattcagctactgattattcggatactccgacatctgtaaaagtgaatgctcaggtagag
atctctgaacaaacagcggttggggagctaggtggaggaagtgatgaatctgatccaggc
tcatctgaagaaatgaacgctgaaatgaaaaattgtgaaaaaacagcggtttgtgaggtg
actactgaatctgaccacgtcactgaaaccgaagacgaagatgtaactaccacggcttct
ctgcctatagaagttgaaacaaaggaattagatgtagaagtcaataactttgttcccgac
acacttgagatgatcactgaagaaggaaaggttgaccctaacaaaactgaaacgaatact
gaacctaataaattggaggaaacacagttagatgacaatcagatggtagtggaaagtaat
gaaactttaccggaagttcaccatacttcagagaaagtagaggagatagcacaacctctg
acatctgaaacagatatttctggactaatatcagaagacagtaatacatctcctcaaaaa
tcgaaggatattgatcctttactcatgtcagcaaacgagagtcctagtggcatgcacaca
cgttgtgtgtggtctcctttggcttctccatccaccagcattttaaagagaggactaaaa
agaccccaagaagatgaaatctcgtcacctgtccacaaggttcgccgtgtctcctttgca
gatcctatataccaagcaggattggcagatgacattgataggcgatgctctattgttagg
tgccattcttcaaatagttctctcatggtaaaaagtgttaaaacttcacctactgtgcaa
tctaagcataataccacttcagccaaaggatttctgtccccaggatcacgtagctctaaa
tttaagagctcaaagaagtgtttaattgcagaaatggctaaggaatctgtgccatgccca
acagaaagtgtttaccctgctttggtgaactgtgtagcaccagttgaaatcattttacct
cagattacatccaacatgtgggcaagaggactgggacagctcattagagccaagaatata
aaaacaattggcgatttgagtacccttacagcatctgaaataaaaactcttcctatccgt
tctccaaaagtgtctaacgttaaaaaggctctcagaatatatcatgagcagcaggtgaag
tctcgtggactagaagagattccagtttttgatatttctgaaaaaacaataaatggaatg
gaaaataaatctatctctcctgatgaagaaagacttgcctcagatttaattgatcctgtt
gctttagaagctccgttatctaaaaatcttgtggcacagattagcgcacttgctcttcaa
ctagattcagaagatctctataattattcaggaagccagctatttgaaatgcacgagaaa
cttggtagcatggcaaactctataattaaaaatctgcagtcacgttggaggtcaccagcc
catgaaaattctttttag
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