KEGG   Bos indicus (zebu cattle): 109567980
Entry
109567980         CDS       T04792                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04820  Cytoskeleton in muscle cells
biu05169  Epstein-Barr virus infection
biu05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:biu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109567980 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    109567980 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    109567980 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:biu03019]
    109567980 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:biu04812]
    109567980 (VIM)
   04147 Exosome [BR:biu04147]
    109567980 (VIM)
Messenger RNA biogenesis [BR:biu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     109567980 (VIM)
Cytoskeleton proteins [BR:biu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     109567980 (VIM)
Exosome [BR:biu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109567980 (VIM)
  Exosomal proteins of other cancer cells
   109567980 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri DUF7491 TPR_MLP1_2 Sec10_N RBD-FIP GeBP-like_DBD DUF4515 GAS
Other DBs
NCBI-GeneID: 109567980
NCBI-ProteinID: XP_019828669
UniProt: A0A6P5CTZ9
LinkDB
Position
13:31476090..31484081
AA seq 466 aa
MSTRSVSSSSYRRMFGGPGTASRPSSTRSYVTTSTRTYSLGSALRPTTSRTLYTSSPGGV
YATRSSAVRLRSGVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQTLTCEVDALKGTNESLERQMREMEENFSVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacc
gcaagtcggccgagctccacccggagctacgtgaccacatccacccgcacctacagcctg
ggnagcgcgctgcgccccaccaccagccgcaccctctacacctcgtccccgggtggcgtg
tacgccacgcgctcctcggccgtgcgcctgcggagcggcgtgcccggcgtgcggctgctg
caggactcggtggacttctcgttggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctcaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggctgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcag
gtggaccagctcaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctggccgaa
gacatcatgaggctccgggagaagttgcaggaggagatgcttcagagagaggaagccgag
agcactctgcagtctttcagacaggatgttgacaatgcctctttggcacgtcttgacctg
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactgcatgatgag
gaaatccaggagcttcaggcccagattcaagaacagcatgtccaaatcgatatggatgtt
tccaagcccgacctcacggctgccctgcgtgatgtccgtcagcagtatgagagcgtggcc
gccaagaaccttcaggaggctgaggaatggtacaagtccaagtttgctgacctctctgaa
gctgctaaccgcaacaatgatgccctgcgccaggccaagcaggagtcaaatgagtaccgc
cggcaggtgcagactcttacctgcgaggtggatgcgctcaaagggactaacgagtctctg
gaacgccagatgcgtgaaatggaagagaacttctctgtggaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaacatgaaggaagagatggctcgtcacctg
cgcgaataccaagacctgctgaatgtcaagatggcgctcgacatcgagatcgccacctac
aggaagctgctggaaggagaggagagcaggatttctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattcactccctctggttgacactcactcaaaaagg
acacttctgattaagacggtggaaaccagagatggacaggttatcaacgaaacttcccag
catcacgatgatctggaataa

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