Bos indicus (zebu cattle): 109567980
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Entry
109567980 CDS
T04792
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04820
Cytoskeleton in muscle cells
biu05169
Epstein-Barr virus infection
biu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109567980 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
109567980 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
109567980 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109567980 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
biu04812
]
109567980 (VIM)
04147 Exosome [BR:
biu04147
]
109567980 (VIM)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
109567980 (VIM)
Cytoskeleton proteins [BR:
biu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
109567980 (VIM)
Exosome [BR:
biu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109567980 (VIM)
Exosomal proteins of other cancer cells
109567980 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
TPR_MLP1_2
Sec10_N
RBD-FIP
GeBP-like_DBD
DUF4515
GAS
Motif
Other DBs
NCBI-GeneID:
109567980
NCBI-ProteinID:
XP_019828669
UniProt:
A0A6P5CTZ9
LinkDB
All DBs
Position
13:31476090..31484081
Genome browser
AA seq
466 aa
AA seq
DB search
MSTRSVSSSSYRRMFGGPGTASRPSSTRSYVTTSTRTYSLGSALRPTTSRTLYTSSPGGV
YATRSSAVRLRSGVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQTLTCEVDALKGTNESLERQMREMEENFSVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacc
gcaagtcggccgagctccacccggagctacgtgaccacatccacccgcacctacagcctg
ggnagcgcgctgcgccccaccaccagccgcaccctctacacctcgtccccgggtggcgtg
tacgccacgcgctcctcggccgtgcgcctgcggagcggcgtgcccggcgtgcggctgctg
caggactcggtggacttctcgttggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctcaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggctgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcag
gtggaccagctcaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctggccgaa
gacatcatgaggctccgggagaagttgcaggaggagatgcttcagagagaggaagccgag
agcactctgcagtctttcagacaggatgttgacaatgcctctttggcacgtcttgacctg
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactgcatgatgag
gaaatccaggagcttcaggcccagattcaagaacagcatgtccaaatcgatatggatgtt
tccaagcccgacctcacggctgccctgcgtgatgtccgtcagcagtatgagagcgtggcc
gccaagaaccttcaggaggctgaggaatggtacaagtccaagtttgctgacctctctgaa
gctgctaaccgcaacaatgatgccctgcgccaggccaagcaggagtcaaatgagtaccgc
cggcaggtgcagactcttacctgcgaggtggatgcgctcaaagggactaacgagtctctg
gaacgccagatgcgtgaaatggaagagaacttctctgtggaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaacatgaaggaagagatggctcgtcacctg
cgcgaataccaagacctgctgaatgtcaagatggcgctcgacatcgagatcgccacctac
aggaagctgctggaaggagaggagagcaggatttctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattcactccctctggttgacactcactcaaaaagg
acacttctgattaagacggtggaaaccagagatggacaggttatcaacgaaacttcccag
catcacgatgatctggaataa
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