Bos indicus (zebu cattle): 109568220
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Entry
109568220 CDS
T04792
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109568220 (CHD7)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109568220 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
109568220
NCBI-ProteinID:
XP_019828994
UniProt:
A0A6P5CUX5
LinkDB
All DBs
Position
14:26263821..26392432
Genome browser
AA seq
2940 aa
AA seq
DB search
MADPGMMSLFGEDGNIFNEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQSKLTHFDHYNQYEPQKMHLMDQPNRMLSNAPGNGLASPHSQYHTPPVPQVPHGGGKG
EAPQPQPAPSGPPGQGHPPHLQQLGGYLARGDFSMPQHGQPQPRMGQFPPGQEGLSQGNP
FIAGPGPGHLSHGPPQSPGVAPSLRHAVQPFHHHPPTALHGDSVAHSPRFSPNPAPQGAV
RPQTLTFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNSTGMNQNLGLTNSAPLNQSVP
RYPSAVGFPPGSAPGLLHQQPVHPSGSLNQMNAQTMHPSQPQGSYASPPPMSPLKAMSSS
AAGTPPPQVRPGSAPMDVGGYPSMPHPQPAHQPPGGALGLGPRSLGPRSLPPARPFLGMS
PAPHLRPNGCPGVTLADPQAVQDRQLPGQQHPGPQPAFQQLPSCPPLQPHPGLHHQSSPP
HPHHQPWAQLHPSPQSTPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSI
EQQPQQKKKKKKNNHIVAEDPSKNFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRPKAK
KDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKVKTATPKPKSSKKSSNKKPDAEASAL
KKKVNKGKTEGSENSDLDKTPPPSPPPEDDEDPGVQKRRSSRQVKRKRYTEDLEFKISDE
EADDADAAGRDSPSTTSQSEPQESVDADGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKY
KNFSYLHCQWASIEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDF
ARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPA
DDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEI
YLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRV
IKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKV
LLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRK
CCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVL
IFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASL
KLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQI
LLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNN
LVIDTPRVRKQTRLYSAVKEDELMEFSDLESDSEEKPCTKPRRPPDRSQGYARSECFRVE
KNLLVYGWGRWTDILSHGRYKRPLSEQDVETICRTILVYCLNHYRGDENIKSFIWDLITP
TADGQTRALVNHSGLSAPVPRGRKGKKVKAQSSHPVVQDADWLAGCNPDALFQEDSYKKH
LKHHCNKVLLRVRMLYYLRQEVIGDQAEKILEGADSSEADVWIPEPFHAEVPTDWWDKEA
DKSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDR
EDEDPEYKPTRTPFKDEIDEFANSPPEDKEEPMEIRAPGKHSEGSTELGQLYWPSTSTLT
TRLRRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRRE
EADFYRVVSTFGVIFDPAKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPA
KPDDEPPDLSSAIEPITEERASRTLYRIELLRRIREQVLHHPQLAERLKLCQPSLDLPEW
WECGRHDRDLLVGAAKHGVSRTDYHILNDPELSFLDAHKNFAQARGAGGAPALNPXXXXX
XXXXXXXXAAPGQEDKAGAAEAKAREASEKPEGKEEEEAEGSGKDQRQDREAELGAGKSE
PRGVEVGVDSGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMS
TARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRR
QMFDFQGLIPGYTPPTADSPLQKRSLAELSAVGQASISGSEELTASPQLSKDDALNLSVP
RQRRRRRRKIEIEAERAAKRRNLMEMVAQLRGSQVVSENGQEKVVDLSKASREAASSTSN
FSSLTSKLILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRK
NVEGLDLLFMSHKRTSLSTEDAEVTKAFEEDIETPPTRNIPSPGHLDPDTRIPVINLEDG
TRLVGEEAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLD
INTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPE
SMFDRLLTGPVVRGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTS
LQNLQSLQSLQLAGLMGFPPGLATAAAXXXXXXXXXXXXXXXQPGVAGLPSMFGLGGLLN
APLSAAAGSPAATAGPTDPEDGASRAEEKGGEHEDESKDPEKSTEAAPGPDSANGSVGAA
TGPAGLPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQGAVGAGEDK
APDKAEGAAFQEDEPLEGSDAEESLDKTAESSVLEDEIAQGEELDSLDGGDEIENNENDE
NT seq
8823 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggacgggaatattttcaatgagggc
ctcgaaggcctgggcgaatgtggttaccctgaaaaccccgtgaaccctatgggtcagcag
atgcctatagaccaaggcttcgcctccctgcagccttccctccaccatccctccaccaac
cagaatcaaagcaagctgacccacttcgatcactataaccagtacgagccgcagaagatg
cacctgatggaccagcccaacagaatgctgagcaatgcccccgggaacggactggcgtct
cctcactcgcagtaccacacccctcctgtcccccaggtccctcatggaggcggcaagggc
gaagctccgcagccccagccggccccatcgggaccccccgggcagggccaccccccacac
ctgcagcagctaggcggttacctggcccggggggacttctccatgccgcagcatggccag
ccacagccgaggatgggccagtttcccccgggccaagagggcctgagtcagggaaaccct
ttcatcgctggccccgggccgggccacctgtcgcacggccccccacagagccccggggtg
gccccgagcctgcgccacgcggtgcagcccttccaccaccaccctcccaccgctctccac
ggggactcggtggcccacagcccccggttctcccccaaccccgctccacaaggggccgtg
aggccgcagaccctcacctttagttctcggagccagacagtcccctcacccactataaac
aactcagggcagtactcccgctatccttacagcaacctaaatcagggattagttaacagt
acagggatgaaccagaacctaggccttaccaatagcgctcccctgaaccagtccgtcccg
aggtaccccagcgcggtgggattcccgcccggcagcgccccaggactcctgcaccagcag
cccgtccaccccagcggctcactgaaccaaatgaacgcgcaaactatgcacccttcgcag
cctcagggatcgtacgcctccccgcctcccatgtcacccctgaaagcgatgagcagcagc
gcggcgggtacgcctcccccgcaggtgcggcctggcagcgcccccatggacgtgggcggc
tacccgagcatgccgcacccgcagccggctcaccagccgcccggcggcgccctggggctc
ggaccgaggagcttgggcccgcggagcctgccgccggcgcgcccattcctggggatgtcc
ccggcccctcacctgaggcccaacggctgccccggtgtgactctcgccgacccgcaggcc
gtccaggaccgccagctccccggccagcagcaccccgggccgcagccggccttccagcag
ctgcccagctgccctccgctgcagccccacccgggcctgcaccaccagtcttcacccccg
cayccgcaccaccagccttgggcgcagctccacccctcgccccagagcaccccgcagaaa
gtgcctgtgcctcagcattctccatcggagccctttctagagaaaccagtgccggatatg
actcaggttagtggaccgaacgctcagctagtgaagagtgatgattacctgccgtcgata
gaacagcagccacagcaaaagaagaagaaaaagaagaacaaccacattgttgcagaggat
cccagtaaaaactttggtaaagatgacttccctggtggggttgataaccaagaactaaac
aggaactcactagacgggtcccaagaagagaaaaagaaaaagaaaaggccgaaggcaaaa
aaagatcccaaggaaccgaaagaacccaaggagaaaaaagagcccaaggaacccaagacc
ccgaaagcccctaagattcccaaagagccaaaggaaaagaaagtaaaaactgccacgcca
aaacccaaatccagcaaaaagtcaagtaacaagaaacctgatgcagaagcaagtgctttg
aagaaaaaggtcaacaagggaaaaacagaaggttctgaaaattcagacttggacaaaacg
cccccaccatcccctcctcccgaagacgatgaagacccaggtgttcagaaacgacggtcc
agcaggcaagtgaagagaaagcgatacaccgaggacttggagttcaagatctctgatgag
gaggccgatgacgcagatgctgctgggagagactccccctccaccacctcacagtcagag
ccacaggaatctgttgatgcagatggtccagtggtagaaaaaattatgagcagtcgttca
gtaaaaaaacagaaggaatccggagaggaggtagaagttgaggagttctacgtgaaatat
aaaaacttctcttatcttcattgtcaatgggcgtccatagaagatctggaaaaagataag
agaattcagcaaaagattaagcgatttaaggcaaagcaaggccagaacaaattcctgtca
gagattgaagatgagctttttaatccagattatgtggaggttgaccggataatggacttt
gcacgtagcacagatgaccggggagagcctgtgactcactatctggtgaagtggtgctca
ctgccttatgaagacagcacgtgggagctgaggcaggacatagaccaagccaagatcgaa
gagtttgaaaagctcatgtcccgggagccagagacagagcgtgtggagcgaccccctgct
gatgactggaagaaatcggagagttccagggagtataaaaacaataacaaactcagggaa
taccagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatt
ttagcagatgaaatgggtttgggaaaaactatccagtccattacatttctctatgagata
tatttgaaaggaatccatggcccttttttagtaattgccccattgtccacaatccccaac
tgggaaagggaattccggacctggacagaattgaacgtggttgtgtaccatgggagtcaa
gctagycgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtg
ataaaggggtcatataagttccacgccatcatcactacatttgagatgattctgaccgat
tgtcctgagctgcggaatattccctggcgatgtgtagtcatcgatgaagcccacaggctg
aagaacaggaactgcaagctcttggagggactcaagatgatggacttggaacacaaagtg
ctgctgacggggaccccgctccagaacacggtggaagagctcttcagcttgcttcacttc
ttagaacccactcgctttccttcggaaaccacctttatgcaagaatttggtgatctgaaa
actgaagagcaggtgcaaaaactccaggctattctaaagccaatgatgttgagacgtctc
aaggaggacgtggaaaagaacttggcccccaaagaagaaactatcattgaagtggagcta
acaaacattcagaagaaatattaccgagccatccttgagaagaatttcgcgtttctttcc
aaaggtggtgggcaagctaaygtgcccaaccttttaaacactatgatggaattacggaag
tgctgcaaccacccctaccttatcaacggtgctgaagagaaaattttggaagagtttaaa
gaaacacacaatgccgactctccagattttcagctccaggcgatgatccaggctgctggc
aagctagtgctgattgacaagctgctgccgaagctgaaggccggtggccatagggtgctc
attttctcccaratggtgcgctgcctggacatcctggaagactacctcattcagagacgg
tacccgtatgagaggatcgacggccgggtcagaggcaacctccgtcaggcagctatcgac
aggttytccaagcctgactctgataggtttgtgttcctcctgtgtacgagggcaggaggc
ctaggcattaatctcactgctgctgatacctgcatcatcttcgattctgactggaatccc
caaaatgatctccaggctcaggctagatgtcacagaataggacaaagcaaatctgtgaag
atatacaggctgattaccaggaattcttatgaaagggaaatgtttgacaaggccagcctg
aagctgggtctggacaaggcagtcctgcagtccatgagcggacgggagaatgctcccaac
ggggtacaacagctttccaagaaagaaatagaggatcttctccggaagggggcctacggt
gcactcatggatgaggaggacgagggctccaagttctgcgaagaagacatcgatcagatc
ctgctccggcggacccacaccatcaccatcgagtccgagggcaaaggctccacgtttgct
aaggccagctttgttgcatctggaaataggacagatatttccttggatgatccaaatttc
tggcaaaagtgggcgaagaaggcagaattggatatcgatgccttaaacggaaggaacaac
ctggttattgacactccaagagtgaggaagcaaaccaggctgtacagcgcggtgaaggag
gacgagctgatggaattttcagacctggagagcgactcagaggagaagccctgcacaaag
ccgcggcggccaccagacaggtcccagggctatgccaggagcgartgcttccgagttgag
aagaacctgctcgtctatggctgggggaggtggacggacatcctctcccatggtcgctac
aagcgcccactcagcgagcaggacgtggagaccatctgcaggaccatccttgtgtactgc
ctcaaccactaccggggggacgagaacatcaagagcttcatctgggatctcatcacaccc
acggctgatggccagacgcgggccctggtcaaccattccggtttgtcagccccggtgccc
agggggaggaagggcaagaaggtgaaagcccagagctcacacccagtggtgcaggatgcc
gactggctggctggctgcaacccggacgccttgttccaggaggacagttacaagaagcac
ctgaagcaccattgcaacaaggtcctgctgcgtgtccgcatgctctactacctgagacaa
gaagtgataggagaccaggcagagaagatcctggagggcgccgactccagtgaagctgac
gtgtggatacctgaacctttccacgcggaagtccccacagactggtgggataaggaagca
gacaagtccctcctcattggcgtgttcaagcacgggtacgagaagtacaactccatgcga
gctgaccccgcgctgtgcttcctggaacgagttggtatgcccgatgccaaggccatcgct
gccgagcagagaggaacagacatgctagcagatggcggtgacgggggagaatttgataga
gaagatgaagacccagaatataaaccaaccagaacgccgttcaaggatgaaatagatgaa
tttgcaaattctcctccagaagataaggaagagcccatggaaatacgcgccccaggcaag
cacagcgagggcagcactgagctaggccagctgtactggcccagcacctccacgctgacc
acccggctacgcaggctcatcactgcctaccagcgcagctacaagcggcagcagatgcgg
caggaggcgctgatgaagacagaccggcggaggcggcggcctcgcgaggaagtgcgggcc
ctggaagccgaaagggaggccatcatatcggagaagcggcagaagtggacgaggcgggag
gaggcggacttttatcgagtggtgtccacattcggggtcatttttgaccctgcgaagcag
cagttcgactggaaccagttccgagcctttgccaggcttgacaagaagtccgacgagagt
ctggagaagtacttcagctgctttgtggccatgtgccggcgggtgtgtcgcatgcccgcc
aagccggatgacgagccaccggacctgtcgtcggccatcgagcccatcacggaggagcgc
gcctcccgcacactgtaccgcatcgagctgctgcgcaggatccgcgagcaggtgctgcac
cacccacagttggctgagcggctcaagctctgccaacccagcctggacctgcccgagtgg
tgggagtgcggccggcatgaccgggacctgctggtgggcgccgccaagcayggcgtcagc
cgcaccgactaccacatcctcaacgaccccgagctctccttcctggacgcgcacaagaac
ttcgcccaggcccggggggcgggcggcgcccctgccctgaaccctcnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnagctgccccrggtcaggaggacaaggccggggcagcc
gaggccaaggccagggaggcctccgagaagcccgaggggaaggaggaagaggaggccgag
ggcagcgggaaggaccagaggcaggaccgcgaggcggagctgggggctgggaagagcgag
cccagaggggtggaggtcggtgtggactccgggcccaagtccatttctgagaagggttct
gaggaggacgaagaggaaaagctggaagatgatgacaagtcagaagagtcttcccagcct
gaagcaggggctgtctctagagggaagaattttgatgaagagagcaatgcttccatgagc
actgctagggatgagacccgggatggattctacatggaggatggtgacccatctgtagct
cagctccttcatgaaaggacgtttgccttctcattttggcctaaggaccgagtaatgata
aaccgattagacaacatctgtgaagcagtattgaaaggcaaatggccggtaaataggcgc
cagatgtttgatttccaaggcctcatccccggctacacgccccccaccgccgacagtccc
ctgcagaagaggagcctggccgagctgtctgccgtgggccaggccagcatcagcgggagc
gaggaactcacygcctcccctcagctgtccaaggatgatgcccttaacctctccgtgcct
cgccagcggaggaggaggaggaggaagatcgaaatcgaggcggagagagctgccaagcgg
cgaaacctcatggagatggtggcgcagctgcgggggtctcaggtggtctcagagaatgga
caagagaaagtggtcgatttatcaaaggcctcgagagaggcagcaagctctacctcaaac
ttttcatctctcacttcaaagttgatcttgcccaacgtctccacgccggtgtctgatgcc
tttaagactcagatggaactgctccaggccggcctgtcccgcacgcccaccagacatctg
ctcaatggctccctcgtggacggagagccccccatgaagcggaggcggggaaggaggaaa
aacgtggagggccttgacctgctgtttatgagccacaaacggacatcactgagtacagag
gatgctgaagtgaccaaagcttttgaagaggatatagagaccccacctacaagaaacatt
ccttctcctggacacctggacccagacacacggatccctgttataaatctcgaagatggg
acgaggctggtgggggaggaggcgcctaaaaataaggatttagttgaatggctgaagctg
catcccacttatactgttgatatgccaagttatgtaccaaagaacgcagatgtgctgttt
tcctcatttcagaaaccgaaacagaaacgacacagatgtcgaaaccctaataaattggat
ataaacactttgacaggagaagaaagggtgcctgtcgtgaacaaacgaaatgggaagaag
atgggtggagctatggcgcctccgatgaaggatctgccccggtggctggaagaaaacccc
gagtttgcagtggccccagactggacggacatagtcaagcagtctggcttcgttcccgag
tcmatgtttgaccggcttctcactggacctgtggtgcggggagaaggggcgagccggcgc
ggaaggaggcccaagagcgaaatcgcccgggctgccgcggcagccgcagcagtggcctcc
acgtcggggatcaacccgctgctggtgaacagcctgttcgcagggatggacctgacaagc
ctgcagaacctccaaagcctccagtcgctccagctggcgggcctcatgggcttccctccg
ggactggccacggccgcggcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnncagccgggcgtggccgggctgcccagcatgttcgggctcggggggctgctcaat
gccccgctgtccgctgccgccgggagccccgcggccacggccggtcccacggatcctgag
gacggtgcatccagggcggaggagaagggtggcgagcacgaggacgagagcaaggacccg
gagaaaagcacagaagccgccccgggcccagactccgckaacggatcagtgggtgctgct
accggcccggccggcctgccctccaacccgctggccttcaaccccttcctgctgtccacc
atggcccccggcctcttctacccgtccatgtttctacctccaggactggggggattgacg
ctgcccggcttccccgcgcttgcggggctccagggcgccgtgggtgccggcgaagacaag
gcccccgacaaagccgagggggccgcgtttcaggaagacgagcccctcgagggcagcgac
gccgaggagagcctggacaagacggccgagtcctccgttctggaagacgagatcgcccag
ggcgaagagctggactccctcgacggcggggacgaaatagaaaacaatgaaaatgacgaa
taa
DBGET
integrated database retrieval system
