Bos indicus (zebu cattle): 109568646
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Entry
109568646 CDS
T04792
Symbol
RP1
Name
(RefSeq) LOW QUALITY PROTEIN: oxygen-regulated protein 1
KO
K19538
retinitis pigmentosa 1
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
biu03037
]
109568646 (RP1)
04812 Cytoskeleton proteins [BR:
biu04812
]
109568646 (RP1)
Cilium and associated proteins [BR:
biu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109568646 (RP1)
Cytoskeleton proteins [BR:
biu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
109568646 (RP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
FGF
Myb_Rap1
Motif
Other DBs
NCBI-GeneID:
109568646
NCBI-ProteinID:
XP_019829622
UniProt:
A0A6P5CXP5
LinkDB
All DBs
Position
14:22206694..22268481
Genome browser
AA seq
2125 aa
AA seq
DB search
MSETPSTSFSMVRRISSEGQLPSPRQXGITQPVVAKRISFYKSGDPQFGGVRVVLNPRSF
KTFDALLDNLSGKVPLPFGVRNISTPRGRHSITRLEELEDGQSYLCSHGRKVQPVDLDKA
RRRPRPWLSSRALSTHVQRGPAPAAPGMLRAPRRLVVFRNGDPKTRRAIVLNRRVTQSFE
VFLQYLTQXMQRPVTKLYATDGRKVPSLQAVILSSGAVVAAGREPFKPGNYDIQKYLLPA
RLPGISRRVYPKGNARSESRKMSTHVSSSPTSQIYSLSSEKMQNNDCYSDHSFASENYLA
LEKNDSQNLLIYPSEDDVEKSIIFNQDGTMTVEMKIRFKIKEEETIKWTTTLCRADLSNN
GEKSEINSLPGRTDDRSSGVKITACSLSADVSPLEKGGSQVDSLAEEANTQVKDQDVETG
SSTSWENPALDTDATQGTQDRVKHRFYRPPTPGPRRVRQKKSVIGSVTLVSETEVQEKMI
GQFSYNEERKDWENKSEYHMVTHSCSKMSSVSNRPILVQVDNDEQVASSLERKKZSRLLK
SSAVSAGVVEITSQKTLEMSHNGGLPQTTSEKSIVEEGIVDNVIADNKARVRNLRTYGNT
DDRSSPFLGDAAHSSSNNPGTDKTISKTPASVGNSTVTTRIDQLIHEFSHCGLTKLPENE
KQISSSVASKKKMKSQQHVINSQHQAGEMATKRIPRKNKRMNTRGRIAQETILRDSHSSL
KGAILCEKDLHASDTVIESNYFSSKGNNPVNSRNFPRNKLNTIHKPKIQGLLARRKSRPL
NKVNLGGPTKREIGQGEKVFSHHEIGYCKNTFENQNLFHLFNFLEQKPNAFCGPESQAET
ASWYLRGTSKRSLVSKVNNSHITLRSQKKQKRDKLKSDTTVSKQHVTTRANSLASLEKAV
FPENVTHHSVQSYVQRWLQNLSPQAALQLGKSAPVYKKERGVASYNNGFLPGNSSHTSSG
KRNDSILQSNRHTTKSASLTGDNLGKRVGMXFDKNSSEELIQDHCESQTDSLNDTYLLSV
HEFCTLSQSATDDPNAKSQVSAAKSGQEMSLVYKDINLAAKGPXVETAVQVDLEGDTPQH
LSXVQLLHQLQALVPSSPKVQNGVVQMPGPLSEVPFPSLIRNSSTNVLLAWLLVLTLKGG
VSSFCPGDALKXTSGSSETLALLEVLKHIAVTEEADDLKAAVASLVESTTNHSGLTEKEQ
DVGPIGLSANCSTPNIQIIPQCAENEKTQKISLDGSHTASEEVSEVCVTAVTRSPRKMGT
VVKTYPPEETXHLSEDSFPSDDCTMDQTSMNKACFLGDIXSLTEAVSSHEGCAYEQNHIY
ERADNLELTKELERVDEVQKDRNILADPECKHGSNMLVSHQSISNLSHCGSFQNTTESEL
DGEHSFLGKSESCSLKKFQDKSVYTSFDKEDSKTSEEPGSTTNSMTSSERNVSEMESFEE
LENQNTDIFNIKVNSGEQVTEELIRKELEAGKSLELIEVSSRNGAEEGKDGVICEIISRK
LVTPPSLVFCYDSKQNMEKEPSEGETETKVRKMVESLEAGSSAESPLNFKSGLRRSGTSD
WSDYRQNIENEPSYKASSNGPSDSDEEMTPEKECNKGFVKXTIEKLYGKAEMMRPSFFAG
STHTSQVYPCDSVEFQGTGKVGLYDPEGQSLGSLERVSSNSTVLQKFPEQKRDKCDVXNV
RASYPREDIAEHGTKQNDHKRILRDREEGVLIDKGKWLLKENHLLRVSSPECSGPCGHAD
TTSVDTLLDNSSTEVPYSHFGNLAPGPNMAELSSSELEELTQPPELRCNYFNVPHCSDSE
PFHDDELDTQDEACXQEREPNHPAEEKGNLRSERVCTSATHVFASAGNKVHPVSDGAVRN
QPLAGSNVIHGALQEGDSLDKLYNICGQHCPILTVINQPVNEEHRGFAYCKDSDVENSLS
LQLWMKIHPCLRHSSKTMFRDKNNKTRSRRALTDNAVGNIHDWPHFNNTFDLMDRRRKLK
QSNCLGLEEENNFNKFQSYLKNFLHTLLLVVGQVNSNPQDPSSQTKEIFEVVDENNNLLN
SRFQNSGTNLNQVVREHSYHLSFEMLGQAXLFCQVETFLGISNRNILEMFYIFEDENLFI
WEEENXLHWTDLESRDEQADFRFQY
NT seq
6378 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaactccttccaccagtttctccatggttcgccggatctcctctgaaggtcag
cttccttctcctcgccagtygggcatcacccagcctgtcgtggccaaaaggatcagtttc
tacaagagcggagaccctcagttcggcggggtccgggtggtgctgaaccctcgttccttc
aaaacattcgatgctctgctggacaacctgtcgggcaaggtccccctrccctttggggtg
cggaacatcagcaccccccgggggaggcacagcatcacgcgcctggaggagctggaggac
ggtcagtcgtacctgtgctcccacggcaggaaggtgcagccagtggatctggacaaggcc
cggcgtcgcccgcggccctggctcagcagccgagctctcagcacccatgtgcagcgaggc
cccgcccctgctgctcctggcatgctgcgcgcgccgcgacggctcgtggtcttcaggaat
ggcgaccccaaaacgaggcgtgcaatcgtgctcaacaggagggtcacgcagagctttgag
gtcttcctgcagtacctgacacagrtcatgcagcgcccggtaaccaagctgtaygccaca
gacggaaggaaggttcccagtctgcaggctgtgatcctgagctctggagctgtggtggca
gcaggaagggaaccgtttaaaccaggaaattatgacatccaaaagtacttgcttcctgct
agattaccaggcatctctcgtcgtgtgtaccccaagggaaatgctaggtcagaaagcaga
aaaatgagcacacatgtatcttcaagcccaacgtctcagatttattctctttcttctgag
aaaatgcagaataatgattgctactcagatcattcttttgcttctgaaaattacttggca
ttagaaaaaaatgattctcagaatttattgatatatccttctgaagatgatgttgagaaa
tcaattatttttaatcaggatggtactatgacagttgagatgaaaattcgattcaagata
aaagaggaggaaaccataaaatggacaaccactctctgtagagctgatctgtccaataat
ggtgaaaaaagtgaaataaacagtctcccagggagaacggatgatcgatcatctggtgta
aagattactgcgtgttcattgtccgcagacgtctcacctctggagaaaggtggtagtcag
gtggacagtctagcggaggaggcgaacactcaagtgaaagatcaagatgttgaaactggt
agttctaccagctgggagaaccctgctctggacacagatgccacccagggaactcaggat
cgagtgaagcatcgtttctacaggccccctacacctggaccaaggagagtgaggcagaag
aagtctgtgatagggagtgtgaccttagtatctgaaactgaggttcaagagaaaatgatt
gggcagttttcctacaatgaagaaaggaaagattgggaaaacaagtctgagtatcacatg
gtcacacattcttgcagtaaaatgtcatctgtgtccaacagacccatacttgttcaagtt
gataacgatgagcaggtagcgtcatctttagaaagaaaaaagsaaagcagattgctcaaa
tcaagtgcagtaagtgctggtgttgtagaaattacaagtcagaagacgttagagatgtcc
cataatggtggcttgccrcagactacatcagaaaagtcaattgtggaggaaggtatagtt
gataatgtcatagcagacaacaaagctagggtcaggaatttaagaacttacggtaacacc
gatgatagatccagccctttcttaggagatgcagctcactcttcaagtaacaaccctgga
actgacaaaactatttccaagaccccagcttcagtaggaaactctactgtcactacaaga
atcgaccaactgattcatgaattttctcattgtggtttaacaaaacttccagaaaatgaa
aagcagatttcatcctctgttgctagcaaaaaaaagatgaaatctcagcagcatgtgata
aattctcagcatcaggctggagagatggcaactaaaagaatccctaggaagaataagaga
atgaacacaagaggtagaattgcacaggaaaccatattgcgagattcacatagttccctc
aaaggggccatactttgtgagaaagacctccatgcaagtgatacggtaattgaatcaaat
tatttttcttcgaaaggtaataatcctgtgaattccagaaatttccctagaaataaatta
aatactattcataaacctaagattcaaggacttttagccagaagaaaatccagaccacta
aacaaagtaaacttggggggacctacaaaaagagaaattggtcaaggagagaaagtgttt
tcccatcatgagattggatattgcaaaaatacttttgaaaatcaaaatttatttcatttg
tttaacttccttgagcaaaaacccaatgctttttgtgggccagagtctcaggcagaaaca
gcctcttggtatttgagaggaacgtcaaagaggagtttagtttcaaaagttaataattca
cacataactttaaggagccagaaaaaacaaaaaagggataagttgaaatcagatactact
gtaagtaagcagcatgtcacaactagggcaaattccttggcttctttggaaaaagctgtt
tttcctgagaatgttacccatcattcagttcaaagttatgtacaaagatggttgcagaac
ttaagtccacaagcagctttgcagcttggcaagtcagctccagtatacaaaaaggaaagg
ggtgtggcgagttataataayggttttcttccaggaaacagttcccacactagttctgga
aaaagaaatgattctattctgcaaagtaatagacacacaactaaaagtgccagtttgaca
ggagacaatctaggtaagagagtaggtatgycttttgacaaaaatagcagtgaagaactc
atccaagatcactgtgagagccagactgactctctgaacgatacttacttgctttctgtt
catgaattctgtactttgtcgcagtcagctacggatgatcctaatgctaaaagtcaggta
tctgctgcaaagtcagggcaagagatgagccttgtttacaaagacataaaccttgctgca
aaagggccaagsgtagagactgccgtacaagtagatctggaaggggacaccccacagcac
ttgtcacyagttcagctgcttcaccagctgcaagctttggttcctagtagtcccaaggtt
caaaatggagttgttcagatgccaggtccactttcagaagttcccttcccttctttgata
cgtaattcctccactaatgtacttctagcttggctcttggtgctaaccctaaagggaggt
gtgagtagcttctgtccaggtgacgctctcaagrcgaccagtggaagttcagaaacactt
gcattgttggaggtgctgaagcacattgccgtcacagaggaagctgatgacttgaaggct
gctgtggccagcttagtggaatcaaccacgaatcactctggactcactgagaaagaacag
gatgtgggtccaataggtctttctgcaaattgctctacacccaacattcagataattcct
cagtgcgctgaaaatgaaaaaacacagaaaatctctttagatggaagccatactgccagt
gaggaagtctctgaagtctgtgttacagcagtgactcgatctccacgtaaaatgggcacg
gtagttaagacttaccctccagaagagacttrtcacctcagtgaagattctttccccagt
gacgactgtaccatggatcagacttccatgaacaaggcttgtttcttaggagacatctyt
tcacttactgaggctgtgtcttctcatgagggttgcgcttatgaacaaaaccatatctat
gagagagctgataatttggaattgactaaagagttagaaagagttgatgaagttcagaaa
gacagaaatattttggcagaccctgagtgtaaacacggctctaatatgttggtatcacac
caaagtatcagtaatttaagccactgtggctctttccaaaatacaactgaatcagaactt
gatggagaacatagttttttaggtaaatctgaaagttgttcattaaagaaatttcaggat
aaaagtgtatatacatcttttgataaggaggattcaaagacttctgaagaaccaggctca
acaaccaacagcatgacatcaagtgaaagaaacgtctcagaaatggaatcttttgaggaa
ttagaaaaccagaacactgatatctttaatataaaggtaaattcaggggagcaagtgact
gaagaattgatccgaaaggagttagaggctggtaaaagtttggaattgatcgaagtgtcc
agcagaaatggtgcagaagaaggaaaggatggtgtaatctgtgagataatcagtaggaaa
ctggtgacaccaccatctttagtattttgctatgattctaagcaaaatatggaaaaggag
cccagtgaaggagaaactgaaacaaaagtcagaaagatggtggaaagcttggaagctgga
agttctgcagagtcccctctcaattttaaatcaggcctaagaaggtcaggaacttctgat
tggtcagattatagacaaaacatcgagaatgaaccgtcatacaaagcatccagcaatggc
cccagtgacagtgatgaggagatgacccctgagaaagaatgcaacaaaggatttgttaaa
rggacaatagagaaactttatggtaaagcagagatgatgagaccatcttttttcgctgga
tctacacacacatctcaggtttatccctgtgattctgtggaatttcagggcactgggaaa
gtaggcctttatgatcctgaaggtcagtcacttggctctttggaacgggtgtctagtaat
tcaactgtgttgcagaaatttccggagcaaaaacgagataaatgtgatgttawtaacgta
agggccagttatcccagggaagacattgcagaacatggtacaaaacagaatgatcataaa
agaatcctcagggacagggaagagggagtactgattgacaagggcaagtggctcctgaaa
gaaaatcatttgctaagagtgtcatcgcctgaatgttctggcccgtgtggccatgcagac
accacatcagtggatactctactggataatagcagcaccgaggttccgtattcacatttt
ggaaacttggctccaggcccaaacatggctgaactatcctcctcagagctagaggaactg
actcagcctcctgagctgagatgcaattattttaacgtgcctcattgtagtgactcggag
cccttccatgacgatgagctagatactcaagatgaagcttgtgytcaggagagagaaccc
aatcacccagcagaggagaagggtaaccttagatcagagagagtgtgtacgtctgccact
catgtcttcgcgtctgctggtaacaaagtccatcctgtctctgatggtgctgttaggaac
caaccgttggctggtagtaatgtaattcatggcgcccttcaggaaggcgactctttggat
aaactctataatatctgtggtcaacattgcccaatactgactgtgattaaccagcctgta
aatgaggaacaccgaggatttgcatattgcaaagattctgatgttgaaaattctttgagt
ctccagttatggatgaagatacacccatgtttacgacattcaagcaaaaccatgttcaga
gacaagaacaataaaacaagaagtagaagagcacttactgataatgccgttggcaatata
cacgattggcctcattttaataacacatttgacttgatggacagaaggagaaaattaaaa
caaagtaactgtttgggcttagaggaagaaaataatttcaataaatttcagtcatattta
aagaatttcttgcatacgttgttgttagttgtgggtcaggtgaattcaaatccacaagac
cccagcagtcagacaaaggaaatctttgaagtagttgatgagaacaacaacttattaaac
agcagattccagaactcaggaacgaatctcaaccaagtagtcagagaacacagctatcat
ttgtcctttgaaatgcttggccaagccygcctgttttgccaagttgagacattcttaggt
attagcaacagaaatatcttagaaatgttttatatttttgaagatgaaaatcttttcatt
tgggaagaggaaaactaattacattggactgatcttgaaagccgtgatgaacaagcagat
ttccgatttcagtattag
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integrated database retrieval system
