Bos indicus (zebu cattle): 109569536
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Entry
109569536 CDS
T04792
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04270
Vascular smooth muscle contraction
biu04360
Axon guidance
biu04611
Platelet activation
biu04625
C-type lectin receptor signaling pathway
biu04810
Regulation of actin cytoskeleton
biu05135
Yersinia infection
biu05152
Tuberculosis
biu05163
Human cytomegalovirus infection
biu05200
Pathways in cancer
biu05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109569536 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
109569536 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
109569536 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
109569536 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
109569536 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109569536 (ARHGEF12)
05205 Proteoglycans in cancer
109569536 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
109569536 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
109569536 (ARHGEF12)
05152 Tuberculosis
109569536 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109569536 (ARHGEF12)
Membrane trafficking [BR:
biu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109569536 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
109569536
NCBI-ProteinID:
XP_019830544
UniProt:
A0A6P5CZI4
LinkDB
All DBs
Position
15:29598237..29766232
Genome browser
AA seq
1544 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVTSSKPLADGLAVGEGEADPGDGLGRLDCGSGDAS
RPGSDSADSPKSGLKERIYLEENPEKSEAIQDTDTQSLVGSPSTRVAPHIIGAEDDDFGS
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHXFFLDRSAHLKVSVPEEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDVERDKDRLTLEKERACAEQIVAKIEEVLMTAQAVEEEK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFTSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHLSTPSSVSPEPQDSAKLRQSGSASEGADTGY
LPANSTSSMVAGATLSQEGGKENDMGSKQAGETPASGDSLDGTPRTPNTIFDFPPPPLDQ
VQEEEWEVERVTEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAIRKRNETSVIDQIGEDLLIWFSGSGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQPPPCEGDNDEEEPPKLKVEHHDISVTGLQSPDRDLGLESPLMSSKPQSHSLGTS
GKSEVDDLFVAERQFAKEQHADGTLKEVGVNYQVTIPDPHLPGSEERWALDALRNLGLLK
QLLVHQLGLTEKSTQEDWPHFPRCRTASLGVQADSGTQNPENIKACHPVEAQMPFRTGTG
DISTCYSPRTSTESSAPRDSVVLAFQESQASDILIMDHMIMTPEMPPSEPEGGLDESGEH
FFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGTYLILDGYDPVQESSTDDEVASSFPLQ
PGAGIPSLDSGHQQQPSPQNAHSDGAVSPFNPELLVQQRWGAMEDSCFEIQSPSACADSQ
SQIMEYIRKIEADLEHLKKVEESYTILCQRLAGSALTDKHSDKS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtaca
tcacatgattttgaccccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtgttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggagtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaagtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgcccccctgggtcgccccagattccacttgctgattctgaa
gtagagccatcagtcactggacatatgtctcccatcatgacatccccccattcacctggt
gcatctgggaatatggagagaattactagtcctgtgctcatgggggaagaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacggctt
cagctattgcaggaagactacaaccgaacacctgctcagagattgctaaaagagatccaa
gaggccaagaaacacattcctcagctgcaagagcagttatccaaagccacaggctctgct
caggatggagctgtagttacatcctccaagccgctagctgacgggctagcagtgggtgaa
ggagaagcagatcctggtgatgggctaggcagacttgactgtggcagcggagaygcttct
cggcccggtagtgacagtgctgatagtcccaagagtggcttgaaagagaggatttatcta
gaggaaaacccagaaaaaagtgaagcaattcaggacactgacactcagtcgcttgttggg
agtccctctacccgtgtggcacctcatattattggagcagaagacgatgactttggtagt
gaacatgaacagatcaatgggcagtgcagctgttttcagagcattgaactgctaaaatct
cgccctgctcacttggctgtcttcttacaccatgtagtttcccagtttgaccctgcaaca
ttgctctgttatctctattcagacctatataaacagaccaattccaaggagacccgtcgt
gtcttccttgagttccatcrgttcttcctggatcgatctgctcacctgaaggtttctgtt
cctgaggaaatatcagtagatctagaaaaaagacgaccagagcttattcctgaggatcta
catcgccactatatccagactatgcaagaaagagtccacccagaagttcagaggcacttg
gaagattttcggcagaagcgcagcatggggctgaccctggctgaaagtgaactgactaaa
cttgatgtagagcgagacaaggaccggttaactttggagaaggaacgggcatgtgcagaa
cagattgttgccaaaattgaagaagtgttgatgactgcccaggctgtagaagaagaaaag
agttcgacaatgcagtatgttattctcatgtacatgaaacatttgggagtaaaagtgaaa
gaacctcgaaatttggagcacaagcgaggtcggattggattccttccaaaaatcaagcaa
agtatgaagaaagatagagaaggcgaagaaaaggggaagcgaagaggattcaccagcatc
ttgggaccccctaggagaccaagccgccatgataacagcgcaattggcagagccatggaa
ctgcagaagcagcgccaccctaagcacttgtccacaccctcatctgtgagtcctgarcct
caggattctgcgaagctgcgccagagtgggtcagcaagtgaaggagcagacactggatac
ctgccagccaattccacgtcctccatggttgcaggggccactctttcccaggaaggaggg
aaagagaatgatatgggatcaaaacaagctggagaaacgccagcatctggagactccttg
gatggcactcctcgtactcccaacaccatctttgatttcccacctcctccattagaccag
gtgcaggaggaagaatgggaagtggagagagtgactgaacatgggacaccaaagcccttt
cgaaagtttgacagcatagcttttggagaaagtcagagtgaggatgaacagtttgaaaat
gacttagagacggacccacccaactggcaacagcttgtcagtcgagaagtgttattggga
ctaaagccttgtgagatcaaaagacaggaagtaattaatgaattgttctacactgaaaga
gctcatgttcgaacattgaaggttctagatcaagtgttttatcagcgagtgtccagagaa
ggaattttgtcaccytcagaactacggaaaattttttcaaacttagaagatattcttcaa
cttcacattggattgaatgagcaaatgaaggcyattcggaagaggaatgagacctctgtt
attgatcagattggggaagatttgctgatctggttcagtggatccggggaggaaaagttg
aaacatgctgctgctaccttttgcagtaaccaaccctttgccctggaaatgatcaagtct
cgccagaaaaaggattctcgattccagacttttgtgcaggacgctgagagtaatccactg
tgtcgtcgtttgcagctaaaggatatcattcccactcaaatgcagaggcttactaagtac
cctcttctcctggacaatattgccaaatacacagagtggccaacagaaagggagaaggtg
aagaaagctgcagatcactgtcgtcagatcttaaattatgtgaaccaggctgttaaggag
gcagagaacaagcagcgcttggaagattatcagcgtcgccttgatacctctaatctgaag
ttgtcagaatacccaaatgttgaagagctcaggaatttggatttaacaaaaaggaagatg
attcacgaaggcccattggtttggaaggtgaatagagataaaacaattgatctgtataca
ttgctgctggaagatattcttgtattgttacaaaagcaggatgatagactggtgttaagg
tgtcacagtaagattctggcatctacagctgacagcaaacacacatttagccccgtcatc
aagctgaatacggtgttggttcgacaagtggcaacagataacaaagctttattcgtcatc
tccatgtctgataatggagcccaaatttatgaactggtggcacagacagtttctgaaaag
actgtctggcaggacctaatatgtcggatggccgcatccgtgaaggagcagtccacaaag
ccaatcccactgccccagccgccaccgtgcgaaggagacaacgatgaagaagaacctcca
aaattaaaagtggaacatcatgacatttcagtcactggtctgcagagtccagacagagat
ttgggattagagtctcctttaatgtcatcaaaacctcagtctcattcgctgggtacctct
gggaagtcggaagtagatgacctctttgtggctgagagacagtttgcaaaggagcagcat
gcagacgggacactaaaggaagtcggagtgaattatcaagtcacaatcccagatccacac
ttgcctggctcagaagaacggtgggccctggatgcactaaggaatttgggtttgttgaag
cagctgctggtacaccagctgggcttgactgagaagagcactcaggaagactggccacat
tttccaagatgcaggacagcctctctgggggtgcaggcagacagtggaacccagaaccct
gaaaatattaaggcctgtcatcctgttgaagcacagatgccctttagaactggaactggt
gacatttcaacttgttacagtccacggacttcaactgaatcttctgctccacgggattca
gtagtactggcattccaagagagccaggcaagtgacattttaataatggaccacatgatt
atgaccccagagatgcctccctcagagccagaagggggtcttgatgagagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagtt
aaaaaggaagagaaggatgttaatttgcgcatctcaggaacctatctgatccttgatggc
tatgacccggtgcaggagagctccacagacgacgaggttgcttcctcgttcccccttcag
cccggggcaggcatcccctctctggactctggacaccagcagcagccttctccccagaat
gctcattctgatggggctgtttcaccgttcaacccagaattactggtccagcagcgctgg
ggagctatggaggattcctgttttgagatccagagtccctctgcttgtgctgattcacaa
agccagatcatggagtacattcgtaaaatagaggctgaccttgaacacttaaagaaggtg
gaggaaagttacaccattctttgccaaaggctggctggatcagccctcacagacaagcac
tcagataaaagttag
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integrated database retrieval system
