Bos indicus (zebu cattle): 109569602
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Entry
109569602 CDS
T04792
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04140
Autophagy - animal
biu04148
Efferocytosis
biu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109569602 (VPS11)
04148 Efferocytosis
109569602 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109569602 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109569602 (VPS11)
Membrane trafficking [BR:
biu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109569602 (VPS11)
Hops complex
109569602 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
DUF1993
zf-RING-like
zf_RING_Vps8_fungal
DLP_helical
DUF5847
Motif
Other DBs
NCBI-GeneID:
109569602
NCBI-ProteinID:
XP_019830695
UniProt:
A0A6P5CYC9
LinkDB
All DBs
Position
15:28280133..28290448
Genome browser
AA seq
945 aa
AA seq
DB search
MATYLQWRRFVFFDKELVKEPQGNDGAAPGAAPASGPAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLICPQVKIW
NLEKRDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRH
SKTQILHKGSYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCS
ALSDPSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKS
EFTSRDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKD
TQTKLEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIG
KLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKT
KSESEVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKL
PFEQAESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGRGDREAPGCRANSEEFIPI
FANNPRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEEDPQVKEKLHAEAISLLKS
GRFCDVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVVAVCERHGEQE
PSLWEQALSYFARKEEDCKEYVAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIRDYLV
QKLQKQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHF
LCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFS
VIADYFGRGVFNKLTLLTDPPTARLTASLEAGLQRDLLMHARRGT
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctatctgcagtggcggcgcttcgttttcttcgacaaggagctggtgaaggag
ccacagggcaatgatggggctgctcccggggccgcgcctgcctctggacccgctgcttcc
aagttcctttgcctccctcctggcatcacagtctgcgactcaggccgagggagcctagtc
tttggagatatggaaggccagatctggttcttgccccgctccctacagcttacgggtttc
caggcctacaaactacgggtgacacacctgtaccagctgaagcagcacaatattctggcc
tctgttggtgaggacgaagagggcatcaaccccctgatctgtccccaggtaaagatctgg
aacctggagaagagagatggtggtaatccactctgcactcgaatcttccctgccatcccg
gggacagaaccgactgttgtatcttgtttgactgtccatgaaaatctcaactttatggcc
attggtttcacagatggcagtgttacactgaacaaaggggacatcactcgggaccgacat
agcaagacccagattttgcacaagggcagctatcctgttactggactggcctttcgccaa
gcgggaaagaccactcacttgtttgttgtgacaactgagaatgttcagtcctacatagtt
tctggaaaggactatcctcgtgtggaattggacacccatggctgtggcctgcgctgctca
gccctcagcgacccttctcaggacctgcagttcatagtggcaggggatgaatgtgtctat
ctgtaccagcctgatgaacgtgggccctgctttgcctttgaaggccataaactcatcgct
cactggtttagaggctatcttgtcattgtctcccgtgaccggaaggtttctcccaagtca
gagtttaccagccgggactcccagagctctgacaaacagattctcaacatctatgacctg
tgcaacaagttcatagcctatagcgctgtctttgaggatgtagtggatgtgcttgctgag
tggggctccctgtacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggac
acacagaccaaactggagatgctgtttaagaagaacctgtttgagatggcaattaacctg
gccaagagccagcatctggacagcgatgggttggcccagatcttcatgcagtatggggac
catctctacagcaagggcaaccatgatggtgctgtccagcagtatatccgaaccattgga
aagttggagccatcgtacgtgatccgcaagtttctcgatgcccagcgcatccataacctg
acagcctacctgcagaccctacatcggcagtccttggccaacgccgaccacaccaccctg
ctgctcaactgctacaccaagctcaaggacagctccaagctggaggaattcatcaagaca
aagagtgagagtgaagtccactttgatgtggagacagccatcaaggtcctccggcaggct
ggctactactctcacgccctctatttggctgagaaccatgctcatcatgagtggtacttg
aagatccagctagaggacatcaagaattatcaggaagccctccggtatattggcaagctg
ccttttgagcaggctgagagcaacatgaaacgctatggcaagatcctcatgcaccatata
ccagagcagacgacccagctgctgaagggactctgtaccgactatcggcctagccttgaa
ggccgaggtgatagggaggctccaggctgcagggccaactcggaggagttcatccccatc
tttgccaacaaccctcgagagctgaaagcgttcctagagcacatgagtgaggtgcagcct
gactccccgcagggcatctatgacacgctgcttgagctgcgactccagaactgggcccac
gaggaggatccgcaggtcaaagagaagcttcacgcagaggccatctccctactgaagagt
ggccgcttctgtgatgtctttgacaaggccctggtcctctgccagatgcacgacttccag
gatggagtcctttacctctatgagcagggcaaactgttccagcagatcatgcactaccac
atgcagcacgagcagtaccggcaggtggtggccgtgtgcgagcgccacggggagcaggag
ccctccctgtgggagcaggcgctcagctactttgcccgcaaggaggaggactgcaaggag
tacgtggcggctgtgctcaagcacatcgagagcaagaacctcatgccgccccttctagtg
gtgcagaccctggcccataactccacggccaccctgtctgtcatccgggactacctggtc
caaaaactgcagaaacagagccagcagatcgcccaggatgagctccgggtgcggcgctac
cgagaggagaccacccgcatccgccaggagatccaggagctgaaggcaagtccaaagatt
ttccagaagaccaagtgcagcatctgtaacagtgccttggagctgccctcagtccacttt
ctctgcggccactccttccaccaacactgctttgagagttactcggaaagtgacgctgac
tgccccacctgcctccctgaaaaccgcaaggtcatggatatgatccgggcccaggaacag
aagcgagatctccacgatcagtttcagcatcagctcaagtgctccaacgacagcttctct
gtgattgctgactactttggccgaggtgttttcaacaaattgactctgctgaccgacccg
cccacagcccgactgactgcgagcctggaggccgggctgcagcgggacttgctcatgcac
gccaggaggggcacttaa
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