Bos indicus (zebu cattle): 109569645
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Entry
109569645 CDS
T04792
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04136
Autophagy - other
biu04140
Autophagy - animal
biu04211
Longevity regulating pathway
biu05010
Alzheimer disease
biu05014
Amyotrophic lateral sclerosis
biu05016
Huntington disease
biu05017
Spinocerebellar ataxia
biu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109569645 (ATG13)
04136 Autophagy - other
109569645 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
109569645 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
109569645 (ATG13)
05014 Amyotrophic lateral sclerosis
109569645 (ATG13)
05016 Huntington disease
109569645 (ATG13)
05017 Spinocerebellar ataxia
109569645 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
109569645 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109569645 (ATG13)
03029 Mitochondrial biogenesis [BR:
biu03029
]
109569645 (ATG13)
Membrane trafficking [BR:
biu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109569645 (ATG13)
Atg1 complex
109569645 (ATG13)
Mitochondrial biogenesis [BR:
biu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109569645 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109569645
NCBI-ProteinID:
XP_019830794
UniProt:
A0A6P5CYR1
LinkDB
All DBs
Position
15:77092425..77134549
Genome browser
AA seq
565 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGDVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTXGEDTGV
ACPSVEDSQEVCATSFSTSPPSQCVFTVTKALFQTPTPVVTDTLRVPTAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNAAHPQQLMVPGKEGGVPLGPSQPAHAAQADQER
LATYTPSDGAHCAATPSSSEDAETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMPVPRTSPCLRLVLKQVNPPDSPETTSPLQGSLHSDGS
SGGSSGHTQDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSLDIGAQSMAEDL
DSLPEKLAAHEKNVREFDAFVETLQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcttaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggagagaagatttgtactcgt
tcgtcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggccctggcagggcagctgcctgctgttgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgctgtgtacaacaga
ttgtcgttgctgctgaagtctctgcttgctataactagggtgacaccagcttacagactc
tccagaaagcaggggcatgaatatgtcatcttatacagaatatattttggggacgttcag
ctgaatggcttaggggaaggtttccagacagttcgtgttgggacagtgggtacccctgtg
ggcaccatcactctttcctgtgcttacaggattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatgggcattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaattacagaaccrccggcgaggacactggagta
gcgtgtccttctgtggaagactctcaggaagtgtgcgccacctccttttccacctcgcct
ccctcccagtgtgtgtttacggtcacaaaggcactttttcagacccctactcctgtggtg
acggacaccctgagggtccccacggcaggactggccttttcccatcaactctccagctct
cgcctttcctatcagcctgctgccctgggcgttggatctgctgacctggcttatccagta
gtgtttgctgctggcttaaacgccgcacaccctcagcagctaatggtcccygggaaggaa
ggtggggtaccccttggtcccagccagcctgcccatgctgcccaggctgaccaggagaga
ctggcaacctacaccccttctgatggggcccactgcgccgccacgccgtccagcagtgag
gaygctgaaactgtatcaaacagcagcgagggacgggcctccccccacgatgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaacctggagctggaggatgca
gatcccatgccagtgcccaggaccagcccctgcctccgccttgttctgaaacaggtgaat
cccccagattccccagagactacatctcctctccagggcagcctgcactctgatggctcc
agcgggggcagcagcggccatacccaggacgacttcgtcatgatcgactttaaaccagct
ttttctaaagacgacatccttccgatggacttggggaccttctatcgtgaatttcagaac
ccgcctcagctgagcagcctctccctcgacatcggggcccagtccatggccgaggacttg
gactcactcccagagaagctggctgcgcacgagaagaatgtccgagaatttgatgccttt
gtagaaaccctgcagtaa
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integrated database retrieval system
