Bos indicus (zebu cattle): 109569656
Help
Entry
109569656 CDS
T04792
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109569656 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109569656 (PATL1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109569656 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
109569656 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
109569656
NCBI-ProteinID:
XP_019830818
UniProt:
A0A6P5CYK7
LinkDB
All DBs
Position
15:complement(83876871..83905025)
Genome browser
AA seq
781 aa
AA seq
DB search
MPSVQKVIMKLLCRLSLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAH
ERLAELEEKLPAAVNEQSGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQT
RPVLQPQPGSLNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSE
RALPRRSTSPVIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGE
RMSPNQLCSVPNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVG
SPLAAMNPKLLQGRIGQMLPPAPGFRAFFSAPPPTTPPPPQQHPPGPGPHLQNLRSQAPM
FRPDTTHLHPQHRRLLHQRQQQNRNQHRNLNGXGDRGSHRSSHQDHIRKDPYANLMLQRE
KDWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSAAEEMQGDGPKKERTKLITPQVAKL
EHTYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLFIIEKT
YSLLLDVEDYERRYLLSLEEERPALMDERKHKICCMYDNLRGKLPGQERPSDDHFVQIMC
IRKGKRMVARILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPP
VTVTSLLQQLMNLPQSAAAPAPSNPHLSAVLQNKFGLSLLLVVLSRGEDLQSSDAASELA
QSNPWTEVMFVATRELLRIPQTGLAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGI
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgtacagaaagtcataatgaagctattgtgtagattgtctttggaggattgt
cctctggatgaagatgaagatgcatttcagggcctgggagaggaggacgaagagattgat
caattcaatgatgatacatttgggtcaggtgcagttgatgatgattggcaggaagcacat
gagcgcctggctgaactggaagagaagctacctgcagcagttaatgaacaaagcggcaat
ggagaaagggatgagatggacttgttgggtgaccatgaggagaatctrgcagagaggctc
agcaagatggtgattgaaaatgaacttgaagacccagctatcatgagggcggtacagacc
aggcccgtgttgcaaccccaaccaggaagtctcaattccagcatctgggatggatctgaa
gttctgaggcgaatccgaggaccactgcttgctcaggaaatgcctacagtgtctgtgtta
gaatatgccttgcctcagaggcccccccagggcccagaagacgatcgggacctttccgag
cgcgcattaccaaggcggtccacctcgcctgtcattgggagtcctcctgttagagctgtc
cccataggcaccccacctaagcagatggctgtgcccagcttcaaccagcagattctgtgt
ccaaagcctgtccacgttcggcccccaatgccgccacggtatcctgctccctatggtgag
aggatgtctccaaaccagctctgcagtgtcccgaactcctccctgctgggccaccctttt
ccccctagcgtccctcctgtcctcagccccctccagagagcacagcttcttggaggagca
cagctacagcctggacggatgtctcccagccagtttgcacgggtccctggattcgtgggc
agcccacttgccgccatgaatcccaagctgttgcaagggcgaattggacagatgctcccc
ccggcgccaggcttccgcgccttcttcagcgccccaccccccactacaccaccccctccg
cagcagcacccccctggcccaggaccccacctgcaaaacctaagatcacaggctccaatg
tttagaccagacacaacccaccttcatccacagcaccgtcgacttttgcatcagagacag
caacagaatagaaatcaacatcggaatctcaacggtgyaggagacagagggagtcaccgg
agcagtcatcaggatcatatccgaaaggatccgtatgccaacctcatgctgcagcgagaa
aaagactgggtctctaaaatccagatgatgcaactgcaaagcactgatccctacctggat
gatttttattatcagaattactttgaaaaactggagaaactgtcagctgctgaagaaatg
caaggtgacggcccaaaaaaggagcgcaccaagctcatcacgcctcaggtggccaagctg
gagcacacctacaarccagtgcagtttgagggctctttgggaaagctcactgtctctagt
gtgaataatccccgaaaaatgattgatgctgttgtgacgtctcggagtgaggatgatgag
acaaaagaaaaacaggttcgggacaaaagacgaaaaacccttttcataattgagaaaacc
tatagtttactgcttgatgtggaggattacgaaaggcgttatctcctaagtctggaagaa
gagcgacctgccctgatggatgaaagaaagcacaaaatttgttgcatgtatgacaactta
agggggaaattgcctggacaggagaggccgagtgatgaccactttgtacagatcatgtgt
atccgaaaggggaagagaatggtagcccggattctgcctttcctctccacagagcaagca
gctgacattctcatgacaacagccaggaacctccctttcctcatcaagaaggacgcacag
gatgaggtgctgccatgcctattgagtcccttctctctcctcctctaccatcttccacca
gtgaccgtcaccagccttctgcagcagctgatgaacctacctcagagtgcagcggcccca
gctccgtccaacccgcacctctctgccgtgctccagaacaagtttggcctgtccctgctc
ctcgtcgtcctgagccgcggggaagacctacagagctcagacgcygcttcagaattggcg
caaagcaacccatggacggaggtgatgtttgtggcaacccgagaacttttgcggattccc
cagacgggcctggccaagccaatctctatacccacaaacctagtatccctcttttctcgt
tacgttgaccgacagaaactgaacttgctggagacaaaactgcagctagttcaggggata
cggtaa
DBGET
integrated database retrieval system
