Bos indicus (zebu cattle): 109570003
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Entry
109570003 CDS
T04792
Symbol
DSCAML1
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
biu04515
]
109570003 (DSCAML1)
Cell adhesion molecules [BR:
biu04515
]
Immunoglobulin superfamily
DSCAM family
109570003 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
109570003
NCBI-ProteinID:
XP_019831395
UniProt:
A0A6P5D0I7
LinkDB
All DBs
Position
15:complement(26644321..27010703)
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AA seq
2112 aa
AA seq
DB search
MTGAREPRREEPPPPSAGLRSGESGARSAGGWERAERGRGAAARPATGPPPRRIGPLYGM
WLVTFLLLLDSLHKARLEDVGTSLYFVNDSLQQVTFSSSVGVVVPCPAAGSPSAALRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGSVAVFKCLIPSSVQEYVSVVSWEKDTVAIVPENRFLITSHGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAGH
TMELPCTASGYPIPAIRWLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEVTNTFG
SAEVTGTLTVIDPLHVTLTPKNLKTGIGSTVILSCALLGSPEFTIRWYRNTELVLPSEAI
SIRGLSNETLLITSAQKSHSGAYQCFATRKTQTAQDFAIIVLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTITWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRBGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLVNCRVIGYPYYSIKWYKD
ALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIAT
KDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKTDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVP
SSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMRDVRLPCNSVGDPAPAV
KWTKDSEDSAIPVSMDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQ
VPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFVSSSERSFR
LDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWNNGGCPITAIMLEYRPKGTWAWQGLRANSSGEVFLTELREATWYELRMRACNSAGCGN
ETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDAEFSQAVNPQSFCTGVSLHHPALIQSSGPLIDMSDIRPGTNPVSRKNVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSXSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTP
SEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKAEGREPCP
VVPPREASIRNVTRTYHPQARHLTLDPASKPLGLPHPGAPTAASTATLPQRTLAMPAPPA
GPAPAAPGPAPAEPPAAPSTAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQ
GAGAYSKSYTLV
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagcgagggagccgaggagggaggagccgccgccgccgagcgctgggctgagg
agcggagagagcggggcgcggagtgcgggcggctgggagcgcgctgagcgggggagaggc
gctgccgcacggccggccacaggaccacctccccggagaatagggcctctttatggcatg
tggctggtaactttcctcctgctcctggactctttacacaaagcccgccttgaagatgtc
ggcaccagcctctactttgtaaatgactccttgcagcaggtgaccttctccagctccgtg
ggggtggtggtgccctgcccggccgcgggctcccccagcgcggcccttcgatggtacctg
gccacgggggacgacatctatgacgtgccgcacatccggcacgtccacgctaacgggacg
ctgcagctctaccccttctccccctccgccttcaatagctttatccacgacaatgactac
ttctgcacagcggagaacgctgccggcaagatccggagccccaacatccgcgtcaaagca
gttttcagggaaccctacaccgtccgggtggaggatcaaaggtcgatgcgtggtagcgtg
gccgtcttcaagtgcctcatcccctcttcagtgcaggaatacgttagcgttgtgtcctgg
gagaaagacacagtcgccatcgtcccagagaacaggtttcttatcacttcccacggcggg
ctgtacatctctgacgtgcagaaggaggacgccctctccacctaccgctgcatcaccaag
cacaagtatagcggggagacccggcagagcaacggggcccgcctctctgtgacagaccct
gctgagtcgatccccaccatcctggacggcttccattcccaggaagtgtgggccggccac
accatggagctgccctgcaccgcctccggttaccccatccctgccatccgctggctcaag
gatggccgacccctcccagccgacagccgctggaccaagcgcatcacggggctgaccatc
agtgacctgcggaccgaggacagcggcacctacatttgtgaggtcaccaacaccttcggc
tcggcagaggtcacaggcaccctcacggtcattgacccccttcacgtgaccctgacacca
aagaacctgaagactggcatcggcagcacggtcatcctctcctgtgccctcctgggctcc
ccagagttcaccatccgctggtaccgcaacaccgagctggtgctgcccagtgaggccatt
tccatccgagggctcagcaacgagacactgctcatcacctcggctcagaagagccactca
ggagcctaccagtgcttcgccacgcgcaagacccagactgcccaggacttcgccatcatt
gtgctggaagatggcactccccgcatcgtctcatccttcagcgagaaggtggtcaaccct
ggggagcagttctcactgatgtgcgcggccaagggtgccccaccccccaccatcacctgg
gccctggacgacgagcccatcgtgagggacgggagccaccgcaccaaccagtacaccatg
tccgatggcaccaccatcagccacatgaacgtcacggggccccagatccgtracgggggc
gtgtaccggtgtacggcacggaactcggtgggcagtgctgaatatcaggcgcgaataaac
gtaagaggcccccccagcatccgggcgatgaggaacatcacggccgtggctgggcgggac
acccttgtcaactgcagggtcatcggctacccctactactccatcaagtggtataaagac
gccctcctgctgcccgacaaccaccggcaggtggtgttcgagaacgggaccctcaagctg
acggatgtgcagaagggcatggacgagggagagtacctgtgcagtgtcctcatccagccg
cagctctccatcagccagagcgtccacgtggccgtcaaagtgccccctctcatccagccc
ttcgagttcccgcctgcctccatcggccagctgctctacatcccctgtgtggtgtcctcg
ggggacatgcccatccgcatcacgtggaggaaagacgggcaggtgatcatctcgggctcg
ggcgtgaccatcgagagcaaggagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacggcaactatacgtgcatagccagcaacgcagcggccactgtgagcagggag
cgccagctcattgtgcgtgtgccccctcgattcgtggtgcagcccaacaaccaggatggc
atctatggcaaggctggtgtgctcaactgctcggtggatggctaccccccacccaaggtc
atgtggaagcatgccaaagggagcgggaacccccagcaataccacccagtgcccctcacc
ggccgcatccagatcctgcccaacagctcgctgctgatccgccacgtcctggaagaggac
atcggctactacctctgccaggccagcaacggcgtgggcaccgacattagcaagtccatg
ttcctcaccgtgaagatcccagccatgatcacctcccaccccaacaccaccatcgccatc
aagggccacgccaaggagctcaactgcacagcacgaggcgagcgacccatcattatacgc
tgggagaaaggggacacggtcatcgaccccgaccgcgtcatgcggtatgccatcgccacc
aaggacaacggcgatgaggttgtctccacgctgaagctcaagcccgctgaccgtggggac
tctgtgttcttcagctgccatgccatcaactcatatggggaggaccggggcctgatccag
ctcacggtacaagagccccctgaccccccagagctggaaatccgagaggtgaaggcccgg
agcatgaacctgcgctggacccagagattcgatgggaacagcatcatcacgggctttgac
attgagtacaagaacaaaacagattcctgggacttcaagcagtccacacgcaacatctcc
ccgaccatcaaccaggccaacatcgtggacttgcacccggcctccgtgtacagcatccgc
atgtactccttcaacaagattggccgcagcgagccgagcaaggagctcaccatcagcact
gaggaggctgctcctgatgggcctcccatggatgtaaccttgcagccagtgacctcacag
agcatccaagtgacctggaaggcgcccaagaaggagctgcagaacggtgtcatccgtggc
taccagatcggctacagagagaacagcccgggtagcaacgggcagtacagcatcgtggag
atgaaggccactggggacagcgaggtctacaccctggacaacctcaagaagttcgcccaa
tatggcgtggtggtccaggccttcaatcgggcaggcacggggccctcatccagcgagatc
aatgccaccaccctggaggacgtgcccagccagccccccgagaacgtccgggccctgtcc
atcacttccgacgtggccgtcatctcctggtcggagcccccgcgcagcaccctcaacggc
gtcctcaaaggctatcgggtcatcttctggtccctctacgttgacggggagtggggcgag
atgcagaacatcaccacgacgcgggagcgggtggagctgcgaggcatggagaagttcacc
aactacagcgtgcaggtgctggcctacacccaggccggggatggtgtgcgcagcagcgtg
ctctacatccagaccaaggaggacgttccaggtccccctgcgggcatcaaagctgttcct
tcatccgccagcagtgtggtcgtgtcatggctccccccaaccaagcccaacggggtgatc
cgcaagtacaccatcttctgttccagccccgggtctggccagccggcacccagcgagtat
gagacaagtccggagcagctcttctacaggatcgcccacctaaaccgtgggcagcagtac
ctgctgtgggtggccgccgtcacctccgccggccggggcaacagcagtgagaaggtgacc
atcgagcctgctggcaaggccccagcaaagatcatttctttcgggggcaccgtgacaaca
ccctggatgagagatgtgcggctgccttgcaattcagtgggagacccagcccctgcggtg
aagtggaccaaggacagtgaggactcagccatccccgtgtccatggacgggcaccggctc
atccacaccaatggcacgttgctgctgcgcgcggtgaaggctgaggactcaggctactac
acctgcacggccaccaacactggcggcttcgacaccatcattgtcaaccttctagtgcaa
gttcccccggaccagccccgtctgactgtctccaaaacctcggcttcatccatcactctg
acctggattccgggtgacaatgggggcagctccatccgaggcttcgtgctgcagtactcg
gtggacaacagtgaggagtggaaggatgtgttcgtcagctcgagcgagcggtccttcagg
ctggacagcctcaagtgcggcacgtggtacaaggtgaagctggcggccaagaacagcgta
ggctctgggcgcatcagtgagatcattgaggccaagacccacgggcgggagccctccttc
agcaaagaccagcacctcttcacccacatcaactccacgcatgctcggcttaacctgcag
ggctggaacaacgggggctgccccatcaccgccatcatgctggagtaccggcccaagggc
acctgggcctggcagggcctgcgcgccaacagctccggggaggtgtttctgaccgagctg
cgggaggccacgtggtacgagctgcgcatgagggcttgcaacagcgctggctgcggcaac
gagaccgcccagtttgccaccctggactacgatggcagcaccatcccgcccatcaagtct
gcacaaggcgagggggacgacgtgaagaagctgttcaccatcggctgcccggtcatcctg
gccacactgggggtggcgctgctcttcatcgttcgcaagaagaggaaagagaagcggctg
aagcggctccgagatgcaaagagtttggcagaaatgttgataagcaagaacaaccgaagc
tttgacacccctgtgaaggggccaccccagggcccacggctacacattgacatccccagg
gtccagctgctcatcgaggacaaggagggcatcaagcagctgggagatgacaaggccacc
atccctgtgactgatgctgagttcagccaggctgtcaatcctcagagtttctgcaccgga
gtctccttgcaccacccagccctcatccagagctcaggacccttgatcgacatgtctgac
atccggcctggcactaatccagtctccagaaagaatgtgaagtcagcccacagcacccgg
aaccggtactcaagccagtggactctgaccaagtgtcaggcctccacccccgcccgtacc
ctcacctccgactggcgcactgtgggctcccagcatggtgttactgtcaccgagagtgac
agctrcagtgccagcctctcccaggacacagacaaaggacggaacagcatggtgtccact
gagagcgcctcttccacctacgaggagctggcccgggcctacgagcacgccaagctggag
gagcaactgcagcacgccaagtttgagatcaccgaatgcttcatctccgacagctcctct
gaccagatgaccacgggcaccaacgagaatgcggacagcatgacgtccatgagcacaccc
tcagagcccggcatctgccgcttcaccgcctccccacccaagccccaggacgctgaccgg
gggaagaacgtggctgtgcccatccctcaccgggccaacaagagtgactactgtaacctg
cccctgtacgccaagtcagaggccttcttccgaaaggcagaggggcgtgagccctgcccc
gtggtcccgccccgcgaggcctccatcaggaacgtgactcgaacctaccacccccaggct
cgccacctgaccctggaccctgccagcaagcccctgggccttccgcaccccggggccccc
acggccgcctccaccgccaccttacctcagaggactctggccatgccggcaccccccgcc
ggcccggcccccgcagcccccggtcccgcccccgccgagcccccggcggcccccagcacc
gcccctccggcccccagcaccgagcctccgcgggccgggggcccacacaccaaaatgggg
ggctccagggactcacttctcgagatgagcacgtcgggggtgggsaggtctcagaagcag
ggggccggggcctactccaagtcctacaccctggtgtaa
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integrated database retrieval system
