Bos indicus (zebu cattle): 109570424
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Entry
109570424 CDS
T04792
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109570424 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109570424 (BARD1)
04121 Ubiquitin system [BR:
biu04121
]
109570424 (BARD1)
03036 Chromosome and associated proteins [BR:
biu03036
]
109570424 (BARD1)
03400 DNA repair and recombination proteins [BR:
biu03400
]
109570424 (BARD1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109570424 (BARD1)
Ubiquitin system [BR:
biu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109570424 (BARD1)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109570424 (BARD1)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109570424 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
109570424
NCBI-ProteinID:
XP_019831955
UniProt:
A0A6P5D246
LinkDB
All DBs
Position
2:complement(107987643..108080841)
Genome browser
AA seq
772 aa
AA seq
DB search
MQGNRQPRVRSGNQPHPAPAMKSAXRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSNCVSDCIGSECPVCYTPAWIQDVKINRQLDSMIQLCSKLQNLLHDTDLSDLKE
KTSRKSLFNDAQSKKNSIKMWFSPRSKKVRYTVSKLSVQTQPSVKNDENAQQTSMYEFVS
PSPPVEVSEGPKKPSTRSRKKQKKKTLAEVNRKWNLEAEKEDGDLDCKGESKEKLVSFCS
QPSVIANLQINGEIDLLASGSVTESECLDEVFLPLAEHIESPEIESKNEVVTPEKTVSAN
YLPSKKSLPSGRNGKRGRHNRISSPVSKRCRSSSQSTGGNSVKQTVLLENMPLLGCSSPP
SNKLKVGDTLSRNSRTILDESISLSPGTPPSTLNSPSYRRMMCSPSATKLWPISHTAVKR
NHRGETLLHIASIKGDIPSVEYLLQSGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK
ALVNTTGYQNDSPLHDAVKNGHVDIVKLLLTYGASREAVNIFGLRPVDYADSENMKSLLL
LPEKTDISSLSHSVVNTGQRRDGPLVLIGSGLSSEQQKMLSELATILKAKKCAEFDGTVT
HVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQSKECEQEEKYEIPEGPQKSRLNRE
QLLPKLFDGCYFYLGGTFKHHPKDNLIKLVAAGGGQILIRKPKPDSDVTQXINTVAYHAK
PDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaccggcagccgagggtccgctccgggaaccagcctcatcccgcgcccgcc
atgaagtcggcnnntcgcggggcctgggcccacagccgcgccgcgcttgaccggctggag
aagctgctgcgctgctcacgctgcactaatattctgagggagcctgtgtgcttaggcgga
tgtgagcayatcttctgtagtaattgtgtaagtgactgcatcggaagtgaatgtccagtg
tgttataccccagcctggatacaagatgtgaagataaacagacagctggacagcatgatc
cagctgtgtagtaagcttcagaatttgctgcacgacactgatctttcagatttgaaagaa
aaaacatctaggaagagtttatttaatgatgcacaaagtaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaagtcagatatactgtgagtaaactttcagtgcaaacc
cagccttctgtgaaaaatgatgaaaatgctcagcagacctccatgtacgaatttgtctct
ccgagccctccrgtggaggtttctgagggacctaagaagccttccacaagatctagaaaa
aaacagaaaaagaaaackttagctgaagtcaaccgaaaatggaatttagaggcagaaaag
gaagatggtgaccttgactgcaaaggggaaagtaaggaaaagctggtatccttctgtagc
caaccatctgtgattgctaacctgcagataaatggtgaaatagacttactagcaagtggg
tctgtaacagaatctgaatgcttagatgaagtctttttaccattggctgagcatatagag
tctccagaaattgagagcaagaatgaagtagtgactcctgagaagacagtctctgcaaac
tatcttccgtccaagaaatctttgccatcaggtcgtaatgggaagcgtgggcgtcacaac
agaatttccagtcctgtttctaagagatgcagaagcagcagtcagagcactggtggaaac
tctgttaagcaaacagtgctcttagaaaacatgccattgcttggctgttcttcaccacct
tcaaacaaacttaaagttggtgacacattaagtaggaatagccgtactatattggatgaa
tccattagcctttcaccaggtacaccgccttctacactgaacagtccaagttacagacga
atgatgtgtagcccttcagcaacaaagctgtggcccattagccatacagctgtgaagaga
aatcatcgaggagagactttgctccatattgcttcaattaagggcgacatcccttctgtt
gaatacctcttacaaagtggaagcgacccaaatgttaaagaccatgctggatggacacca
ttgcatgaagcctgcaatcatgggcacctgaaggtggtggagttgctgctccagcacaag
gcattggtgaacaccactgggtatcagaacgactcgcctcttcatgacgcagtgaagaac
gggcatgtggacattgtcaagctgttactcacctatggcgcctccagggaggcagtcaac
atatttggtctgcggcctgtggattatgcagacagtgaaaatatgaaatcactgttgctg
ctaccggagaagacggacatctctagtctctcccattctgttgtaaacactggtcagcgt
cgggatgggcctcttgtacttataggcagtggactttcttccgaacaacagaaaatgctc
agtgagcttgcaacgattcttaaggctaaaaaatgtgccgagtttgatggtacagtaact
catgtcattgttcctggtgatacagttcaaagcaccctgaaatgtatgcttggaattctc
agtggatgctggatcctaaaatttgaatgggtgaaagcatgtctacaaagcaaagaatgt
gaacaggaagaaaagtatgaaattcctgaaggcccacagaaaagcaggctcaacagagaa
cagctgttgccaaagctgtttgatggatgttacttctatttggggggaaccttcaaacac
catccaaaggacaaccttattaagcttgtcgctgccggtgggggccagatcctcattaga
aagcccaagccagacagtgacgtgactcaaascatcaatacagtcgcgtaccatgccaaa
cctgattctgatcagcgcttctgcacacagtatatcatctatgaggacttgtctaatcat
cgcccagaaagggttcggcagggcaaagtctggatggctccttccagctggtttatagat
tgtgtgatgtcctttgagttgctccctcttgacaactga
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