Bos indicus (zebu cattle): 109570605
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Entry
109570605 CDS
T04792
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109570605 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109570605 (EXOSC10)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109570605 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
109570605
NCBI-ProteinID:
XP_019832228
UniProt:
A0A6P5D2A6
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Position
16:39272352..39295825
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AA seq
887 aa
AA seq
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MAPPSPRESKAQSATTAAKSDGEMVLPGFPDADSFVKFALGAVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVNKNQQPVLPAGLQVPQTIVSSWNRKAGEYSKKTKSETFRLLHAKNI
IRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRERPQDRPEDLDVPPALADL
IHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPEPQLYRPVGETPCHFVSTLDELVEL
NEKLLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQ
LADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNEQPTQLQVVWQRSRDICLKK
FIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVAAGVRKSGPLPNPE
RLENVLFGPHDCSHTPSDGYPLVPTDGPVPMQKQEGLLSAQEDEETLPDIRCLVATAVVT
LFNEPSAEGNEKSPLTVAQKKAQNIMESFENPFRMFLPSVEHRAHISQSAKFDPSSKIYE
ISNRWKLASQVQVQREPKETAKKKAAEHTAARDQAQEEYRAAAEQAVSVRQQAALENAAK
KRERATSDPRTTEQKQEKKRLKISKKPKDPDPPEKDFTPYDYSKLDFKAFAGNSKSKPSS
QFDPSKQPQSGKKYIAAKKIKQSIGNKSMSFPTGKSDRGFRHNWPKR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccaagtccccgagagtccaaggcccagtcagccacgaccgcggccaagtct
gacggggaaatggtgctgccgggcttcccggacgcagacagcttcgtgaagttcgctctt
ggggcagtggtggcagtcaccaaggcgtctgggggcctaccacagtttggtgatgagtat
gatttttaccgaagttttcctggcttccaggcattttgtgaaacacagggagacaggttg
cttcagtgcatgagtagggtgatgcagtaccacgggtgccgaagcaacattaaggaccgg
agtaaagtgaccgagctggaggacaagtttgatttgctggtcgacaccaatgatgttatt
ctggaaagagtgggcattttactggacgaagcatcaggcgtgaataagaatcaacaacct
gtcctccctgcagggttacaggtcccccaaaccatagtgtccagctggaaccggaaggca
ggagaatatagcaaaaaaacaaaatctgaaactttccggctgcttcatgcaaaaaacatc
atccgacctcagcttaagttccgagagaagatcgacaactctaacacaccatttcttccc
aaaatcttcattaagcccaatgctcagaaacccctccctcaggcactctccaaagaaagg
cgggaacgcccacaagaccgccctgaggacttggatgtcccccctgccctggcagattta
atccatcagcagagaacccagcaggtggagcaggacatgtttgcgcatccttatcaatat
gaactagatcacttcacgccaccagactcagtccttcaaaagccagagcctcagttatac
agacctgtaggagagacaccctgccacttcgtgtccacactggatgaactagtggaactc
aacgaaaagctcctgaagtgtcaagaatttgcggtagacttagagcaccactcttacagg
agcttcctggggctcacctgcctgatgcagatttccacccggacagaagacttcatcatt
gacactctggagcttcgcagcgacatgtatattctcaacgagagcctcacagacccagct
attgttaaggtcttccatggtgctgattcagacatagaatggctccagaaggacttcggg
ttgtacgtggtgaacatgtttgatacccaccaggcagctcgccttcttaacctgggcagg
cactccctggaccacctgctgaagctctactgcagcgtggagtcgaacaagcagtaccag
ctggccgactggcggatacgacctctgccggaggaaatgctgagctacgcccgagacgac
actcactacctgctgtacatctatgataagatgcggctggagctgtgggagcgcggcaac
gagcagcccacacagctgcaggtggtgtggcagcgcagtcgagacatctgcctcaagaaa
ttcatcaaacccatcttcacagacgaatcttacctggaactctataggaagcagaagaag
catctgaacacacagcagttgacagcctttcagctgctgtttgcctggagggataaaaca
gctcgtcgggaagatgagagttatggatacgtcctgccaaaccacatgatgctaaagata
gctgaggagctgcccaaggaacctcagggcatcatcgcttgctgtaaccccgtgcctcct
cttgtacggcagcagatcaacgaaatgcaccttctgattcagcaggcacgagagatgcct
ctgctcaagtctgaagtcgcagcgggagtgaggaagagtgggccgctgcccaaccctgag
agattggagaatgttctctttggcccccatgactgctcccataccccgtcagatggctac
cctctcgtcccaactgacgggcctgtgccgatgcagaaacaggagggcctcctctccgcc
caagaagacgaggagaccctgccagacatcagatgtctcgtcgctaccgctgtcgtcaca
ttatttaacgaacctagtgctgaaggaaatgaaaaaagtccattaacggttgcacagaaa
aaagcccagaacataatggagtcctttgaaaatccatttcggatgtttctgccttcagta
gaacaccgggctcacatttctcagtcagcaaagtttgatccatcatcgaaaatctatgaa
atcagcaaccgttggaagctggcaagccaggtacaggtacaaagagaacctaaagaaact
gccaagaagaaggcagctgagcacacagctgcccgggaccaggcccaagaggagtatagg
gcagccgcggagcaggccgtgtccgtccgccagcaggctgcactagagaacgctgccaag
aagagagagcgggcgacgagtgacccgaggacgacagaacagaagcaagagaagaaacgc
ctcaaaatttccaagaagccaaaagacccagatccaccagaaaaagacttcactccctat
gactacagcaagttggatttcaaggcttttgctggaaacagcaaatccaaaccctcttcc
cagtttgacccaagcaagcagccccagtcaggcaagaaatacattgcagccaaaaaaatt
aaacagtcgattggaaacaaaagcatgtcctttccaactggaaagtcagacagaggtttc
aggcacaattggccaaagagatag
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