Bos indicus (zebu cattle): 109570804
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Entry
109570804 CDS
T04792
Symbol
TNN
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04151
PI3K-Akt signaling pathway
biu04510
Focal adhesion
biu04512
ECM-receptor interaction
biu05165
Human papillomavirus infection
biu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109570804 (TNN)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109570804 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109570804 (TNN)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
109570804 (TNN)
09172 Infectious disease: viral
05165 Human papillomavirus infection
109570804 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109570804 (TNN)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109570804 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
DUF4998
Pur_ac_phosph_N
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
109570804
NCBI-ProteinID:
XP_019832541
UniProt:
A0A6P5D2R3
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Position
16:53839900..53914412
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AA seq
1296 aa
AA seq
DB search
MGLQGRFCFPLVLLLGSVLLVTSAPATLESSGCSEKEQQVTVSHTYKIDVPKSALVQVEA
DPQPLRGDGTSLLAPEETEEQNIVFRHNIRLQTPQKDCELAGSVRDLLARVKKLEEEMAE
VKERCSAQRCCPGAAGLSRHCSGHGTFSLDTCSCHCEHGWEGANCERLACPGACSGHGRC
VDGRCVCEPPYVGADCAYPACPENCSGHGECVRGVCQCHEDFISEDCSERRCPGDCSGHG
FCDTGECYCEEGFTGLDCAQVVAPQGLQLLKSTEDSLLVSWEPSSQVDHYLLSYYPLGKE
LSVKQIKVPKEQHRYEILGLLPGTKYIVTLRNVKKDISSSPQHLLATTDLAVPGTAWVTD
ETENSLDVEWENPLTEVDYYKLQYGPLTGQEVAEVTVPKSGDPKSRYDITGLQPGTEYKI
TVIPMRGDLEGKPILLNGRTEIDSPTNVVTDRVTEDTVAVSWXPVRAVIDKYMVRYISAD
GETKDTAVPREQNSTVLTGLRPGEAYEVYVWAERGNQGSKKVDTTALTEIDSPQNLVTEQ
VTENTATVSWAPVQAVIDRYLVRYTSADGDTREVPVGKEQSSTVLTGLRPGVEYTVHVWA
QKGDRESRKADTKAPTDIDSPQNLVTEQVTENTATVSWAPVQAVIDRYLVRYTSADGDSG
EVPVGKEQSSTVLTGLRPGVEYTVHVWAQKGDQESRKADTKAPTDIDSPKNLVTEQVTEN
TATISWDPVQAVIDRYLVRYTSADGDTGEVPVGKEQSSTXLTGLRPGVEYTVHVWAQNGD
RESRKADTKAPTDIDSPQNLVTKQVTENTATVSWDPVQAVIDRYLVRYTSADGDTREVPV
GKEQSSTVLTGLRPGVEYTVHVWAQKGDRESRKADTKAPTEIDSPQNLMTEQVTENTATV
SWAPVQAVIDRYLVRYTSADGDTREVPVGKEQSSTVLTGLRPGVEYTVHVWAQKGDRXSR
KADTKAPTDIDPPQNLHPSAVTQSGGVLTWTPPSAEIDGYILTYQFPDGTVKEVQLGRGD
QRFELQGLEQGVTLPVSLVAFKGDRRSRSVSTNLSTVGARFPHPSDCSQVQQNSNAASGL
YTIYLHGDASRSLQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRTYVEGFGDPMKEFWLG
LDKLHNLTMGTPTRYEVRVDLQTANESAYAVYDSFQVASSKERYRLTVGKYRGTAGDALT
YHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGRYGETKHSEGVNWEPWKGH
EFSIPFVELKIRPHGYSGEHVLSRKKRMLGENSRTF
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccaggggaggttctgcttccccctggtgctcctgctgggctctgtgctcttg
gtgacctcggccccagccactctcgagtcttctggatgcagcgagaaggagcaacaggtt
acygtcagccacacctacaagatcgacgtgcccaagtctgccttggtccaggtggaggct
gacccccagccccttcgtggtgatggaacctcgctcctggccccagaggagaccgaggaa
cagaatatcgtcttcaggcacaacatccgcctgcaaacgccacagaaggactgtgagctg
gcaggcagcgtgcgggacctcctggcccgggtgaagaagctggaggaggagatggcggag
gtgaaggagcggtgcagcgcccagcgctgctgcccgggagccgctggtctaagccgccac
tgcagtggccacgggaccttttccctggacacgtgcagctgccactgcgagcacggctgg
gagggcgccaactgcgagcggctcgcctgtcccggtgcctgcagtggccacgggcgctgc
gtggatggccgctgcgtgtgcgagccgccctacgtgggcgccgactgcgcctaccccgcc
tgccctgagaactgcagcgggcacggcgaatgcgtgcgtggcgtctgccagtgccatgag
gatttcatatcrgaggactgcagcgagcggcgctgccccggcgactgcagcggccacggc
ttctgtgacacgggcgagtgttactgcgaggagggcttcaccggcctygactgcgcccag
gtggtcgccccccagggactgcagctgctcaagagcacggaggattccctgctggtgagc
tgggagccctccagccaggtggaccactacctcctcagctactacccactgggraaggag
ctctctgtgaagcagatcaaagtgcccaaggagcagcaccgctacgagatccttggtttg
ctgcctggaaccaagtacattgtgaccctgcgcaacgtgaagaaagacatttccagcagc
ccacagcatttactggccaccacagatcttgctgtgcctggcactgcctgggtgacggat
gagacggagaactcccttgacgtggaatgggagaaccccctgaccgaggtggactactac
aagttgcagtatggccccctgacagggcaggaggtggccgaggtcaccgtgcccaagagc
ggtgaccccaagagccgatatgacatcacgggtctgcagccggggacggaatataagatc
acagtcatccccatgaggggagacctcgagggcaagccgattcttctgaatggcaggaca
gaaattgatagtccaaccaatgtggtcaccgaccgagtgactgaagacacagtggcggtc
tcctggkacccagtccgggcggtcatcgataagtacatggtgcgctacatctccgctgac
ggggagaccaaggacacggcggtgcccagggagcagaacagcactgtcctgacaggcctg
aggccgggggaggcctatgaagtctacgtgtgggctgagaggggcaaccaggggagcaag
aaggtggacaccacggccctcacagaaattgacagccctcagaacctggtgaccgagcag
gtgacggagaacacggccaccgtctcctgggccccggtgcaggccgtcatcgacaggtac
ctggtgcgctacacctctgctgacggagacaccagggaggttccggtggggaaggagcag
agcagcaccgtcctgacgggcctgaggccgggtgtggagtacacggtccatgtgtgggcg
cagaagggggaccgggagagcaggaaggctgacaccaaggccccgacagacatcgacagc
ccccagaacctggtgactgagcaggtgacrgagaacacggccaccgtctcctgggccccg
gtgcaggctgtcatcgacaggtacctggtgcgctacacctctgctgacggagactccggg
gaggttccggtggggaaggagcagagcagcaccgtcctgacaggcctgaggccgggcgtg
gagtacacggtccacgtgtgggcgcagaagggggaccaggagagcaggaaggctgacacc
aaggccccgacagacatcgacagccccaaaaacctggtgaccgagcaggtgacggagaac
acggccaccatctcctgggacccggtgcaggccgtcatcgacaggtacctggtgcgctac
acctctgctgacggagacaccggggaggttccggtggggaaggagcagagcagcaccrtc
ctgacaggcctgaggccgggcgtggagtacacggtccacgtgtgggcccagaatggggac
cgggagagyaggaaggccgacaccaaggccccgacagacattgacagcccccaaaacctg
gtgaccaagcaggtgacagagaacacggccactgtctcctgggacccggtgcaggccgtc
atcgacaggtacctggtgcgctacacctctgctgatggagacaccagggaggttccggtg
gggaaggagcagagcagyaccgtcctgacgggcctgaggccgggcgtggagtacacggtc
cacgtgtgggcccagaagggggaccgggagagcaggaaggccgacaccaaggccccgaca
gaaattgacagcccccagaacctgatgacygagcaggtgacggagaacacggccaccgtc
tcctgggccccggtgcaggccgtcatcgacaggtacctggtgcgctacacctctgctgat
ggagacaccagggaggttccggtggggaaggagcagagcagcaccgtcctgacgggcctg
aggccrggcgtggagtacacggtccacgtgtgggcccagaagggggaccgggmgagcagg
aaggccgacaccaaggccccgacagacattgaccctccccaaaaccttcatccttctgct
gtaacccagtccggtggggtattgacctggacacccccctctgccgagatcgatggctat
attctgacctaccagttcccagacggcactgtcaaggaggtgcagcttggaagaggggac
cagaggtttgagttgcaaggccttgagcagggtgtcaccctgcctgtctccttggttgcc
tttaagggtgatcgccggagcaggagtgtatctacaaacctttccacagttggtgcccgt
tttccacacccttcggactgcagtcaagttcagcagaacagtaacgccgccagtggcctc
tacaccatctacctgcatggggatgccagccggtccctgcaggtgtactgtgacatggac
acagatggaggcggctggattgtcttccagaggaggaacaccgggcagctggatttcttc
aagcgctggcggacctacgtggaaggcttcggcgaccccatgaaggagttctggcttgga
cttgacaagctacacaacctcaccatgggcacgcccacccgctatgaggtgagagtggac
ttacagactgccaacgaatctgcctatgctgtgtacgactccttccaggtggcctccagc
aaggagcggtacaggctcacagtcgggaaatacagaggcacggcaggggacgcactcact
taccacaacggatggaagtttacaacctttgaccgagacaacgacatcgccctcagcaac
tgtgccctgacgcatcacggcggctggtggtacaagaactgccacttggccaaccccaat
ggcagatacggggagaccaagcacagtgagggggtgaactgggagccatggaagggacat
gaattctccattccttttgtggagttgaagatccgacctcacggctacagcggggagcat
gtcctgagcagaaagaagcgaatgctgggagaaaattcgagaacgttctga
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integrated database retrieval system