Bos indicus (zebu cattle): 109570846
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Entry
109570846 CDS
T04792
Name
(RefSeq) DEP domain-containing protein 5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109570846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109570846
Membrane trafficking [BR:
biu04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
109570846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IML1
DEPDC5_CTD
DEP
Motif
Other DBs
NCBI-GeneID:
109570846
NCBI-ProteinID:
XP_019832552
LinkDB
All DBs
Position
17:74122381..74180827
Genome browser
AA seq
1445 aa
AA seq
DB search
MWRLKKSLVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYI
FIQMSCEMWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSLDE
FPEINRASIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGF
PQGDNATSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILT
KQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRSAPHDSRLGDDYNIPHWINHSFYTSKSQ
LFCNSFTPRIKLAGKKPTCEKAKNGRDTSLGTPKESENALPIQVDYBAYDAQVFRLPGPS
RAQRLSTCRSVRERESHSRKSASSCDVSSSPSLPGRTLPTEEVRSQASDDSSLGRSANIL
VIPHPHLHQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHVRPGGYTP
QRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDLTH
SSAELLELAYHEAAGRHSTSRQPGDGTSFLSFAGTEELSVSLLRGSGXDVSPRTQNKDSP
EDSVSTSPDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEG
CYDLLPEADIDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPRAQKPSPAGPPPLSSS
PLYSRGLVSRNRPEEEDQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLC
PSHSDSEFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACV
TATKRITEGEAHCDIYGDRPRADEDEWQLLDGFIRFVEGLNRIRRRHRSDRMMRKGATMK
GLQMAGPIPTHSLESAGPPVGKKGTSALSALLEMEASQKCLGEQQAAAHGVKSSAPPAES
GGVAMTPTYVDSPRKDGAFFMEFVRSPRTASSAFYPQVSLDQTAAPVLDSSSLGVSTGQS
VDRGNSQTFGNLQSLGEQGFPSANSSDSGAQQLVASSLTSSSTLVEILEAMKHPSTGVQL
LPEQKGLSPSCFISAEVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLITHASGEAWRTFIY
GFYFYKIVMDRDPERVAVQQPTTWHTTAVDDFASFQRKWFEVAFVAEELLHSEIPAFLLP
WLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYY
HGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDP
LRAQLFIPLNISCLLKEGSEHLFDNGLVSQMGLARAALPAQGDPXVAGGACLTGVGGRKL
SRTGGLHLLLHAAGLEXGGSESRAGHGALCARLRRLSTXRAPVPQHRKAEQKEDEGPLVP
ALPQN
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgactaaagaaaagtttggtcagcacatgtgcctatatcactcagaaggtggaa
tttgctggcatcagggcacaggctggtgagctgtgggtcaagaatgagaaggtcatgtgt
ggttatatcagcgaagataccagggtggtgttccgttctacgtcrgctatggtttacata
tttattcagatgagctgtgaaatgtgggattttgatatttatggggatctgtattttgag
aaagctgtgaatggtttccttgctgatctctttaccaagtggaaggagaagaactgcagt
catgaagtgacagtggtcctgttttctaggactttttatgatgcgaaatctcttgatgaa
tttcctgaaataaaccgagcctcaattaggcaggatcacaaggggcgattctatgaagac
ttttacaaggtggtggtgcagaacgagaggagggaagagtggacctcactcctcgtgacc
atcaaaaagctcttcatccagtacccagtgctggtgcgactggaacaggcagagggcttt
ccccagggagacaatgctacctcagcacaaggaaactacctggaggccatcaacctgtcc
ttcaacgtgtttgacaagcactacatcaaccgcaactttgaccgaacygggcagatgtct
gtggtgatcacacccggggtgggcgtgttcgaggtggaccggctgctcatgatcctgacc
aagcagcggatgatagataacggaatcggtgtggacctggtgtgcatgggggagcagccg
ctgcaygctgtcccgttgttcaagctgcacaatcggagtgcccctcatgactcccgtctg
ggggatgactacaacatccctcactggataaaccacagtttctacacatccaaaagccag
ctcttttgtaatagtttcacaccacgaattaaactggcaggaaagaagcccacctgtgag
aaagcaaaaaatggccgtgatacatctctcgggacccccaaagaatctgagaatgccctt
cccatccaggtggattacratgcttacgatgcacaagtcttcaggctccctggcccctcc
cgggctcagcgcctcagcacctgcaggtctgtgcgagagcgggagagtcacagccggaag
agcgccagctcctgygacgtttcatccagcccttcgctgcccggccggacgctgcccacg
gaggaggtgaggagccaggcgtctgacgacagctcgctgggcaggagcgccaacatcctg
gtgatccctcacccccacctgcaccagtacgaagtcagcagctccctgggctacaccagc
actcgagacgtcctggagaacatgatggagccaccacagcgggattccagcgcaccgggc
aggttccacgtgggcagcgcagagtccatgctgcatgtccgccccggggggtacacgccc
cagcgggcactgattaacccctttgcrccctcacggatgcccatgaagctcacgtccaac
aggaggcgctggatgcacactttccccgtgggaccgtcgggagaggccattcagatccat
caccagacccgacagaatatggcagagctgcagggcagcgggcagagggacctgacccat
tcctccgcggagctgctggagctggcataccacgaggccgccggcaggcacagcacttcc
cgccagcccggcgacggcacgtccttcttgagcttcgctgggacggaggagctctcggtc
agcctgctccgtggcagtggtrcagatgtgagtcctcggacgcagaataaggattctcca
gaggacagtgtgtctacctccccagacccaattctgacgctgtctgctccccctgtagtg
ccaggcttctgttgcacagttggtgtggactggaagtcactcacgactcccgcgtgcctc
cccctcaccacggactacttccccgaccgccagggcctacagaatgactacacggagggc
tgctacgatctcctcccggaggctgacatcgacaggagggatgaggagggcgtgcagatg
acggcccagcaggtatttgaagagttcatctgccagcggctcatgcagggttaccagatc
atcgttcagccccgcgcacagaagcccagccctgctggcccaccgccactcagcagcagc
ccgctctacagccggggccttgtgtcccgaaaccgcccggaagaggaagaccagtactgg
ctgagcatgggcagaaccttccacaaagtcacactgaaagacaagatgatcacagtgacc
cgctaccttcccaagtacccgtacgagtccgcccagatccactacacctacagcctctgc
ccctcccactccgattcagagttcgtctcctgttgggtggaattctcgcatgagcgactg
gaggagtacaagtggaattacttagatcagtatatctgctctgccggctctgaggacttc
agcttaatcgagtccctgaagttctggaggacacgcttcctgctgctgccggcctgcgtc
accgccaccaagcgcatcacggagggagaggcgcactgcgacatctacggggaccggccg
cgggccgacgaggatgagtggcagctcctggacggcttcatccgcttcgtggagggcctg
aaccgcatccgccggcggcaccgctcggaccgcatgatgcggaaaggggccaccatgaaa
ggcttgcagatggccgggcccatccccacgcactctctcgagtcggctggccccccggtt
gggaagaagggaacctcagctctgtctgccctgctggagatggaggccagtcagaagtgc
ctgggagagcagcaggcagcggcacacggggtcaagagctccgccccgccagccgagagt
ggcggtgtagccatgactcccacctatgtggacagcccgcgaaaggacggggccttcttt
atggagtttgtccgcagcccgcgcacagcatcatccgccttctacccgcaggtgtctctg
gaccagacggccgccccggtgctggacagcagcagcttgggggtgagcacaggccagtcc
gtggacaggggcaacagccagaccttcgggaacttgcagagcttgggggaacagggcttc
ccctccgcaaactccagcgatagcggtgctcagcaactggtggccagctctctgacatct
tcctccaccctggtggagatcctggaggccatgaagcacccctcgacaggtgtccagctg
ctccctgagcagaagggcctctcgccaagctgcttcatcagcgcggaggtggtgcactgg
ctggtgaacaaygtggagggggtacagacgcaggccatggccatcgacatcatgcagaaa
atgctggaagagcagctcattacacacgcctctggtgaagcctggcggaccttcatctac
ggcttctatttctacaagatcgtgatggacagagatcctgagcgagtggctgtgcagcaa
cccaccacctggcacacgacggcagtggacgacttcgccagcttccagcgcaagtggttc
gaggtggccttcgtggcagaggagctcctgcactcggagatccccgccttcctgctgccc
tggctacccagccggccagcctcctacgccagcaggcacagctcctttagccgcagcttt
gggggccgcagccaggccgccgcgctcttggctgccactgtcccggagcagaggaccgtg
accctggacgtggacgtgaacaaccgcacggaccggctggagtggtgcagctgttactac
cacggcaacttctctctgaacgcggccttcgagatcaagctgcactggatggctgtgacy
gccgccgtgctctttgagatggtccaaggttggcaccgcaaggccacctcctgtggcttt
ttgttggtgccggttttggaggggccctttgctctgcccagttacctgtacggcgacccg
ctccgggcccagctgttcatcccactcaacatcagctgcctgctcaaggagggcagcgag
cacctgtttgacaatggccttgtttctcaaatggggctggccagagctgccttgccagct
cagggagaccctcrtgtggccgggggagcatgcctgactggcgtgggtggcaggaagctg
agccgtacgggaggcttgcacctgctgctccatgcagcagggctggagargggaggctcc
gaaagcagagcgggacatggtgcgctgtgtgcacggctgaggcgcctcagcaccyggagg
gctccagtcccacagcacaggaaggcagagcagaaggaggacgaggggcccctggtccca
gccctcccccagaactga
DBGET
integrated database retrieval system
