Bos indicus (zebu cattle): 109571089
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Entry
109571089 CDS
T04792
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu05014
Amyotrophic lateral sclerosis
biu05017
Spinocerebellar ataxia
biu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109571089 (ATXN2)
05017 Spinocerebellar ataxia
109571089 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
109571089 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109571089 (ATXN2)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109571089 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
109571089
NCBI-ProteinID:
XP_019832841
UniProt:
A0A6P5D3J1
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All DBs
Position
17:complement(57988636..58061134)
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AA seq
1049 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIM
ESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELTTNDEL
EALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLA
EEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHNINTRENKYIPPGQRNREVIS
WGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSP
KAQRHPRNHRVSAGRGSISSGLEFVSHTPPSEAAAPPTARTSPAGGTWSSVVSGVPRLSP
KTHRPRSPRQNSIGNTPSGPVLASPQAGIIPAEAVAMPVPAASPTPASPASNRAVTPSLE
AKDSRLQDQRQNSPAGNKENMKPSETSSSFSKAENKGISPIVSEHRKQIDDLKKFKNDFR
LQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISP
SVLSNTEHKRGPEVTSXGVQTSSPGCKQEKEDKEEKKDAAEQVRKSTLNPNAKEFNPRSF
SQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPM
TPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQ
QFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAM
YACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGS
HPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPAAQQT
VFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQS
ALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggttcatattcttacatcagttgttggatccaaatgtgaagtacaagtgaaa
aacggaggtatatatgaaggagtttttaaaacatacagtcctaagtgtgatctggtactt
gatgctgcacatgagaaaagtacagaatccagttcggggccaaaacgtgaagaaataatg
gagagtattttgttcaagtgttcagactttgttgtggtgcagtttaaagatatggactcc
agttatgcaagaagagatgcttttactgactctgctatcagtgctaaagtgaatggtgaa
cacaaagaaaaggacctggagccttgggatgcaggtgaactcactaccaatgacgaactg
gaagctttggaaaatgatgtttctaatggatgggatcccaatgatatgtttcgatataat
gaagaaaattatggtgtagtgtctacatacgatagcagtctgtcttcatatacggtgccc
ttagaaagggataactcagaagaatttttaaaacgagaagcaagggcaaaccagttagca
gaagaaattgaatcaagtgcccagtataaagcccgggtggccctggaaaatgatgatagg
agtgaagaagaaaaatacacagcagttcagagaaattccagtgaacgtgagggccacaac
ataaacactagggaaaataaatatattcctcctggacaaagaaatagagaagtcatatcc
tggggaagtgggcgtcagaattcaccacgtatgggccagcctggatcgggctccatgcca
tcaagatccacctctcacacttcagatttcaacccgaattctggttcagaccaaagagta
gttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttct
cgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccc
tccaggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttctcca
gctcctgtctctactatgcctaaacgcatgtcttcagaagggcctccaaggatgtcccca
aaggcccagcgacaccctcgaaatcacagagtttctgctgggaggggttccatttccagt
ggcctagaatttgtatcccataccccaccaagtgaagcagctgctcctccaacagcaagg
accagtcctgcagggggcacatggtcatccgtggtcagcggagttccaagattatcccct
aaaactcacagacccaggtctcccagacagaatagtattggaaatactcctagtgggcca
gttcttgcttctccccaagctggtattatcccagctgaagctgttgctatgcctgtacca
gctgcatctcctacacctgccagtcctgcatccaacagagctgttaccccatctcttgag
gctaaagattccaggcttcaagatcagaggcaaaactctcctgcagggaataaagaaaat
atgaagcccagtgagacatcatccagcttctcaaaagctgaaaataaaggtatatcacca
attgtttctgaacatagaaaacagattgatgatttaaagaaatttaagaatgattttagg
ttacagccaagttctacttctgaatctatggatcagctgctaaacaaaaatagagaggga
gaaaaatcaagagatttgatcaaagacaaaattgaaccaaatgctaaggattctttcatt
gaaaatagcagcaactgcaccagtggcagcagcaagccgagcagccccagcatttcccct
tcagtcctcagtaacacggagcacaagaggggacctgaggtcacatcccmaggggttcag
acttccagtccaggatgtaaacaagagaaagaagataaagaggagaagaaagacgcagct
gagcaagtgaggaaatcaacgttgaatcccaatgcaaaggagttcaaccctcgttccttt
tctcagccaaagccttctaccaccccaacttcgcctcgtcctcaagcacaacctagccca
tctatggtgggtcatcagcagccaactccagtttatactcagcctgtttgttttgcacca
aatatgatgtatccggtccctgtgagcccgggcgtgcaacctctgtatcctatacctatg
acgcccatgccagtcaatcaagccaagacatatagagcaggtaaagtaccaaatatgccc
caacaacggcaagaccaacaccatcagagtaccatgatgcacccagcctcagcagcaggc
ccaccaattgtggccaccccaccagcttattccacacagtatgtcgcctacagtcctcag
cagtttccaaatcagcctcttgttcagcatgtgccacattatcagtctcagcatcctcat
gtctatagtcctgtaatacagggtaatgctagaatgatggcaccaccaacacatgcccag
cctggtttagtgtcctcttcagcgactcagtacggggctcatgagcagacacatgcgatg
tatgcatgtcccaaattaccatacaacaaggagacaagcccttctttctactttgccatt
tccactggctcccttgctcagcagtatgcgcaccctaatgccaccctgcacccacatact
ccacatcctcagccttcagctacgcccaccggacagcagcaaagccagcatggtgggagc
catcctgcgcccagtcctgttcagcaccatcagcaccaggccgctcaggctctccatctg
gccagtccacagcagcagtctgccatttaccatgcggggcttgcgccaaccccaccttcc
atgacacctgcctccaatacacagtctccacagaatagtttcccagcagcacagcagacc
gtctttaccattcatccttctcatgttcagccggcttacaccaatccaccccacatggcc
catgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcg
ccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagt
gcactacagcccattccagtctcgacaacagcgcatttcccttatatgacgcacccttca
gtacaagcccaccaccaacagcagttgtaa
DBGET
integrated database retrieval system
