KEGG   Bos indicus (zebu cattle): 109571204
Entry
109571204         CDS       T04792                                 
Symbol
UBC
Name
(RefSeq) polyubiquitin-C
  KO
K08770  ubiquitin C
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03320  PPAR signaling pathway
biu04120  Ubiquitin mediated proteolysis
biu04137  Mitophagy - animal
biu04140  Autophagy - animal
biu05012  Parkinson disease
biu05022  Pathways of neurodegeneration - multiple diseases
biu05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109571204 (UBC)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109571204 (UBC)
   04137 Mitophagy - animal
    109571204 (UBC)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    109571204 (UBC)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    109571204 (UBC)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    109571204 (UBC)
   05022 Pathways of neurodegeneration - multiple diseases
    109571204 (UBC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:biu04121]
    109571204 (UBC)
Ubiquitin system [BR:biu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   109571204 (UBC)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 109571204
NCBI-ProteinID: XP_019833047
UniProt: A0A6P5D7Y2
LinkDB
Position
17:53717899..53721019
AA seq 690 aa
MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGVLSSPF
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctcactggtaaaaccatcactctggaggtggagcccagt
gacaccatcgagaaygtcaaggggaagatacaagaaaaagaaggcatccccccagaccag
cagaggctgatctttgccgggaaacagctggaagatggccgcaccctgtctgactacaac
atccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc
gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag
aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagaggctgatc
tttgccgggaaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagag
tccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttg
accggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcc
aagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaa
cagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcac
ctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagacc
atcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaagatccaagac
aaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaagat
ggccgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctccgc
ctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagaccatcactctggag
gtggagcccagtgacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatc
cccccagaccagcagaggctgatctttgccgggaaacagctggaagatgggcgcaccctg
tctgactacaacatccagaaagagtccactctgcacctggtcctccgcctcagaggtggg
atgcagatcttcgtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagt
gacaccatcgagaacgtcaaggccaagatccaagacaaagagggcatccccccagaccag
cagaggctgatctttgccggaaaacagctggaagatgggcgcaccctgtctgactacaac
atccagaaggagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc
gtgaagaccttgaccggcaagaccatcaccctggaggtggagcccagtgacaccatcgag
aacgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagaggctgatc
tttgccgggaaacagctggaagatggccgcaccctgtctgactacaacatccagaaagag
tccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttg
accggcaagaccatcactctggaggtggagcccagtgacaccatcgagaacgtcaaggcc
aagatccaagacaaagagggcatccccccagaccagcagaggctgatctttgccgggaaa
cagctggaagatggccgcaccctgtctgactacaacatccagaaagagtccactctgcac
ctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccttgaccggcaagacc
atcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggccaagatccaagac
aaagagggcatccccccagaccagcagaggctgatctttgccgggaaacagctggaagat
ggccgcaccctgtctgactacaacatccagaaagagtccactctgcacttggtcctgcgc
ttaaggggaggtgttttaagttctcccttttaa

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