Bos indicus (zebu cattle): 109571236
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Entry
109571236 CDS
T04792
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109571236 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109571236 (SMARCA5)
03036 Chromosome and associated proteins [BR:
biu03036
]
109571236 (SMARCA5)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
109571236 (SMARCA5)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
109571236 (SMARCA5)
RSF complex
109571236 (SMARCA5)
WICH complex
109571236 (SMARCA5)
B-WICH complex
109571236 (SMARCA5)
NORC complex
109571236 (SMARCA5)
BRF complex
109571236 (SMARCA5)
NuRF complex (fruit fly)
109571236 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
109571236
NCBI-ProteinID:
XP_019833105
UniProt:
A0A6P5D5M2
LinkDB
All DBs
Position
17:complement(15320772..15359602)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAADPPPPPPPESAPSKPXXXXAGSGSNSSNKGGPEGVAAQGAPSVGNAGPTDSEMEE
VFDNASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgaccctccgccacccccgcctcccgagagcgcgccttcgaagccn
nnnnnnnnnnnngccggcagcgggagcaacagcagcaacaaaggcggccccgagggcgtc
gcagcccagggggctccctccgtgggcaacgccggccccacggactcggagatggaggaa
gtatttgacaatgcatctcctggaaagcaaaaagaaatccaagaaccagatcccacctat
gaagaaaaaatgcaaactgaccgggcaaatagatttgaatatttattaaagcagacagaa
ctgtttgcacatttcattcagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccagggcgcccacgaataaaaaaggatgagaaacagaacttgctctcagttggcgac
tatcgacaccgaagaacagagcaagaagaagatgaagaattattaacagaaagctccaaa
gcaaccaatgtttgcactcggtttgaagactctccatcgtatgtaaaatggggtaaactg
agagattatcaagtccgaggattaaattggctcatttctttgtatgagaacggcatcaat
ggtatccttgcagatgaaatgggcctgggaaagacacttcaaacaatttctcttcttggg
tacatgaaacactatagaaacattcctggtcctcatatggttttggtgcctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgttta
ataggggataaagaacaaagggctgcttttgtcagagatgttttgttaccaggagaatgg
gatgtatgtgtaacttcttatgaaatgcttattaaagagaagtctgtttttaaaaaattt
aactggaggtacttagttattgatgaagctcacaggatcaaaaatgaaaaatccaagttg
tcagaaatagtgagggaattcaagactacaaatcgactattattaactggaacacctctt
caaaacaacttgcatgaactttggtcacttcttaattttttgttaccagatgtctttaat
tcagctgatgactttgattcctggtttgatacaaataattgccttggggatcaaaagtta
gttgagagacttcatatggttttgcgtccattcctcctccgtcgaattaaggctgatgtt
gaaaagagtttacctccaaagaaggaagtaaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatactcggatattgatgaaggatatagatatactgaactctgcagggaag
atggacaaaatgcggctattgaacattctgatgcagttgaggaagtgctgtaaccacccc
tatctctttgatggggctgaaccgggtcctccttacacaacggacatgcatctggttacc
aacagtggcaaaatggtggtgttagacaagctgctccctaaattaaaagaacaaggttcg
cgagtactgatcttcagtcagatgaccagggtattggatattttggaagattattgcatg
tggaggaattatgagtactgtaggttggatggacagacaccccatgatgagagacaagag
tccatcaatgcgtacaatgaaccaaacagcacaaaatttgtttttatgttaagcacacga
gctggtggtcttggcatcaatcttgctactgctgatgttgtgattttgtatgactcagat
tggaatccccaagtagatcttcaggctatggaccgagcacatagaattggacagaccaag
acagtcagagtgtttcgcttcataaccgataacactgtagaagaaagaatagtggagcgt
gctgagatgaaactcagactggattcaatcgtcatccagcaggggagacttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgataaggcatggggcaacacac
gtgtttgcctcaaaggagagtgagattactgatgaggatattgatgggattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaatttcacaatggatacagagtcgagtgtttataactttgaaggagaagattataga
gaaaaacaaaagattgcattcacagagtggattgagcctcctaaacgagaaagaaaagcc
aactatgctgtcgatgcctatttcagggaagctcttcgagtcagtgaacctaaagcaccc
aaggctcctcgacctccaaagcaacccaatgttcaggatttccagttctttcctccacgt
ctatttgaattattggaaaaagaaattctatattacagaaaaacaattggttacaaggtc
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaggaagaacagctgaaaatt
gatgaagccgagccccttaatgatgaagagttagaggagaaagagaagcttctgacgcag
ggatttaccaattggaataagagagattttaaccagtttatcaaagctaatgagaagtgg
ggtcgtgatgatattgaaaatatagcaagagaagtagaaggaaaaactccagaagaagtc
attgaatactcagctgtgttctgggaaagatgcaatgagctgcaggacatagaaaagatt
atggctcagattgaaagaggagaggcaagaattcagagaagaattagtatcaaaaaagca
cttgacacgaagattggacggtacaaagcaccttttcatcagctgagaatatcttatggt
actaacaaagggaaaaactacactgaggaggaagaccgcttcctgatctgtatgcttcac
aagcttggattcgacaaggaaaacgtgtatgatgagctgcggcagtgcattcgcaactct
cctcagttcagattcgactggtttctaaagtccagaactgcaatggaactccagaggagg
tgtaacaccttaattaccttgattgaaagagaaaatatggaactagaagaaaaggagaag
gcagagaagaagaaaagaggacccaagccttcaacacagaaacgtaaaatggacggagca
cctgatggccgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
