Bos indicus (zebu cattle): 109571607
Help
Entry
109571607 CDS
T04792
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
biu04040
]
109571607 (PKD1L2)
04091 Lectins [BR:
biu04091
]
109571607 (PKD1L2)
Ion channels [BR:
biu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109571607 (PKD1L2)
Lectins [BR:
biu04091
]
C-Type lectins
Others
109571607 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Lectin_C
Ion_trans
REJ
GPS
Motif
Other DBs
NCBI-GeneID:
109571607
NCBI-ProteinID:
XP_019833686
UniProt:
A0A6P5D5Y1
LinkDB
All DBs
Position
18:complement(6829270..6954659)
Genome browser
AA seq
2414 aa
AA seq
DB search
MSTLAVVLLGLALEFGAITAKPDDGSFCSKNQVAFRDACYEFVSLSRTFYGAQSWCERQG
GHLVFIRDEATQKFLQKHLSRDREWWIGLTGSSARNGTAEGPRIWMDXSCVSYSHWRRXQ
DASAPKACSYIGRDPSFRWVASDNCTQEFAFICEFGVGQSLACEGLNATLHCGSGEVIQI
QDAFYGRRTPHYCIQGAGHPSDLEEECSWVSAKDEVAGQCQGLQACQVAADGTYXGDLCP
GRGSYLWVQYLCREGLQLMVSNESFIFDNITISLTWLLSPYIGNLSCIINMGDGHIFDPY
YPPSLSSRVTHQFTAPGDFTVFAECSTSEWHVMAQKQVTIQDNTERLRVTGCSGLTTSGA
SPLCWAVFGDPLWIQVELDGGTGVTYTVLLGNTTLAEFTTQRGPLPYNLTLDRGVQRXTG
PGMHHLEIRATNDSTNSAPSRNITVRFVEALSGLQASWASDHLELGQDLLVNVSVAHGIP
ESLTFEVAGLBTTFSYXKENLRGSFGTYHVAVPLEGTFLVTVLVRDAFSNLSLEIGSITV
TAPSSLQEPPRTKVQRKNRDKGKVELYVEPGQYLDPFTTVTLGWPDRDKDLRFQWACGRC
WXQWSDCVERQLLRTDQRELVVPPSCLPPSBSAVTLRLTVWRGPELENLGEQCLYVSAPL
ELRPRVSCEENCGPVDASRDVMLRVTMGDRSAAAMFSWYLDDTPLEKAEPLPEACRLXGF
WPRSSILLQSNTSTLLLNSSFLRICGQAARIRVTAVTGCAYGEDTYVVSSLPPLEVPTCT
IAPEEGTILTSFAIFCNVSTALGPLEYCFCLESGSCLYCGPEPALPSVYLPLGKENDDFM
LTVVISVSNHVGGRQQTQAVVKVAPGHTCVEEEAFQAVVWDNVTAILQGGRGPERLFQLA
RAVSSVLDQGPGSRQLPRVDTRRKVRERILGSLSVVNATMGDMQRLRGLAEVLKEVTQXS
EELTPLAQREAGWALQHASEGLLAVSAEAHPEDRRRQTATRDLLQAVGNVLEASLRHRSE
EPAQANGSQMATVSRLLEAAEHVQAALLLGRLPGGLPAMVTTPSISVYTNRIQPWSWRGS
SVHVAAASSATFTLPTAPSLGSMEDYREPVDIRMMSFPKSPFPAGGHFNVSGTVGGLSLT
SPSGQLIPVKNLSEYIEILLPRLSETHGEPXVLNLSRPEALRVNLTSGSAALGIQLHWRP
DAPLTLSLGYGYHPNETSYDAQAHLPPTAASDELSMWILSPEDLHFGEGXYYLTIILKSD
LEPAPGRDLTVGITTFLSHCVFWDEVQGTWDNSGCQVGPRTTLSQTHCLCNHLTFFGSTL
LVMPNAVDVRQTAELFATFADNPVVVTTVSCLCVAYLLVLIWARRKDAQDQAKVKVTALE
DNDPLAQYHYLVTIYTGHRRGAATSSKVTVTLYGLDGESEPHHLLDPDIPVFERGGVDVF
LLSTLFPLGELRSLRLWHDNSGDQPSWYVSRVLVHDLAMDRKWYFLCNSWLSIDVGDCVL
DKVFPVATEEDRKQFSHLFFMKTSTGFQDGHIWYSIFSSSAWSNFTRVQRVSCCFSLLLC
TMLTSIMFWGVPKDPAEQKMDLGQIEFTWQEVMIGLESSLLMFPINLLIVQIFRNTRPWV
AKEQNAGKWDGRRLSLAPSPQPXEDGLLTPEAVTKDLWRLVSSLFKALKVPPPLLGWDST
NSMNINQLLALMEDVICRQIKAGQVFSEEVSQTGAPLTLTLGSVQVKENMQRSRPKVGPS
DAWKNSAFRQCLYLQLEHLEQELLLLEPRCSSQGQNHTRALGQLQTLKGCLVAQAGTLPP
AHSSSLQASKLPRGLPWWCVLVGWLLVVVTSGVAAFFTMLYGLHYGRTSSLKWLISMAVS
FVESVFVTQPLKVLGFAAFFALVLKRVEDEEEPVVPLPGCLSSPDPSALFRARRNSRRDT
YQPPLASDIEKMKTMHLKEQKAFALIREILGRQPRLPMSDLPTCWFLWLHLPTCFSSPGF
VTDGNAKLVGSAQIRQVRVQESSCLLAPQLQAFLDRCHAPYSLDVEDLSDYGEGWNASVL
NNSNDFSQAWRYQSQSQRRGYPLWGKLTVYRGGGYVVSLGTDRQSASRTLQYLFDNTWLD
SLTRAVFVEFTVYNANVNLFCIVTLTLETSALGTFFAHAHLQSLRLYPFTDGWHPFVVAA
EIAYFLFLLYYMAVQGELLRKQKWCYFHSKWNVLELAIILASWSALAVFVKRTVLVERDL
QRYRKHREEGISFSXTAAADAALGYILAFLVLLSTVKLWHLFRLNPKMNMITSALRRAWG
DISGFIVVILIMLLAYSIASNLIFGWKLRSYKTLFDAAETMISLQLGIFNYEEVLDYSPL
LGSFLIGSCIIFVTFVVLNLFISVILVAFNEEQKYYQLSEEGEIVDLLLMKILSFLGIKC
KRQEPGSSSEQPVV
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccttggccgtggtactcctggggcttgctctggagtttggggccattactgct
aagccagatgacggcagcttttgctctaagaaccaagtggctttcagagatgcttgctac
gaatttgtgtctctcagccgcaccttctacggtgcccagagctggtgcgagaggcaagga
ggtcatctggtcttcattcgtgatgaagccacccagaaatttctgcagaagcacctctcc
cgggacagggaatggtggattggactcacagggagctcagctcggaatggaaccgcagaa
gggcccaggatctggatggacrcctcatgtgtgagctacagccactggcgccgarggcag
gatgcttctgcacccaaagcctgcagctacatcgggagagacccttcctttaggtgggtg
gcctcggacaactgcacgcaggagttcgccttcatctgcgagtttggtgtcggccagagt
ctggcctgcgagggcctcaatgccaccctgcactgtggctcgggggaggtcatccagatc
caggacgctttctaygggcgccggacgccccattactgcatccagggcgccgggcacccc
tcagacctggaggaggaatgcagctgggtcagcgccaaggatgaagtggcaggccagtgc
caggggctgcaggcctgccaggtggcagcagatgggacctactwtggagacctgtgcccc
ggccgaggcagctacctgtgggtgcagtacctgtgccgggaaggcctgcagttratggtg
tccaatgagagtttcatctttgacaacatcaccatctcccttacatggctcctttctccc
tacatcggaaacctgtcctgtataattaatatgggagatggccacattttcgatccctac
tacccacccagtctgtccagcagggtgacccaccaattcacagcccccggggatttcacc
gtgtttgctgagtgttcaaccagcgagtggcatgtgatggctcagaagcaagtgacgatt
caagacaacacggagaggctccgygtgactgggtgttctggcctgaccacgtcaggagcc
agccctctctgctgggcagtcttcggggaccctctgtggattcaggtggagcttgatgga
ggaacaggggtgacttacaccgtgctgctaggtaacacaaccctggctgagttcaccacg
cagaggggcccgctcccctacaatctgaccctggacagaggagtccagcgccraacgggc
ccagggatgcaccacctggagattcgagccaccaacgacagcaccaactccgccccctcc
agaaacatcaccgtccgcttcgtggaggctctgtcggggctgcaggcttcctgggcttct
gaccacttggagcttgggcaggacctattagtcaatgtctcggtggctcacggcatcccg
gagagtttgacctttgaggtggcaggactcratacaaccttctcctatragaaagagaac
ctcagagggtcatttgggacttaccatgtggcggttcctcttgaaggcacctttctggtc
actgtactggtgagggacgccttctcaaacttgagtttggaaattggaagcatcactgtc
acagctccttccagtctccaagaaccaccccgaacaaaggtccagagaaagaatagagac
aaagggaaagtggagctgtacgtggaacctggtcagtacttggatcctttcaccacagtg
acyctgggctggccggacagggataaggacttacgcttccagtgggcatgtgggcgctgc
tgggsccagtggagtgactgtgttgagaggcagctgctccgcacagaccagagggagctg
gtggttccaccgtcctgcctgccgccctcrractctgctgttaccctgcgcctgacagtc
tggagaggcccggagctggagaacctgggggagcagtgcctctatgtgtcygcccccctg
gaactcaggccgcgagtcagctgtgaggagaactgcgggccagtggatgccagcagggac
gttatgctgagggtcaccatgggggacaggtctgcagcagccatgttcagctggtatttg
gatgacaccccactggagaaggccgagcccctccctgaggcctgcagactcsgaggattc
tggccgcgttcttcaatcctccttcagagcaacacctccaccctgctgctcaacagctcc
ttcctgaggatctgcggccaggccgcccggatcagagtcacagcagtgaccgggtgtgcc
tatggggaggacacctatgtggtcagctccctgcctcccctggaggtgcccacctgcacc
attgccccagaggaggggaccatcctgacgagcttcgccatcttctgcaatgtctccact
gccctgggccccctggartactgcttctgcctggagtcaggttcctgtctatactgtggc
cctgaacctgccctcccatcagtttacctgccacttggaaaagaaaacgatgacttcatg
ttgacagtggtcatttctgtctccaatcatgtggggggcagacagcagacccaggcagtg
gttaaggtggcacctggacacacctgtgtggaggaggaagcattccaggccgtggtgtgg
gacaatgtcaccgccattctgcagggcgggcgtggccctgagcggctcttccagctggcc
agggccgtgtcatccgtactggaccaggggccgggctccaggcagctgccgagagtggac
accagacggaaggtcagagagcgtatcctggggtcactgtctgtggtcaatgccaccatg
ggggacatgcagaggctgcgggggctggctgaggtgctgaaagaggtgacccagcrcagt
gaggagctcacgcccttggcccagcgggaggccggctgggctctgcagcacgccagcgag
ggcctgctggcagtgagtgccgaggcccaccctgaggaccggaggcgccagacggccacc
agggacctgctccaggctgtgggcaatgtgctggaagcttccctgaggcacaggtctgaa
gagcctgcacaggccaacggcagccagatggccacagtgtcccggctgctggaagctgca
gagcatgtgcaggctgccctcctgctggggagactgcccgggggccttccggccatggtg
accactccctccatctctgtgtacacaaacagaatacagccctggagttggcgaggctcc
tccgtacatgttgctgccgccagctctgcgaccttcaccctgcccactgccccctccctt
ggctccatggaggactatcgggagcctgtggacataaggatgatgagcttccccaagagc
ccctttccagccggaggtcacttcaatgtcagcggaactgtgggtggcctctctctgacc
agtcctagtggacagctcatccctgtgaagaatctgtcggagtatatcgagatcctgctg
cctcggctttcagagacacacggtgagccarccgtgctgaacctgagcagacctgaagct
ctgcgggtgaacctgacgtcaggcagcgcggctttggggatccagctgcactggagacct
gacgccccactcacgctcagcctgggttacggctaccaccccaatgagaccagctacgat
gcccaggctcacctcccgcccacagctgcttcagatgagctctccatgtggatcctgagc
ccagaggacctgcattttggagaaggcrtctactatctgactattatcctcaagtctgac
ctggagccagctccaggcagggacctcacagtcggcatcaccaccttcctgtcccattgt
gttttctgggatgaggtccagggcacttgggacaactctgggtgccaggtggggccgcgg
accaccctctcgcagacccactgcctctgcaaccatctcaccttctttgggagcacactc
ctggtgatgcccaacgccgtggatgtccgccagactgctgagctctttgccaccttygcg
gacaaccctgtggttgtgaccaccgtgagctgcctctgcgtggcctacctcctggtgctg
atctgggcgaggaggaaggatgctcaggatcaagccaaggtaaaggtcacggcgctggag
gacaacgaccccttggctcagtaccactacctggtgacaatctacactggacaccggagg
ggggcagccacctcctcaaaggtgactgtcaccctatatggcctggatggagagagtgag
ccccaccacctgttggaccccgacatcccrgtttttgagcgagggggagtggatgtcttc
ttgctctccaccctgtttcccctgggggagctgaggagcctgcgactgtggcatgacaac
tcaggggatcagccatcttggtatgtaagccgggtgctggtgcatgacctggcaatggac
cggaagtggtacttcctctgcaactcatggctatccatcgatgtcggagactgtgtcctt
gacaaggtatttccagtggccacagaggaggacaggaaacaattcagccacctgtttttc
atgaagacctccacaggcttccaggacggccacatttggtactccatcttcagcagctca
gcttggagcaacttcacacgtgtccagagggtgtcctgctgcttctcactgctcctctgc
accatgctgaccagcatcatgttctggggtgtccccaaggacccagctgagcaaaagatg
gacttgggtcaaatcgagttcacttggcaggaagtgatgattgggctggagagctcactc
ctcatgttccccatcaacctcctgatcgttcagatctttcggaatacccgtccttgggtg
gctaaggagcagaacgctgggaaatgggatgggaggcgcctcagcctggcaccctcacca
cagcccayggaggatggccttctgacgcctgaagcagtgaccaaggatttgtggagactt
gtcagctccctgttcaaagctctgaaggtgccaccccctctcttgggctgggactccacg
aactcaatgaacatcaaccagctgctggccttgatggaagatgtcatctgtcgacagatc
aaagcagggcaggtcttctcggaggaagtcagccagacaggggcccctttaacactcact
cttggatcagtacaagtaaaagaaaacatgcaacgctccaggcccaaggtgggcccaagt
gatgcctggaagaacagtgccttccggcagtgtctctatcttcagctggagcacctggag
caagagctgctgctgctggagccccggtgctcctcccagggtcagaaccacaccagggca
ctagggcagctacagaccctgaagggctgtctggtggcacaggctggaaccctgccccca
gcacactccagttccctgcaggcaagcaagctccctcgaggcctgccctggtggtgtgtc
ctggtgggctggctcctggtggtagtcacaagtggggtggcagccttcttcaccatgctc
tacggcttgcactacgggcggaccagctccctcaagtggctcatctccatggccgtctcc
ttcgtggagagcgtgtttgtcacccagccactgaaggtgctggggttcgcagctttcttt
gctctggtgttgaagcgagtggaggatgaggaggagcctgtggtccccctcccgggatgt
ctctccagcccagacccctctgccttgttccgagcacgaagaaacagcagaagggatacc
taccagccgcctctggcctctgacattgagaagatgaaaaccatgcacctcaaggagcag
aaagcatttgccttaatcagagaaatcttgggtaggcagccaagattacctatgagtgac
cttcccacttgctggttcttatggctacatttacccacgtgtttctcatccccaggcttt
gtcactgatgggaatgccaagctggttggcagtgcccagattcgccaagtgagggtccag
gagagctcctgccttcttgccccgcagctgcaggctttccttgacaggtgccatgcacca
tattccctggatgtggaagacctgtcagactatggggaaggctggaatgcctccgtcctc
aacaacagcaatgacttctcccaggcttggcggtaccagagccagagccagcgccgaggg
tatcccctctggggcaaactyaccgtgtaccggggaggaggttacgtggtctccttgggg
actgatcgccaaagtgcatcaagaaccctccagtatctctttgacaacacctggctggac
agcttgaccagagccgtgtttgtggagttcacggtctacaacgctaacgtcaacctgttc
tgcattgtcactctgaccctggagaccagcgcccttggaaccttctttgcacatgcgcac
ctgcagagcctgcgcctgtacccctttactgacggctggcaccccttcgtggtagccgcg
gagatcgcctacttcctgttcctcctctactacatggctgtgcagggcgagctcctgagg
aagcaaaagtggtgctacttccacagcaagtggaacgttctggagctggccatcatcctg
gccagctggagtgccctggcggtgtttgtgaagaggactgtcctggttgagcgtgacctc
cagcgctaccgaaaacacagggaagaagggatcagcttcagcragactgcagcagccgac
gctgcccttggctacatcctcgccttcctggtactcctatccacagtgaagctttggcat
ctgttcaggctgaaccccaaaatgaacatgatcacgtcagctctgcgtcgtgcctggggg
gacatttcaggctttatcgttgtcatccttatcatgctcctggcttactccattgcatca
aacttaatctttggttggaaactccgttcctacaaaactctctttgatgcggcagaaaca
atgatcagccttcagctgggaatcttcaactatgaggaggtcctggactacagcccattg
ctcggctccttcctaattgggtcctgcatcattttcgtgacatttgtggtgctgaatctg
tttatctctgtcatcctggtggcgttcaatgaagagcaaaaatattatcagctgtcggag
gaaggagagatcgtcgatttgctactgatgaagatactcagttttctgggcattaaatgt
aaaagacaggagcctggaagcagcagtgagcagcctgttgtctga
DBGET
integrated database retrieval system
