Bos indicus (zebu cattle): 109571722
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Entry
109571722 CDS
T04792
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109571722 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109571722 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
biu03019
]
109571722 (SUPT5H)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109571722 (SUPT5H)
RNA polymerase I system
109571722 (SUPT5H)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
109571722 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
KOW1_SPT5
GPKOW_C
DUF3912
CDC45
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
109571722
NCBI-ProteinID:
XP_019833804
UniProt:
A0A6P5D8Q9
LinkDB
All DBs
Position
18:48637360..48663461
Genome browser
AA seq
1098 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEIMLKPPNPHRFLQAPALHLPLLTLSAHFFAA
SNIDNVVLDEDRSGARRLQNLWRTSEKRLGEYYMKNTQVICGETVYGGSDELSDDITQQQ
LLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEA
YKQTHVKQAIEGVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDD
IAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLG
GDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVT
ESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELR
KYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVD
VGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDS
EQNNIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGS
KPRDVTNFTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQT
VRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTP
MYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTP
SRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQ
FSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVG
YSPMTPGAPSPGGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTG
GMCSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDL
DEQLKILNLRFLGKLLEA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaggagcggcggagtgcagcgggcagtgagaaggaggaa
gagcccgaggaggaagaggaggaggaagaggaggaagagtatgatgaggaagaggaggag
gaagatgacgaccggccccccaagaaaccccgccacggcggcttcattctggatgaggct
gatgtggacgatgagtacgaggatgagatcatgcttaaacccccaaacccccaccgcttt
ctccaggcccccgctcttcatctccccttactcaccctgtctgcccatttctttgcagct
tccaacatcgacaatgttgtcctggatgaagaccggtctggggctcgccgcctgcaaaac
ctctggaggaccagcgagaagagactgggcgagtattacatgaagaatacgcaagtcatc
tgtggagagacggtgtatggagggtctgatgagctctcggatgacatcacccagcagcag
ctgctcccaggagtcaaggatcccaatctgtggactgtcaaatgtaagattggggaggaa
cgggccacagccatttccttgatgcgcaagttcattgcctaccagttcacagacacgccc
ctgcagatcaaatcggtagtggcaccggaacacgtgaagggttacatctacgtggaggcc
tacaagcagacccatgtgaagcaggccatcgagggtgtgggcaacctgcggcttggctac
tggaaccagcagatggtgcctatcaaggagatgacggatgtgcttaaagtggtgaaggag
gtggccaacctgaaacccaaatcctgggtccgcctcaagcggggcatctacaaggatgac
atcgctcaggtggattacgtggagcccagtcaaaacaccatttccctgaagatgatccca
cgcatcgactacgaccgcatcaaggcccgcatgagcttgaaagactggtttgccaaaagg
aagaagtttaagcggcccccacagaggctgtttgatgcagaaaagatcagatccctgggg
ggtgaygttgcctcygacggtgacttcctcatcttcgaggggaaccgttacagccggaag
ggctttctgttcaagagctttgccatgtctgctgtgatcacagagggtgtgaagcccaca
ctgtctgagctggagaagtttgaggaccagccagagggcatcgacctggaggtggtgact
gaaagcacagggaaggagcgggagcacaacttccagcccggggacaacgtggaggtgtgt
gagggygagctcatcaacctgcagggcaagatcctcagcgtggacggcaacaagatcacc
atcatgcccaagcacgaggacctcaaggacatgctggagttcccggcccaggaacttcgc
aagtacttcaagatgggggaccacgtgaaggtgatcgctggtcggtttgagggcgacaca
ggcctcatcgtgcgggtggaggagaacttcgtcatcctcttctctgacctcaccatgcac
gagctgaaggtgctcccccgggacctgcagctctgctcggagacggcatcaggtgtggat
gttgggggccagcacgaatggggggagctggtgcagctggacccccagaccgtgggcgtc
atcgtgcgactrgagcgggagaccttccaggtgctgaacatgtatgggaaggtggtgact
gtcaggcaccaggctgtgacccggaagaaagacaaccgctttgccgtggccctggactca
gaacagaataatatccacgtgaaagacatcgtcaaggtcattgacggcccccactcgggc
cgggaaggcgagattcgccatctcttccgcagcttcgccttcctgcactgcaagaaactg
gtggagaacggcggcatgtttgtctgcaagacccgccacctggtgctggcagggggctcg
aagcctcgtgatgtgaccaacttcacagtaggaggcttcgcccctatgagcccccggatc
agcagccctatgcaccccagtgctggaggtcagcgcggtggctttggcagcccaggtggc
ggtggtggtggcatgagcagaggccgagggcggagagacaacgagctcatyggccagact
gtgcgcatctcccaggggccctacaaaggctacattggtgtggtgaaggacgccacggag
tccactgcccgcgtggagctgcactcyacctgccagaccatctcagtggaccgccagcgc
ctcaccactgtgggctcacggcgcccaggcggcatggcctcaacctacgggcggacaccc
atgtatggctcccagacgcccatgtacggctctggctcccgcacacccatgtacggctct
cagacgcccctccaggatggcagccgcaccccgcattatggctctcagacrcccctgcat
gatggcagccgcactcctgcccagagtggggcctgggacccaaacaaccccaatacaccg
tcacgggctgaggaagaatatgagtatgcctttgatgatgagcctaccccatccccacag
gcctacgggggcacccccaacccccaaacacctggctacccagacccctcgtccccgcag
gtcaacccacagtacaacccacagactccagggacaccagccatgtacaacacagaccag
ttctccccctatgcagccccctccccgcaaggctcctaccagcccagccccagccctcag
agctaccaccaggtggcgccaagtccagcaggctaccagaatacccactccccagccagc
taccaccccacaccctcgccaatggcatatcaggccagccccagcccaagccctgttggc
tacagtccgatgacacctggagctccttccccaggtggctacaacccrcacacgccgggc
tcaggcattgaacagaactccagygactgggtgaccactgacatccaggtgaaggtgcgg
gacacctacctggatacacaggtggtggggcagacgggtgtcatccgcagtgtcacggga
ggcatgtgctctgtgtacctgaaggacagtgagaaggttgtcagcatctctagtgaacac
ctggagcccatcacccccaccaagaacaacaaggtgaaggtgatcctgggtgaggaccgg
gaagccacaggtgtcctgctgagcatcgatggtgaggatggcattgtccgcatggacctt
gacgaacagctcaagatcctcaacctccgcttcctggggaagctcctggaggcataa
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integrated database retrieval system
