Bos indicus (zebu cattle): 109571789
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Entry
109571789 CDS
T04792
Symbol
POLD1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03030
DNA replication
biu03410
Base excision repair
biu03420
Nucleotide excision repair
biu03430
Mismatch repair
biu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109571789 (POLD1)
03410 Base excision repair
109571789 (POLD1)
03420 Nucleotide excision repair
109571789 (POLD1)
03430 Mismatch repair
109571789 (POLD1)
03440 Homologous recombination
109571789 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
biu03032
]
109571789 (POLD1)
03400 DNA repair and recombination proteins [BR:
biu03400
]
109571789 (POLD1)
Enzymes [BR:
biu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109571789 (POLD1)
DNA replication proteins [BR:
biu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109571789 (POLD1)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109571789 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
109571789 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
109571789
NCBI-ProteinID:
XP_019833868
LinkDB
All DBs
Position
18:56508158..56529412
Genome browser
AA seq
1029 aa
AA seq
DB search
MDGKRRPGPGPGVPPKRARGGLWDEDEAYRPSQFEEELALMEEMEAERRLQEQEEEELQS
ALEAADGQFSPTAIDARWLRPPPPALDPQMEPLIFQQLEIDHYVAPARPLPGAPPPSQDS
VPILRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSELQRELSAAISRXXRGGKE
LTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRLAGLGTPSF
APYEANVDFEIRFMVDTDIVGCNWLELPAGKYILRPEGKATLCQLEADVLWSDVISHPPE
GEWQRIAPLRVLSFDIECAGRKGLSPGPGVLPPSFPTSVMGPSPILRLALTLRPCAPILG
AKVQSYYSEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVPGFPLLGRVI
GLRSNIRESSFQSRQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQ
KEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTGVPLGY
LLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIATLDFSS
LYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKASVRKGLLPQILENLLS
ARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGRLPCLEISQSVTGFGR
QMIEKTKQLVETKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGH
FPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVANLVT
ASLRRLLIDRDPSGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELAE
RMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAKP
LLRIFEPILGEGRAEAVLLRMGVGVGGPRGSPAHSRDCPIFYMRKKVRKDLEDQERLLRR
FGPPGPEAW
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaagcggcgaccaggcccggggcctggggtgcccccaaagcgggcccgtggg
ggcctctgggatgaggatgaggcataccggccctcgcagttcgaggaggagctggcgctg
atggaggagatggaagcagagcgcaggctgcaggagcaggaggaggaggagctgcagtcg
gccctggaggcrgcggacgggcaattctccccaacggccatagatgcccgctggcttcgg
ccccccccgcccgccttggacccccagatggagcctctcatcttccagcagttggagatc
gaccattacgtggccccagcgcggcccctgcctggggcgcccccgccatcccaggactca
gttcccatcctccgcgccttcggggtcaccgacgagggggtctccgtctgctgccacatc
catggctttgcaccctacttctacaccccagcgccccctggttttggacctgagcacctg
agcgagctgcagcgggagctgagtgcagccatcagccgggnnnagcgcgggggcaaggag
ctcaccgggccggccgtgctggcggtagagctgtgctcccgggagagcatgttcgggtac
catgggcacggcccctccccgtttctgcgtatcaccttggcactgccccgcctcatggca
cctgcccgccgcctcctggagcagggcatccgcctggccggcctcggcacccccagcttt
gcgccctacgaggccaacgttgactttgagatccggttcatggtggacacggacatcgtg
ggctgcaactggctggagctcccagccgggaaatacatcctgaggccggaggggaaggcc
actctgtgtcagctggaggccgacgtgctgtggtcagacgtgatcagccacccgccggaa
ggagagtggcagcgaatcgcccctctgcgcgtgctcagcttcgacatcgagtgcgctggt
cgcaaaggtttgtccccggggcctggagtcctccctccctctttccctacatcagtgatg
ggcccgtctcccatcctgcgcctggcgctcaccctgcggccctgcgcccccatcctgggc
gccaaggtgcagagctactattccgargaggacctgctccaggcctggtcgaccttcatc
cgcatcatggatcccgatgtgatcaccggctacaatatccagaactttgaccttccctac
ctcatctcccgggcccagaccctcaaggtgccaggcttccccttgctgggccgtgtgatt
ggcctccgctccaacatccgggagtcgtccttccagtccaggcagactggccggcgggac
agcaaggtggtcagcatggtgggccgcgtgcagatggacatgctgcaggtgctgctgcgg
gagtacaagctccggtcctacacgctcaatgccgtgagcttccacttcctgggcgagcag
aaggaggacgtgcagcacagcatcatcacagacctgcagaacggtaacgaccagacgcgc
cgccgcctggccgtgtactgcctcaaggacgccttcctgcccctgcggctgctggagcgg
ctcatggtgctggtgaacgccatggagatggcgcgcgtcaccggcgtgcccctcggctac
ctgctcagccgcggccagcaggtcaaggtcgtgtcccagctgctgcgacaggccatgcgc
caggggctgttgatgcccgtggtgaagacggagggtggtgaggactataccggggccacg
gtcatcgagccgctgaaagggtactacgacgttcccatcgccaccttggacttctcctcg
ctgtacccgtccatcatgatggcccacaacctgtgctacaccacactcctgcggcccggg
gccgcccagaaactgggcctgaccgaggatcagttcatcaagacgcccacgggggacgag
tttgtgaaggcatcggtgcggaaggggctgctcccccagatcctggaaaacctgctcagc
gcccggaagagggccaaggccgagctggccaaggagacagaccccctacggcggcaagtg
ttggacgggcgccagctggcgctgaaagtgagtgctaactctgtgtacggcttcactggc
gcccaggtgggcaggctcccgtgcctggaaatctcacagagtgtcaccgggttcgggcgc
cagatgattgagaagacaaagcagcttgtggagaccaagtacacggtggaaaacggctac
agcaccagcgccaaggtggtgtatggtgacacagactcggtcatgtgccgcttcggcgtc
tcatccgtggctgaggcgatggctttgggacgggaggctgcagactgggtgtccggccac
ttcccctcgcccatccggctagagtttgagaaagtctacttcccctacctgctcatcagc
aagaagcgttacgcaggcctgctcttctcctcccggccggacgcccacgaccgcatggac
tgcaagggcctggaggccgtgcgcagggacaactgccccctggtggccaacctcgtcacc
gcctcgctgcgccgcctgctcatcgaccgagacccctcgggcgccgtggctcatgcacag
gacgtcatctccgatctgctgtgtaatcgcattgacatctcgcagctggtcattaccaag
gagctgactcgcgctgccgccgattacgcgggcaagcaggcccacgtggagctggccgag
aggatgaggaagcgggaccccgggagcgcgcccagcctgggcgaccgcgtcccctacgtg
atcatcagcgctgccaagggcgtggccgcctacatgaagtccgaggaccccctgttcgta
ctggagcacagcctgcccatcgacacgcagtactacctggagcagcagctcgccaagccg
ctcctgcgcatcttcgagcccatcctgggcgagggccgtgccgaggctgtgctgctgcgt
atgggggtgggggtggggggaccccggggcagcccggcccacagccgggactgtcccatc
ttctacatgcgcaagaaggtgcggaaggacctggaggaccaggagcggctgctgcggcgc
tttggaccccccggcccagaggcttggtga
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integrated database retrieval system
