Bos indicus (zebu cattle): 109571852
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Entry
109571852 CDS
T04792
Symbol
SSC5D
Name
(RefSeq) LOW QUALITY PROTEIN: soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
KO
K25740
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
109571852 (SSC5D)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
109571852
NCBI-ProteinID:
XP_019833925
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All DBs
Position
18:complement(62397420..62421064)
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AA seq
1466 aa
AA seq
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MPMLGGVLLPGGGVSGSEERGPHCLTPPTSLPVALMGTQAVERLRLADGPHGCAGRLEVW
HGGRWGTVCDDGWDLRDAAVACRELGCGGALAAPGGAFFGEGAGPVWLSELACRGGERQL
GLCPHRGWKAHICSHEEDAGVVCAGQRGTDSRDHDDPPSVLDGDPWPGLAGELSPGSEEA
PVTPAPRPAGTPXSGSRKKSPRLPKPAKSTRAPVLTAGAPRQERLRLVSGPHGCAGRLEV
WHGGRWGTVCDDGWDLRDAAVACRELGCGGFLSAPEKARFGPGAGPVWMDDVGCGGGEQA
LRDCPRSPWGRSNCDHSEDAGLVCTGPAPRLRLADGPHGCAGRLEVWHGGRWGTVCDDGW
DLRDAAVVCRELGCGGALAAPGGAFFGEGAGPILLDDLRCRGNETALRFCPARPWGQHDC
HHREDAGARQTRSLVQGAQNPAAERFQELGPPWDWRLQAMLITXSVRHLPCAAQKDXGPW
EPQQGSELGGGLVPPWWGSDQSVGTPGLDSISDPFSWSWIPGLGRDPDAWLPGELATKPS
ARQTPSIPEKTTKAPGKMPKSTKKWVTKNAKRPTTQPPAMPTTKHSRVSGTQSPPELTSR
TTSTLATGASRRPTSEFTTRLTTQAPRRLTSHTTVTRTSRAPRERTSKTVATLATQGPRL
VTSEATVEPSAELPGQGSPESSTDPAPSPTGAAGPFRVRLADGPNRCAGRLEVWHAGQWG
TVCDDGWDLRDGMVTCWELGCGRVRPRVGKTHYGPGTGPIWLDDVGCKGSESSLSDCPAR
AWGQHNCDHEEDVGLTCTGYADEEDYPPWTWDPTSGEDLAKGTTSAGVPGHTLSRETTGS
PGAPTPATRRLPSTGDKDCREPSRTGDTXSGGVPAKETPTAATPGPPGTTRSSGHPSLAP
RLRGDTGSQRRRWPERRLRPTTARTKPAAPSPPASAAPGPADPPLTSASAPPLIRTAAST
PEATPDATSAVPPSPVAASRGSAHRTSTSPGLTGPSPDAAAAPAPTSRLSPTPPPTAPKE
LTSDPSAPAAATHLSPTSGLTPDPDKAPXRGTSPQPSTVPEPSSSPDRSTGPHPTTAPYS
TMTSHPEPTSHPTTAPYSSMTSHPAATSHPTTAPYSTMTSHPTTALYSTMTSHPAPTSHP
TTAPYTTMTSHPASTSHPTTAPYSTMISHPAATSHPTTAPYSTMTSHPAAASHPTTXLYL
TSTPHATTTPYPTTTPYPTTTPYPTXTPYPTTISHPTVTSHPTSALYPTTTPHATTTPYP
TTTPCFIPXTGAPCPSTSPASESSLSPAPSMDIPSTENFKAATSQSPEVTSPPTQTPHSA
PDPTVTPVGSSGDHLAPMAHPLDQPPPDHLSLGPAPSPSSGPLGPCEAPVXPVRVMACEP
PALVELVAAVRDVGSQLQRLTQALERDQQDRRALGLGLTQLVEAAQGLGQLGEVVKRLAE
VAWPPTTPVPTTTTPEWEERPLRGDV
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgcttggaggggtcctccttcccggcggcggggtttctggttcagaggagcga
ggacctcactgcctcacccctccaacctcccttccagtggctctgatggggacccaggct
gttgagcggctgcgtctggccgacgggccccatgggtgcgcgggccgcctggaggtgtgg
cacggcgggcgctggggcaccgtgtgcgatgacggctgggacctgcgggacgccgccgtg
gcctgccgggagctgggctgcgggggcgcgctggccgcccctgggggcgccttctttggg
gagggcgcagggcccgtgtggctgagcgaactggcctgccggggcggggagcggcagctg
ggcctctgcccccaccggggctggaaggcccacatctgctcacacgaggaggatgcgggg
gtcgtctgtgcaggccagcgtgggacagactccagggaccatgacgatccaccttcagtc
ctggatggggacccctggccagggctggcaggggagctgagccccggctctgaggaggcc
ccggtgacgcctgcaccccgcccagccgggaccccccasagtggctcccggaagaagagc
ccccggctgcccaagccggccaagtccaccagggccccagtgctgactgccggagccccc
cgccaggagcggctgcgcctggtctccggcccccacgggtgcgccgggcgcctggaggtg
tggcatggcgggcgctggggcaccgtgtgcgacgacggctgggacctgcgggacgccgcc
gtggcctgtcgggagctgggctgcgggggcttcctttctgcccctgaaaaggcccggttc
ggcccgggcgcggggcccgtgtggatggacgacgtgggttgcggaggcggagagcaggcc
ctgagagactgtccccgaagcccctggggccgragcaactgcgaccacagcgaggacgca
ggactggtctgcacaggcccggccccccggctgcgtctngccgatggcccccacgggtgt
gctggccgcctggaggtgtggcacggcgggcgctggggcaccgtgtgcgatgatggctgg
gacctgcgggacgccgctgtggtctgccgggagctgggctgcgggggcgcgctggccgcc
cccgggggcgccttcttcggggagggcgcggggcccatccttctggacgacctccgctgt
cgggggaacgagacggccttgcggttctgtccrgcgcggccctggggccagcacgactgc
caccaccgggaggacgccggggcccggcagactcggagcttggtacagggggctcagaac
ccagcggcagagcgttttcaggagctgggtcccccgtgggactggcgcttgcaagccatg
ctcatcacccrcagcgtccgccaccttccctgtgctgcccagaaagatgktgggccctgg
gagccacagcagggttctgagctggggggtggcctggtgccaccctggtggggcagtgac
cagtcagtgggaacccccggcctggactccatctcagaccccttcagttggagctggatc
cccggcctgggcagagacccggacgcctggctcccgggggagctggccaccaagccatct
gcgaggcagacccccagcatccctgagaaaaccaccaaggccccagggaagatgcccaaa
agcaccaagaagtgggtgaccaagaacgcaaagagaccaaccactcagcccccggcgatg
ccaaccactaagcactccagggtctcaggaacccagagtccccctgaactgacctcacgg
accaccagcaccctggccacgggggcctcccgaagacccacctctgagtttaccaccagg
ctgaccacgcaggccccccgcaggctgacctcacacaccacygtaactcggacttctcga
gcccccagggaacggacctctaagactgtggcgacgctcgccacccagggcccccgatta
gtgacctccgaggccaccgtggagccatccgctgagctcccaggacaaggttctccagag
tcatccacggacccggccccctcccccaccggcgcagcaggcccgttcagggttcgtctg
gcggacgggcccaaccggtgtgccgggcggctggaggtgtggcacgccggacaatggggg
acggtctgtgacgacggctgggacctgcgggacggcatggtgacctgctgggagctgggc
tgcgggagggtccggcctcgagtgggcaaaacccactacggccccgggaccgggcccatc
tggctggatgacgtgggctgcaagggcagcgaatcctcgctgagcgactgcccggcccgg
gcgtggggacagcacaactgcgaccacgaggaggacgtggggctcacctgcactggctat
gcagacgaggaggactatccaccctggacctgggaccccacctcgggggaggacctggcc
aaggggaccacctctgcaggggtgcccggacacactctgtcccgggaaaccacggggagc
ccaggggcccccaccccagcaacgaggcgccttccgagcacaggtgacaaggattgtcgt
gagccttcccggacgggggacacacmttcaggaggagtcccggccaaggagacccccact
gcagccacgcctggcccccctggcaccaccaggagctcaggccacccgtctctagctccc
aggctccgtggggacacaggctcccagaggagacggtggccagaacgccgactgcggccc
acgacggccaggaccaagcccgccgccccttccccacccgcctccgccgcgccggggcca
gccgaccctccactgacctccgcctccgcaccgccgctcatccgcacggcggcctcaacg
ccagaggcgacccctgacgcgacctccgcggtgccgcccagcccggtcgcggcctctcgg
gggagcgcccaccgcacctcgacgagccccggccttaccgggccctcccctgatgccgcc
gcggcccccgcgccgacctctaggctttcacccaccccaccgcccaccgcgcccaaggaa
ctcacctcagacccctctgcgccggcggcggcgacccacctctcccctacctccgggctg
accccggatccggacaaagccccagsccggggcacgtctccacagcctagcacagttcca
gaaccttccagttccccagaccgctccacagggcctcaccccaccacggccccgtactcc
accatgacctctcaccctgaaccgacctctcacccaaccacggccccgtactcctccatg
acctctcaccccgcagcgacctctcaccccaccacggccccgtactccaccatgacctct
caccccaccacggccctgtactccaccatgacctctcatcccgcaccgacctctcacccc
accacagccccgtacaccaccatgacctctcaccccgcatcgacctctcaccccaccacg
gccccgtactccaccatgatctctcaccccgcagcgacctctcaccccaccacggccccg
tactccaccatgacctctcaccccgcagcagcctctcaccccactactaycctttacctc
acctcgacccctcacgccaccacgaccccttatcccaccacgaccccttatcccaccacg
accccttatcccaccaygaccccttatcccaccacaatctctcaccctacagtgacctct
caccccacttctgccctttaccccaccacgacccctcacgccaccacgaccccttatccc
accaccaccccttgtttcattccttycacaggggccccttgcccctccacatctccagcc
tcagagtccagcctgtctcctgccccaagcatggacataccgtccactgagaacttcaaa
gcagccacaagccagagccccgaagtaacctctccacctacccagactccacactcagcc
cctgaccccactgtgacccctgtggggtcatctggggaccatctggctcctatggcccac
cccttggatcaaccaccccctgaccacctctcccttgggccagctcccagtccgagctca
ggccctctgggcccatgtgaggccccagtgcygcctgtgagggtcatggcttgtgagccg
cctgccctggtagagctggtggccgctgtgagggacgtgggcagccagctgcagaggctg
acccaggccctggagcgagatcaacaggaccgccgagccctgggactgggcttgacccag
ctggtggaggccgcccagggtctggggcagctgggtgaggttgtgaagagactggcagag
gtggcctggccccccaccacacctgtaccaaccactaccacccctgagtgggaagagagg
cctctgcggggagatgtgtga
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