Bos indicus (zebu cattle): 109571901
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Entry
109571901 CDS
T04792
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04514
Cell adhesion molecule (CAM) interaction
biu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109571901 (LRRC4B)
04517 IgSF CAM signaling
109571901 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
biu04515
]
109571901 (LRRC4B)
Cell adhesion molecules [BR:
biu04515
]
Immunoglobulin superfamily
NGL family
109571901 (LRRC4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
DUF7617
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
109571901
NCBI-ProteinID:
XP_019833973
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Position
18:complement(56598271..56622722)
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AA seq
711 aa
AA seq
DB search
MARARGSLCPPLPPGRMSWPHGALLFLWLFSPPLGAGGGGMAVTSAAGXXAPPATSCPAA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGSAGSAGGGGGGVPGGGGG
GYTYFTTVTVETLETQPGEEALQPRGTEKEPPGPTTDGVWGGGRPGEGAGQASSSTTAPA
PRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRRQ
HQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGGGVGGDSHLALPALERDHLNH
HHYVAAVFKAHYSSNPSGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcccgcggctccctgtgccccccactgccgcccggtaggatgtcctggccc
catggggccctgctgttcctctggctcttctccccgcccctgggggccggcgggggcggc
atggccgtgacatccgctgccggannnnnngccccgccggccacctcctgccccgcggcc
tgctcctgcagcaaccaggccagtcgggtgatctgcaccaggagagagctggccgaagtt
ccggccagcatccctgtcaacacgcggtacctgaacctgcaggagaacggcatccaggtg
atccggacggacacgttcaagcaccttcggcacctagagatcctacagctgagcaagaac
ctggttcgcaagatcgaggtgggcgccttcaacgggctgcccagcctcaacaccctggaa
ctgttcgacaaccggctgacgacggtgcccacgcaggccttcgagtacctgtccaagctg
cgtgagctctggctgcggaacaaccccatcgagagcatcccgtcgtacgccttcaaccgc
gtgccctcgctccgccgcctcgacctgggcgagctcaagcggctggagtacatctcggag
gcggccttcgaaggcctggtgaacctgcgctacctcaacctgggcatgtgcaacctcaag
gacatccccaacctgacggccctggtgcgcctggaggagctggagctgtctggcaaccgg
ctggacctcatccgcccgggctccttccagggcctgaccagcctgcgcaagctgtggctg
atgcacgcccaggtggccaccatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacgcccctg
caccgcctggagcgcgtccacctcaaccacaacccctggcactgcaactgcgacgtgctg
tggctcagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcgcgctgc
cacgcgcccgccggcctcaaagggcgctacatcggtgagctggaccagtcgcacttcacc
tgctacgcgccggtcatcgtggagccgcccacggacctcaacgtcaccgagggcatggcc
gccgagctcaagtgccgcacgggcacgtccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcgtaccgcgtgcgcatctccgtcctccacgacggcacg
ctcaacttcaccaacgtcactgtgcaggacacgggccagtatacctgcatggtgacgaac
tcggccggcaacaccacagcctcggccacactcaacgtctcggccgtggaccccgtggcg
gctggaagtgccggcagcgcgggcggcggcggtgggggcgtccccggaggcggaggcggc
ggctacacctacttyaccaccgtgacggtggagaccctggagacgcagcctggagaggag
gctctgcagccgcgcgggaccgagaaggagccgccggggcccacgacagacggcgtctgg
ggcgggggccggcccggggagggggcaggccaggcctcctcgtccaccacggcgcccgcc
ccgcgctcctcgaggcccacggagaaggcgttcaccgtgcccatcacggacgtgacggag
aacgccctcaaggacctggatgacgtcatgaagaccaccaagatcatcatcggctgcttc
gtggccatcacgttcatggccgccgtgatgctsgtggccttctacaagctgcgcaggcag
caccagctgcacaagcaccacgggcccacgcgcacggtggagatcatcaacgtggaggac
gagctgcccgccgcctccgccgtgtccgtggccgccgccgccgccgtggcgggcgggggc
ggcgtgggcggggacagccacctggccctgcccgcgctggagcgcgaccacctcaaccac
caccactacgtggcggctgttttcaaggcgcactacagcagcaaccccagcggcgggggc
tgcgggggcaagggcccgcccggcctcaactccatccacgaacctctgctcttcaagagc
ggctccaaggagaacgtgcaagagacgcagatctga
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