Bos indicus (zebu cattle): 109572260
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Entry
109572260 CDS
T04792
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109572260 (CHD9)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109572260 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
109572260
NCBI-ProteinID:
XP_019834432
UniProt:
A0A6P5DBM7
LinkDB
All DBs
Position
18:20838789..21066422
Genome browser
AA seq
2900 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLPDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQPGHSHSMHQTKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKTFMDVNVSGPHRVSVNHPPQMNNASTSQQSLSMQQFSQTSNPS
VHFLKCSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQPSAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLNSNNFQMLHSSHPQGNYNSKLSPVHM
NFPDPVDSGTQMGHFSDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQFD
ESAFGQDNSSHVLDHDLDRQFTSHLVTRPSDMVQTQLHNQARSWHSSLSNHQHLHDRNRL
CLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAKE
RGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLII
TLGKKQKRKNESSDEISDAEQMTQHAFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEVK
GSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRTIKKEISSGVMIDTEEFFVK
YKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVL
EVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDR
PPPXIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL
YEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQ
GRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE
HKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMML
RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMME
LRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGH
KVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR
AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR
ASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDI
DQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISG
RNSLVIDTPRIRKQTRPFSATKDELAELSEPESEGDEKPKLRRPCERSNGYGRTECFRVE
KNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITP
TEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKH
IKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDA
DKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKP
APAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNR
QIQQIQPTFPVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDP
DRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPSIFIQPITEE
RASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGSHDRDLLIGAAKHGV
SRTDYHILRDPELSFMAAQRNYSQSKMAXSRTSTPLLQQYQVALSASPLTSLPRLLDPKA
VILEDVKVKSENLKEEPQSSEEESMSSEETRTLIKSEPXSPKNGVLPQATGDQKSGGKGE
TDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSH
SRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHMKAYDE
ESVASLSTTQDETQDSFQMNNGTAESAYILQGGYMLAASYWPKDRVMINRLDSICQTVLK
GKWPSARRSYDANAVASFYTTKLLDSSGAATEYSEPSAPPPAGAAVKEEHDQSTQMSKVK
KHVREKEFTVKIKDEGGLKLTFQKQGLTQRRPLDSEDCAPGQQQYLTRLRDLQGASESSL
ASFPKSLPLSGTPIQSTLGANGVLLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVTL
GLTTSQISTGINPALSYTQPQGIPDTETPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHP
GYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFA
PPLKDLCRFLKENAEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSG
IAKATAAAAAATASSISGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPAG
LSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKEVEGKKERT
ESQNPENGGENSVSSSPASSTAALSTAAAASPLALNPLLLSNILYPGMLLTPGLNLHIPT
LSQSNXFDVQKNKNSDLGSSKSVEVKEEDSRVRDQEDKGGTEPSPLHENSTDEGSEKADA
SSGSDSTSSSSEDSDSSNED
NT seq
8703 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcccatgatggacttttttgatgatgccaatctgtttggtgagaccttagaa
ggtttgccagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaatcatgttcaaggtactcca
acacatcagaagatgactgattatgaacagttaaatcagtttgattcaatgaaatttcac
caagttaatcagtcttttggtagcccagctgaacatgtgttatcgccacactctcagttt
aattgttctccaatccacccccagaaccagcccaacggtttgtttccagatgtagcagat
ggcagtcctatgtggggccatcagacagctactagcatttcaaatcaaaatgggtctcct
tttcaccaaccaggacattctcactctatgcatcaaactaaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcgctacgctcacaa
caaaacagaaataatcttaacccagggcaaaattctcttagtcagtctaaaacttttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaatgaataat
gcatctacttcacaacagtccctttcgatgcagcaattttcccaaacatcaaacccttca
gtacacttcctcaagtgtagcagtcaccaagaaggtaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatgtgtcaccaaatagtcttcttcaaccctctgcagttcttgcacctaatcataca
aatcagactttatctgattttactgggagtaattccttttcacctcayaggggaatcaag
caagaatcgactcagcatatgctaaatcctaatacatcactgaattcaaataacttccaa
atgttgcattcatcacatcctcagggtaattacaattcaaaattatctcctgtgcacatg
aacttcccggatcctgttgactcaggaactcaaatgggccatttcagtgatcatgtagaa
actaatggcttttcatctttggaagagaatttacttcatcaagtggaatctcaaactgag
ccattcacaggacttgacccagaagacctccttcaagaaggtctccttccccagtttgat
gagtcagcatttgggcaagataattcaagtcatgttttagatcatgaccttgatcggcaa
tttacttcacatcttgtaacacggccttctgatatggttcaaactcagttgcacaatcag
gctcggagttggcattcatcactttctaatcatcagcatttacatgatagaaatcgcctg
tgtttacagcgacagcctccatcttccaagaagagtgatggttctgggacatacactaag
ttgcagaatacccaggtgaggatcatgtccgagaagaagcagagaaaaaaggtggaatca
gaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaaggag
cgaggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttcagtt
gaaggaaaagaggaraagaaaggaagaaggatgaaatccaagccaaaggacaaagagagc
aaaaaaacaaaaacttgttctaaattaaaagagaagacaaaaattggcaaactcattatt
acattgggtaagaaacaaaagagaaagaatgagtcttcagatgaaatatctgatgcagag
cagatgacacagcatgcattcaaagaggaagactctcaaaaaagaagatcaaatcgacaa
attaaaaggaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggttaaa
ggctctatgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacagtta
tttgtggagaatccaagtgaagaagatgctgcaattgtggacaagatactatcttctaga
actataaaaaaggaaatatcatctggagtgatgattgatacagaagaattttttgtaaaa
tacaagaattactcttatcttcactgtgaatgggccacagaacagcagcttctgaaagat
aaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacatttt
tttgcagatatggaagaagaaccatttaacccagactacgttgaagtagacagagtgtta
gaagtctctttttgtgaagataaagatactggcgagcctgttatttactatttagtaaag
tggtgctcattaccgtatgaagatagtacttgggaactaaaagaagatgtagatcttgca
aaaatagaagagtttgagcaattgcaagcttcaaggcctgacacaagacatttggatcgt
cctcctcctartatttggaaaaaaatagatcaatccagggattataaaaatggcaatcaa
ctcagggaataccaactggaaggactcaactggctcttattcaattggtacaatagacga
aactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattcctc
tacgaaatccttctgactggtataagaggacctttcctgattattgctccactttctact
attgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttatcat
gggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactcacag
gggcgtattattcgaggagcttacagattccaagccatcatcaccacttttgaaatgatt
cttggaggctgtggagagcttaatgcaattgaatggcgatgtgtaattattgatgaagca
cataggttaaaaaataaaaactgtaaacttctagaaggtctgaaactcatgaatctggaa
cacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagtctt
cttcactttctggagcccctaaggtttccttctgaatcaacgtttatgcaagaatttggg
gatctgaaaacagaggaacaggtgcagaaacttcaggctatcttgaaaccaatgatgttg
agacgattgaaagaagatgtggaaaagaagttggcacctaaggaagaaaccatcattgaa
gtagaacttactaacattcagaaaaaatactaccgggctattctggagaagaacttttca
tttttatccaaaggagcagggcagactaatgtacccaacttagtcaataccatgatggag
ctcaggaagtgctgtaatcacccgtatcttatcaaaggtgctgaggagaaaatacttgga
gaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatccag
tctgctggtaaattggtccttattgataaattgcttcccaaaatgaaagcaggaggtcat
aaagtgctcatcttctctcaaatggtacgctgccttgatatcctggaggactatcttata
cataaaagatatttatatgagcgaattgatggaagagtcagagggaatcttcgacaagct
gctatagatcgatttagtaaacctgattcggatcgatttgtctttcttctgtgtacccga
gctggtggattgggcatcaatttaactgcagctgatacatgtataatttttgattctgat
tggaatcctcaaaatgaccttcaggcccaagctcgttgccatagaattggtcagaataaa
gcagttaaagtctaccgactggtgactcgtaactcatatgaaagagagatgtttgaccga
gccagtctgaagctgggtctagataaggctgtgttacagagcatgagtggaagagaaagt
aatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaagaggt
gcttatggtgccattatggaagaagaagatgaaggytctaaattctgtgaagaagatatt
gatcagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtgggtcr
acatttgccaaggcaagttttgtggcatctggaaaccgaacagatatttcattagatgat
cccaacttctggcaaaaatgggcgaaaaaggcagaaatagatatagacgccatcagtggt
agaaacagcttggttattgacactccaagaattaggaagcaaacaagacccttcagtgcc
acaaaagacgagttagctgaattatctgaacccgaaagtgaaggagatgaaaagcccaaa
cttcggagaccctgtgagcgttcgaatggctatggaagaactgaatgctttagagtagag
aaaaatctgctagtttatggatggggccgatggagagagattctgtctcatggccgtttt
aaaaggcagctaaacgagcacgatgtagaaataatttgccgagccctcttagcatattgc
cttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattactcca
actgaagaygggcagacacgagagytacagaatcatctaggcctgtcagccccggtaccg
agaggtagaaaagggaagaaagtaaagactcaaacaagctcatttgatatacaaaaagca
gaatggcttcgaaaatacaatcctgagcaactacttcaagatgaaggctacaaaaaacat
ataaaacaccactgtaataaagttttgcttcgtgtaaggatgctgtattatctaaagcaa
gaagtcattggaaatgagtgtcagaaagtttttgatggagttgatgcaagtgacattgat
gtttgggtcccagaaccagaccactcagaagttccagctgagtggtgggattttgatgct
gataagtcactccttattggagtttttaaacatggttatgaaaaatataacactatccga
gcagacccggcattgtgcttcttggaaagagtgggaaaacctgatgagaaagcagttgct
gcggaacagagggcaaatgattatatggatggggatgtggaagatccagaatacaaacct
gccccagctatctttaaagatgatatagaggatgatgtttcctcaccaggagatcttgtt
atagcagatggagatggtcagctgatggagggtgataaagtttattggcctactcagtca
gctttaactacccgtttgaggcgtctcattactgcatatcagcgtactaataaaaacaga
caaatccagcagatacaacctactttccctgtgcctgccagtgttatgcagcctctttat
gaagaagccactcttaaccctaaaatggcagccaagatagaaagacagcagagatggaca
agaagagaagaagctgatttttacagagttgtatctacatttggagtggtatttgatcct
gacagaggccagtttgattggacaaaatttagggctatggctcggctacataagaaaact
gacgatagcttagagaaatatctgtacgcattcatgtcaatgtgtcggagggtttgtcgt
cttccttccaaagaagaattggtggatccaagtatttttatccagccaatcacagaagaa
cgtgcttctcggactttatatcgcattgaacttctaaggaaagtaagggaacaggccctc
cgacatccacaattgtttgagcgcttgaagctttgccatccaaatccagacttaccagtc
tggtgggaatgtggctctcatgatagggacttgctcattggagctgctaaacacggggtg
agccgaacagactatcatattcttcgggaccctgaactctcatttatggccgctcagagg
aactacagtcaaagtaagatggctyattcaaggacttctaccccacttttacagcaatat
caagtagcactttctgcttctcctcttacctctctacctaggctcctagatcctaaagct
gttattctagaggatgtgaaagttaaaagtgaaaaccttaaagaggagcctcagtcttct
gaagaagagtctatgtcttctgaggaaaccaggacactaataaagtctgagcctrtaagt
ccaaagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaggtgaa
acagacagacgcatggttgcagccagaacagagcctctaactccaaacccggcttctaag
aaacagcgagtccacaagagaggatcagagtctagttctgattctgactctgattctgag
agatcatcctgttcttccagatcatcttcttcctcgtcttcctcctcttcgtgttcccac
tctcgatcaggctctagctcttcttcttcctcctcttgttcttcagcatcatcttcatcc
tcatcctcatcttcctcttcctcatcctcctcctcatcttcgtcagaagaaagtgacagt
gaagaagaggaagtccaaaagcgagcagaaggtacccctcacatgaaagcctacgatgaa
gaaagtgtcgcatcactgagcactacccaggatgagacccaggatagtttccagatgaac
aacgggaccgcagagtctgcttacatcctacagggtggatacatgctggcagcgtcatat
tggccaaaggatcgtgtgatgatcaaccggctggacagtatttgtcaaacagtcctgaaa
gggaagtggccttcagctagaagaagttacgatgccaacgcagtggcttctttctatacc
acaaagctgctggacagctctggtgcagcmacagaatatagcgagcccagcgcgccccct
cctgcaggtgccgcagtcaaagaagagcatgaccagtcaacacagatgtcaaaggtgaag
aagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaagttg
acatttcagaagcaagggctcactcagagaaggccactggacagtgaagactgtgctcct
gggcagcagcagtacctcactcgacttcgggaccttcaaggtgcgtcagagagcagcctc
gccagtttcccaaaatccctaccactatcaggtactcccattcaatcaacccttggtgcc
aatggagttttattagacaaccagcctgtagtcaaaaaaaggcggggaaggaggaagaat
gtagaaggtgttgacatcctcttttttaacagaaataaaccacctaatcatgttacgtta
ggcttaaccacctcacagatttctacagggataaatccagcactgtcctatactcaacct
caaggaattcctgatacagaaactcctgttccagttattaaccttaaagatgggacaaga
cttgcaggcgatgatgcaccgaagagaaaggatttggaaaagtggcttaaggagcaccca
ggttatgtggaagatttaggagcttttattcctcgaatgcaactccatgaggggagaccc
aaacaaaaaaggcatcgctgcagaaaccccaataaattagatgttaatagtctcactgga
gaagaacgtgttcagctgattaacagaagaaatgccagaaaggttggaggtgcatttgct
ccccctttgaaagatttgtgtcggttcctgaaagaaaatgcagaatatggagtagctcct
gaatggggagatgttgttaagcagtctggatttcttccagaaagtatgtatgaacgtatt
ctcactggtcccgtggtaagagaggaagtaagcaggcgagggagacgacctaaaagtgga
attgcgaaggccacagcggcggcggcagctgcaactgccagcagtatttcaggcaatcct
ttgttagccaatgggttactgccaggtgtggacctcacaactcttcaggccttacaacaa
aacctacaaaacttgcaatcactgcaagtgactgcagggctgatgggaatgcctgctggc
ctttcttctggaggagaagctaaaaatgtggccgccatgttccccatgctgctgtcggga
atgactgggttgccaaatctgttgggcatgggagggctcctgacaaagccgacagaatcy
ggaacagaagaaaaaaagggaaatgactctaaggaggtggaagggaaaaaagaaaggaca
gagagccaaaaccccgagaacggcggtgaaaactctgtgtcaagttctcctgcatcctct
actgctgcgttaagtacagctgcagctgccagcccrttagctctgaacccactgttacta
tctaatattctttatccagggatgcttctcactccaggccttaatcttcatattccaact
ttgtctcagtccaacamttttgatgtacagaaaaacaaaaacagtgacttaggctcatct
aagtctgtggaagtaaaggaagaagattccagagttagagatcaggaagacaaaggggga
actgaaccgagtcctctccatgaaaacagcacagatgagggttcagagaaagccgatgct
tcatctggatctgatagtacatcatcgtcatccgaggattcagattctagtaatgaagac
tga
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integrated database retrieval system
