Bos indicus (zebu cattle): 109572547
Help
Entry
109572547 CDS
T04792
Name
(RefSeq) AFG3-like protein 1 isoform X1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109572547
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
biu01002
]
109572547
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
biu03110
]
109572547
Peptidases and inhibitors [BR:
biu01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
109572547
Chaperones and folding catalysts [BR:
biu03110
]
Other chaperones and cochaperones
AAA proteases
109572547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
AAA_5
TIP49
AAA_16
RuvB_N
AAA_17
AAA_28
AAA_2
AAA_33
nSTAND3
Mg_chelatase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
109572547
NCBI-ProteinID:
XP_019834985
UniProt:
A0A6P5DBK6
LinkDB
All DBs
Position
18:13817337..13837841
Genome browser
AA seq
775 aa
AA seq
DB search
MSQRLVAXXXSRAVVGPLALLWRCGLGPRGGRTFAAGARALGTTQQCLQGIRFQQSALQI
RLASVSHWLCSKPPKGTSEPKDAGPGADGGKRGGKRDDFAWWKRMQKGKVPWDDKDLRSL
AVLGAGVVAGFLYFYFRDPGKEITWKHFVQYYLARGLVDRLEVVNKQFVRVIPAPGTSLE
KYAWFSIGSVDTFERNLETAQWELGIEPPNQTAVVYTTESDGTFLRSLVPTLLLIGIFLY
AMRRGPMGAGRGGRGGRLFGIGETIAKIIKDDIGVRFADVAGCEEAKLEIMEFVNFLKNP
KQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVR
DMFALARKNAPCILFVDEIDAIGRKRGRGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVL
AGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESLSKDALARKLA
ALTPGFTGADISNVCNEAALIAARHLNPSVGEKHFEQAIERVIGGLEKKTQVLQPGEKMT
VAYHEAGHAVVGWFLEHADPLLKVSIVPRGKGLGYAQCLPREQYLYTREQLFDRMCAMLG
GRVAEQLFFGRVTTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDLPRPGEALVEKPFS
EATAQLIDEEVRRLIGSAHARTLDLLTRCREQVDKVGRRLLEKEVLERADMVELLGPXPF
AEKVTYEELVEGTGGLEEDTALPEGLQGWRGGPTAGEPSLAPPPGEQPLGPQEAN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcggctggtggcggnnnnnnncagcagggcggtggtggggccgctcgccttg
ctgtggcggtgcggccttggcccacgagggggcaggacgttcgcggcaggcgctcgggcg
ctcggaaccactcagcagtgtctccagggaatccgctttcagcagtcggctctgcagata
agactggcgtcagtttcccattggctgtgttcaaaaccacccaaaggaactagtgaacca
aaggatgctggtcctggagcggacggagggaagagaggaggaaagcgggatgactttgcc
tggtggaaacgaatgcagaaggggaaggtgccctgggacgacaaggatctccgcagtctg
gccgtgctgggggcaggtgtcgttgcaggatttctctacttctatttccgagatcctggg
aaggaaatcacttggaagcacttcgtgcagtattacctggcgagaggtctggtggatcgg
ctggaagtggtgaataaacagttcgtgcgtgttattcctgcccctgggacatcactcgag
aagtatgcgtggttcagcattggcagtgtggacaccttcgagcgcaacctggagaccgcc
caatgggagctaggcatcgagccccccaaccagacggccgtggtctacaccaccgagagc
gatgggactttcttgcgaagcctggtgcccacccttctcctgattggcatcttcctctat
gccatgaggaggggtccaatgggggctgggcgtggtgggcgaggagggcgcctcttcggc
attggtgagacaatagccaagatcatcaaagatgacatcggtgtgcggtttgcagacgtg
gctggttgcgaagaagccaagctggagatcatggagtttgtgaatttcctgaagaacccc
aaacagtaccaggaccttggggccaaaattccaaagggagccctgctcacaggtcctccc
ggtaccggcaagacgcttctcgccaaggcaaccgcaggggaggctggtgtgcccttcatc
accgtgaatgggtctgagttcctggagatgtttgttggtgttggcccagctcgggttcgt
gacatgtttgcactggcccgraaaaacgctccctgtatcttgtttgtggacgagattgat
gcaattggccggaagcgtggccgtgggcactttggaggccagagtgagcaggagaacacc
ctgaaccagctgctcgtggagatggacggattcaactctaccacgaacgttgtcgtgctg
gctggaaccaaccgccctgacgtccttgacccagctctgatgcggccgggccgcttcgac
cgtcagatttacattgggcccccggacatcaaaggcaggtcgtctatcttcagggtccac
ctgcgtccactcaagttggacgagagcctcagcaaggatgctctggcaaggaagcttgcg
gccctcactccaggcttcacaggtgctgatatttctaatgtttgcaatgaagccgccctg
atcgccgctcgccacctaaacccctctgtcggggagaagcacttcgagcaggccatcgag
agggtcattggaggccttgagaagaagacacaggtcctgcagcctggcgagaagatgaca
gtggcctaccacgaggctggccatgcggtggtgggctggttcctggaacacgcagacccc
ctgctcaaggtgtccatcgtcccccggggcaaggggctcggctatgcccagtgtctgccc
agggagcagtacctgtacacacgggagcagctctttgaccgcatgtgtgccatgctgggc
ggccgcgtggctgagcagctgttcttcgggcgggtcaccacgggggcccaggatgacctg
aggaaggtcacccagagcgcctatgcccagattgtgcagttcgggatgagcgagaagctg
ggccaggtgtccttcgatctcccgcggccaggygaggcgctggtggagaaaccgttcagc
gaggccacggcccagctcatagacgaggaggtgcggcggctcattggttctgcgcatgcg
cgcaccctggacctgctcacgcgctgccgcgagcaggtggacaaggtgggcaggcggctg
ctggagaaggaggtgctggagcgggcggacatggtggagctgctcgggccgcngccgttc
gccgagaaggtcacctacgaggagctcgtggagggcaccggcggcctggaggaggacacg
gcccttcccgagggtctgcagggctggcgtggggggcccactgcaggagagcccagccta
gcacctccgcctggagagcagcctctgggaccccaggaagcaaattaa
DBGET
integrated database retrieval system
