Bos indicus (zebu cattle): 109572615
Help
Entry
109572615 CDS
T04792
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109572615 (PUM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
109572615
NCBI-ProteinID:
XP_019835108
UniProt:
A0A6P5D9Y8
LinkDB
All DBs
Position
2:126381590..126507616
Genome browser
AA seq
1193 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMF
SAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPPQYYGVTPWGVYPASLFQ
QQAAAAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQADPLVAAAAVNS
ALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQ
AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSNS
QSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSD
LYKRTSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLG
GLTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLED
FRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVD
VFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEM
VRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRI
LEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS
QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE
PAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgacgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggtttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacccaatgcgcttgctgtccagcagttgaca
gccgctcagcagcagcagtatgcgttagcagccgcgcatcaaccccacatcggtatgttt
tcagcaggtttagctcccgctgcattcgtccccaacccatatatcatcagtgctgcgccc
ccagggacggacccctacacagctggattggctgcagcagcgacgctaggcccggctgtg
gtccctccccagtattacggagttactccctggggagtctaccctgccagtcttttccag
cagcaagccgccgccgctgctgcagcaacaaattctgctaatcagcagaccaccccacag
gctcagcaagggcagcagcaggttctccgtggaggagccagccagcgtcctttgacgccg
aatcagaaccagcagggacagcaagccgatccactggtggcagctgcagcggtgaattct
gcccttgcgtttggacaaggactggctgcgggcatgccaggttatccagtcttggctcct
gctgcttactatgaccaaaccggtgcccttgtggtgaatgcaggagcgagaaatggtctt
ggagctcctgttcgacttgtagctcccgccccagtcatcattagttcctcagctgcacaa
gcagctgttgcagcggccgcagcttcagcaaatggagcagccggtggtcttgctggaaca
acaaatggaccatttcgccctttaggaactcagcagcctcagccccagccccagcagcag
cccagtaacaacctggcatccagctctttctacggcaacaactctctgagcagcaattca
cagagcagctccctcttctcccagggctccgcccagcctgccaacacatccttgggattt
ggaagtagcagttctctcggcgccaccctgggatcagcccttggagggtttggaacagca
gttgcaaactccaacactggcagtggctcccgccgtgactccctgactggcagcagtgac
ctttataagaggacatcgagcagcttgacccccattggacacagtttttataacggcctt
agcttttcctcctctcctggacccgtgggcatgcctctccctagtcagggaccaggacat
tcacagacaccacctccttccctctcttcacatggatcctcttcaagcttaaacctggga
ggactcacaaatggcagtggaagatacatctctgctgctccaggcgctgaagccaagtac
cgcagcgcaagcagtgcctccagcctcttcagccccagcagcacccttttttcctcctcc
cgtttgcgatacggaatgtctgatgtcatgccctctggcaggagcaggcttttggaagat
tttcgaaataaccgatatcctaatttacaattgcgggagattgctgggcacataatggag
ttttcccaagaccagcatggttccagattcattcagctgaaacttgagcgtgccacacca
gccgaacgccaacttgtcttcaatgaaatccttcaggccgcttaccagctgatggtggat
gtatttggaaattacgtcattcagaagttctttgaatttggcagccttgaacagaagctg
gctttggctgagcggattcgaggccacgtcctgtcattggcactgcagatgtatggctgc
cgtgttatccagaaagctcttgagtttattccctcagaccagcaggtaattaatgaaatg
gttcgggaactggatggccacgtcctcaagtgtgtgaaagaccagaatggcaatcacgtg
gtgcagaagtgcatcgaatgtgtgcagccccagtctctgcagttcatcatcgatgcgttt
aaggggcaggtgtttgctttgtccacgcatccttatggctgccgagtgattcagaggaty
ctggagcactgtctccctgaccagacactccctattttagaggagcttcaccagcacaca
gagcaacttgtacaggatcagtatggaaattacgtaatccagcatgtattggagcatggt
cgtcctgaggataaaagtaaaattgtagcagaaattcgaggcaatgtacttgtgttgagt
cagcacaaatttgcaagcaatgttgtggagaagtgtgtcactcacgcctcccgtacagag
cgcgctgtgcttattgacgaggtgtgcaccatgaacgatggtccccacagtgccttatac
accatgatgaaggaccagtatgccaactacgtggtccagaagatgatcgatgtggcagag
ccagcccagaggaagatcgtcatgcacaagatccggccccacatcgcgactcttcgcaag
tatacttayggcaagcacatcctggccaagctggagaaatactacatgaagaatggcgtt
gacttagggcccatctgcggcccccctaatggtattatctga
DBGET
integrated database retrieval system
