Bos indicus (zebu cattle): 109572643
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Entry
109572643 CDS
T04792
Symbol
PAPD5
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5 isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109572643 (PAPD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109572643 (PAPD5)
03016 Transfer RNA biogenesis [BR:
biu03016
]
109572643 (PAPD5)
Enzymes [BR:
biu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109572643 (PAPD5)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109572643 (PAPD5)
Transfer RNA biogenesis [BR:
biu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109572643 (PAPD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
109572643
NCBI-ProteinID:
XP_019835161
UniProt:
A0A6P5DAA1
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All DBs
Position
18:17666880..17683273
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AA seq
489 aa
AA seq
DB search
MSPRPEEEKMRMEVVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLP
LWTLEEALRKHKVADEDSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDF
TKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYG
VLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDV
GRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRVTDEVATYRDWISK
QWGLQNRPEPSCNGNGVTLIVDTQQLDKCNNNLSEENEALGKCRSKTSESISKHSSNSSS
GPVSSSSATQSSSSDVDSDATPCKTPKQLLCRPSTGNRVGSQDVSLESSQTGGKMQSTQT
TNTPNSTNKSQHGSTRLFRSSSKGFQGTTQTSHGSLMTNKQHQGKSNNQYYHGKKRKHKR
DAPLSDLCR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagaccagaggaggagaagatgcggatggaagtggtgaacaggatcgagagt
gtgattaaggagctctggcccagtgctgatgtccagatatttggaagttttaaaactggc
ttgtatttacctacaagtgacattgatcttgtggtattcgggaagtgggaaaacctaccc
ctctggaccctggaggaagctcttcggaagcataaggttgcagatgaagattcggtgaaa
gttctggacaaagcaactgtacctattattaaattaacagattcttttaccgaagtgaaa
gttgatatcagctttaatgtacagaatggcgtcagagcagctgacctcatcaaagatttt
accaagaaatatcctgtattgccatatttggttttagtattgaaacagttcttattacag
agggaccttaatgaagtatttacgggtggaattggttcttatagtctctttttaatggca
gtaagtttccttcagttacatcccagggaagatgcttgcatccccaatacaaactatggt
gttctcttaatagaattttttgaattatatggacgacacttcaattatttaaagactggc
atccggataaaggatggtggttcctatgtggccaaagatgaagtacagaaaaatatgcta
gacggctacaggccatccatgctttatatagaagatcctttacaaccaggtaatgatgtt
ggaaggagttcatatggggccatgcaggtgaaacaggcctttgattatgcctacgttgtc
ctgagtcatgctgtatcaccaatagcaaagtactatcccaacaatgagacagagagcata
ttaggtagaataattagagtaacagatgaagttgccacatatagagattggatatcaaag
cagtggggcttgcagaataggcccgagccttcatgcaacggaaatggtgttaccttgata
gtagatactcagcagttagataaatgtaataataatctatctgaagaaaatgaagccctt
ggaaaatgtagaagtaaaacttcggaatctattagtaaacactcttcaaactcttcatca
ggtccagtgtcttcctcttcagccacacagtccagctctagtgatgttgattccgacgcg
acaccatgcaaaaccccgaaacagctgctctgccgtccgtccactgggaaccgggtaggg
tcgcaggacgtgtccttggagtcctctcagacaggcgggaagatgcagagcacccagacc
actaacacacccaacagcaccaacaagtcccagcacggatcaacaaggctctttcgttct
tccagcaaaggcttccaaggtacaacccaaacaagccatggttccttgatgacaaacaaa
caacatcaagggaaatcaaataatcagtattaccatggcaaaaagaggaaacacaagagg
gacgcccccctctcagacctttgtagatag
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