Bos indicus (zebu cattle): 109572686
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Entry
109572686 CDS
T04792
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109572686 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109572686 (EDC4)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109572686 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
109572686 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
DUF445
Motif
Other DBs
NCBI-GeneID:
109572686
NCBI-ProteinID:
XP_019835252
UniProt:
A0A6P5DDS5
LinkDB
All DBs
Position
18:34396582..34407760
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AA seq
1400 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAENQRPSNAYNGDLNGLLVPDPLCSGDSA
STNKPGFRAMPPINLQEKQVICLLGDDSSTGIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALINGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRTNHSTWPVDVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSPVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPSHS
THEDFPFGESRPELGSEGLGSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSASLQQIAASPSSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQ
LDGGLTMSSSSLQASPRGLLPSLLPGPADKLTPKGSGQVPTAASALALELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGASAPEGLEPDSMASAASALHLLSP
RPRPGPELGPQLSLDGVPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGNFGTKVPT
PRLPAKDWKTKGSPRASPKLKRKGKKDDGDSSLGSRLTEHQVAETPEDWPALIWQQQREL
AQLRHSQEELLQRLCAQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQE
QLTQQLSQALSSAVAGRLERSVRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVESSM
KENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSF
RLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVGTLQGATEQMAATVSGSVRAEVQ
HQLHVAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAHLDC
QAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSL
IQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSL
GKAARRLSLMLHGLMTPSLP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcttgtgcgagcatcgacatagaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggccggcgggaggccccagtgcagagaaccaacgaccatctaatgcc
tacaatggagatctcaatgggctcctggtcccagaccccctctgctcaggtgacagtgct
tcaacaaacaagcctggtttccgagccatgccacctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccactggcattggaattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcgagcaaggcacgggggagcaacaaggtgaaa
attcagcctgtcgccaagtatgactgggagcagaaatactactatggcaacttgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcaatggtg
cgagtgatcagtgtcagcacttcagaacggaccctgctcaaaggcttcacaggcagcgtg
gctgatctggcctttgcacacctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtatggcgcttggccctgattaatggcaaaattcaagaggagatcttggtc
cacatccgccagccagagggcactccgctgaaccacttccgcaggatcatctggtgcccc
ttcatccctgaagagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtgtgggacctggacatgctccgcaccaaccacagcacctgg
cctgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacatgc
ttgagtgaaggggccctctcacctgatgggactgtcctggctactgcaagtcatgatggc
ttcgtcaagttctggcagatctacatcgagggacaggatgagccacggtgtttacatgag
tggaagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccctttctggagattcctcattactggcgctgaccagaatcgggag
ctgaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagcccagtgagtgtgccccccagcctcaaggtttgcctggacctctcagcggaa
tacctgatcctcagtgatgtacagcggaaggtcctctacgtgatggaactgctgcagaac
caggaggagggccgggcctgcttcagctccatctctgagttccttctaacccaccctgta
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacacagaggtgctgcct
gccgaggaggagaatgacagccttggggccgacgggacccatggagcaggtgcaatggag
tctgcagccggtgtgctcatcaagctcttttgtgtgcacactaaggcattacaggacgtc
cagatccgctttcagccacagctgaaccctgacgttgtggccccactcccctcgcactct
acccatgaagactttccatttggagagtctcggccagagctgggctcagagggcctggga
tcagctactcatggctcccagcctgacctccgacgtatcgtggagttgcctgcaccagct
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acgcctagcgcctccctgcagcagattgctgcatctcccagcagcagcagcagcagcagc
agcagtagcagcagcagcagctcctctctgacagccgtgtctgccatgagcagtacttcg
gccgtggacccctccttgcccaggccacctgaggagctgaccttgagccccaagctacag
ctggatggtggtctgaccatgagcagcagcagcctgcaggcaagcccacgtgggctcctg
cccagcctgctcccaggtccggctgacaaactgactcctaaagggtctggtcaggtgcct
actgctgcctctgcactcgccctggagctgcaggaagtggaacccctggggctgcctcag
gcttcccccagccgcacccgctcccccgatgttatctcctcagcctccactgccttgtcc
caggacatccctgagattgcatctgaggcgctgtcccgtggctttggcgcctctgctcct
gagggcctggagccagacagcatggcctcagcggcctcggcgctccacctgttgtctcca
cggccccggccagggcccgagctcggcccccagcttagcctggatggggtccctggggat
ggggatcggcatagtaccccttccctcctggaggcagccttgacccaggaggccacagcc
cctgacagtcaggtctggcctacagctccagacatcactcgcgagacctgcagcagcctg
gcagagagcccccggaatggcctccaggaaaagcacaagagcctggccttccaccgacca
ccttatcacctgctgcagcaacacgacagccaggacgccagtgccgagcaaagtgaccat
gatgacgaggtggccagcctcgcctctgctgcagggaactttggcaccaaagtgcccact
ccacgtcttccagccaaggactggaagaccaagggatcccctcgggcctcacccaagctc
aagagaaagggcaaaaaggatgatggggattcatccttgggatcccggctcacagagcac
caggtggcagaaacccctgaggactggccggcactgatctggcagcagcagagagagctg
gcacagctgcggcacagccaagaagagctgctgcagcgcctgtgcgcccagcttgaaggc
ctgcagagcaccgtcacaggccacgtggagcgagccctggagtcaaggcacgagcaggag
cagcggcgactggagcgggccctggccgaggggcagcagcggggtgggcagctgcaggag
cagctgacacagcagctatcccaggcgctgtcttcagcggtggcagggcggctggagcgc
agcgtacgagacgagatcaagaagacggttcctccatgtgtctcccggagtctggagccc
gtggctggccagctcagcaactcggtggccaccaaactcacagccgtggagagtagcatg
aaagagaacatctctaaactgctcaagtccaagaacttgacagatgccattgcccgagca
gccgcagacacattacaggggccaatgcaggccgcctaccgggaagccttccagagtgtg
gtcctgcccgccttcgagaagagctgccaggccatgttccagcagatcaatgacagcttc
cgactgggcacacaggagtacttgcagcagttggagagccacatgaagagccgcaaggca
cgagagcaggaggcacgggagcctgtgctggcccagcttcggggcctggtcggcaccctg
cagggggccacggagcagatggcggccactgtgtctggcagcgttcgggctgaggtgcag
caccagctgcatgtggccgtgggcagcctgcaggaggcgattctagcacaggtacagcgc
atcgtgaagggcgaggtgagtgtggctctcaaggagcagcaggccgccgtcacctctagc
atcatgcaggccatgcgctcagccgccggcacacctgtccctgctgcccacctcgactgc
caagcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggccctgacagctgccgacctgaacctggtgctatacgtgtgtgaaacagtggac
ccaggccaggtttttgggcagccaccttgccccctctcccagcctgtactcctttctctc
atccagcaactggcctctgatcttggcactcgaactgacctcaagctcagctacctggaa
gaggctgtaatgcacctggaccacagtgaccccatcactcgggaccacatgggctccgtc
atggctcaggtgcgccagaagctcttccagttcctgcaggcggagccacacaactcactt
ggcaaagcagcccggcgtctcagcctcatgctgcacggccttatgacccccagcctccct
tag
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integrated database retrieval system
