Bos indicus (zebu cattle): 109572750
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Entry
109572750 CDS
T04792
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109572750 (TAF1C)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109572750 (TAF1C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
109572750
NCBI-ProteinID:
XP_019835376
UniProt:
A0A6P5DAU2
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Position
18:complement(9666463..9676288)
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AA seq
893 aa
AA seq
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MDFPSSLPPSLFMTGPLGQSDVPDLSFMCSWRDALTLPASSPQGSQDSAPHVAKALLWEP
DMPGPLPLLPPGPDPWDPGLTAKDLLFRGGYQFRRHPRAVLDVTEQISRFLWNHGDIAFA
PLGRLLLENFKLEGAHSRSKTKTVVSVKRLHQDLGGHQPWGCPWAYLSQRQRRFSILGAP
ILSTSVASLLGELLHEELALRWERLLLDDACTGGALAWVPGRTPGAGQLVYPVGGAMDTL
CFQKVSLTPESEPQVLSDPGRIQLRGPVRQVVTRSVQGEALLAVRSDHHCGLWKVSTQGQ
PAXLQVLQVDKGATGISLSPHLPGELVICSRSGVVCLWSAEDGLRQIYKDPETLVFRDPS
SWRWADFTAHPRVLTVGDRTGVKMVDTQGPPGCGLLLFRGGAEASCQKGERVLLTQHLGD
LGPESLHPMLHLICTQFSLYLVDERLPLVPLLKWNHGLRSAPLLARLLPPPRPGLPQPLL
LASQGGELQLLHLAGVGASTPRLVGLPQSLPTRSDSLSAFPLLEPKSHRRLQERLKAPTV
GLAAAIPPPTSTPVLSLFQLSAAGDVFHQRLHLRADPGPNARAPAASWTPQATACCSRWL
EALLEVPLTPPVWAAPTFSHRRLLGGFEPQKVEGPVPEGFXRAMAQGRLLQRRDLGLLPT
EERPPAPEPGPEDELSERLEAAWEFGAAAWWERQRGSRAGPGKQPKRHKRRTQLSSTFSS
LSGRVDLSDAASPAPSPDHTLPEARPQPPRTPPSQELTQEPWAQGVPSERQQTLRDYMAE
LPLRTDTPGGASXLSSQTPSVRATPSRQHAPQDCTVQQLPRGDTPEGTTLLSSQTPSVRA
TPSRPHTPRDGIVQQLPRGDTPEGATPPSSQTPSFLATRSGSQRLRKKPRMGF
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctcccaccctcgttgttcatgaccggcccccttggtcagagc
gatgtccctgacctgtcgttcatgtgcagctggagagacgcgctgaccctcccggcgtcc
tcaccccaaggctctcaggacagcgcrccgcacgtggccaaggctctgctctgggagccg
gacatgcctgggcccctgcccttgctgcctcctggtcccgatccctgggaccccggcctg
actgccaaagatctgcttttccggggaggctaccagttccggagacatccccgagccgtg
ctggatgttactgagcagatcagccggttcttgtggaaccacggagacatagcctttgca
cccctggggaggctactgctggagaatttcaaactggaaggagcacatagccgctctaag
acgaagacagtggtcagtgtgaagaggctacaccaggacctcggtggacaccagccctgg
ggctgtccctgggcttacctcagccagcgccagcgccggttctccatccttggggccccg
atcctgagcacgtcggtggcgagcctcctgggagagctgctgcacgaggagctggccctg
cgctgggagcggctgctcctggatgatgcctgcactgggggcgcgctggcctgggtgcct
ggcaggacccccggggccgggcagctggtctaccccgtgggcggtgccatggacacactg
tgtttccagaaggtcagtctgaccccagagagcgagccccaggttctcagcgaccctggc
cgtatccagctccggggacccgtccggcaggtggtgacccgcagcgtgcagggagaagct
ttgctggctgtccgctctgaccaccactgtggcctgtggaaggtcagcacgcaggggcag
ccagccyctctccaggtgctgcaggtggacaagggggccacagggatcagcctcagccct
cacctgcccggagagctggtcatctgcagccgctccggagtygtctgtctgtggagcgct
gaagacgggctgcggcaaatctacaaggaccccgagaccctggtgttccgggacccttct
tcctggcgctgggcagacttcaccgcccaccctcgagtgctgacggtgggtgaccgcacc
ggagtgaagatggtggacactcagggcccgccgggctgcggtctgctgctttttcgtgga
ggggcagaggcgtcgtgccagaaaggagagcgggtcctgctcacccagcacctgggggat
ctcggcccagagtctctgcaccccatgctccacctcatctgtacccagttctccctctac
ctggtggatgagcgcctccccttggtgcccctgctcaagtggaaccatggcctccgctct
gcacccctgctggcccggctgctgccgccaccgcgcccaggcctcccccagccgctgctc
ctggccagccagggtggggagctgcagctgctgcacctcgcaggagtgggggcctccaca
ccccgcctggtggggctcccccagtctctccccaccaggagcgactccctctcggccttc
cccctgctggagcccaagagtcaccggcggctgcaggagcgtctgaaagcacccaccgta
ggtctggctgctgccatcccgccccccacctccacaccagtgctgtcgctcttccagctt
tccgcggccggagatgttttccaccagcgcctccacctccgggcagaccccgggcccaat
gctcgtgcccccgcagcttcctggacaccccaggccactgcctgctgcagccggtggctg
gaggccctgctggaggtgcccctgactcccccggtgtgggcagcacccaccttctcccac
cgccggctgctgggtggcttcgagcctcagaaggtggaggggccggtgcccgagggtttc
crcagggccatggcccaggggcggctcctacagcggagggacctgggcttgctccccacg
gaggagcggccccccgcccccgaacctggccccgaggatgagctcagtgagcgtctggag
gcagcctgggagttcggggcagcggcctggtgggagaggcagcggggcagccgcgcgggg
cccgggaagcagcccaagcggcacaagcgccggactcagctgtccagcaccttctcctcc
ctcagcggccgtgtggacctctcagacgccgccagccccgcgcccagcccagaccataca
ctgcccgaggccaggccccagcccccgaggaccccgccctcccaggagctcacccaggag
ccctgggcccagggcgtcccctcagagcggcagcagaccctccgggactacatggctgag
ctgccgctccgcacggacaccccaggaggggcctctgygctctcctcccagacccccagc
gtccgggccacgccctccaggcagcacgccccccaagactgcacggtccagcagctgccc
cgaggggacaccccagagggcaccaccctgctctcctcccagaccccaagtgtccgggcc
acgccctccaggcctcacactccccgggatggcatagtccagcagctgccccgaggggac
accccggagggtgccaccccgccctcctcccagacccccagctttctggccacacgctct
ggctctcagcggctccggaaaaagccccgcatgggcttctga
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