KEGG   Bos indicus (zebu cattle): 109572880
Entry
109572880         CDS       T04792                                 
Symbol
XRCC1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109572880 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:biu03400]
    109572880 (XRCC1)
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109572880 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 109572880
NCBI-ProteinID: XP_019835593
UniProt: A0A6P5DB82
LinkDB
Position
18:complement(51485357..51504275)
AA seq 632 aa
MPEIRLRHVVSCSSQDSTYCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPAESRSGSNSNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDAPYGLSFVRFHSPPDKDEAEVSSQKVTKLGQFRVKEEDESA
SSLKPGALFFSRINKTPPVAASDPAGPSYAAATLQASSAASSASPASKAAGSXFKPQESP
KGKRKLDLNQEEKKTPSKPSAQPSLPALKRPKLPAPARTPATPRTPAPARGAAPGKPRGE
GAEPKAPRAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLIC
AFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGSGSSSEDEGGSHSGGSG
NEAPKAPRKRPQTKAKPPQAAGPSSPQRPPTPEETKPASPGAQEDNDDTEAEQSEGQDNG
AEDSGDTEDELRRVAEQKEERQPPGQEENGEDPYAGSTDENTDHEGPPESPDLPVPELPD
FFQGKRFFLYGEFPGDERRMLSRYVTAFNGSVSXXXXXXXRFVITAQEWDPSFEEALTDN
PSLVFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgccatgtggtgtcctgcagtagccaggactcgacctactgt
gcagaaaaccttctcaaggcagacacttaccgtaaatggcgggcagccaaggcgggtgag
aagaccatctctgtggtgctccagttggagaaggaggaacagatccacagcgtggacatc
gggaatgacggctcggccttcgtggaggtactggtgggcagctcagctggaggtgcyggg
gagcaggactatgaggtccttctggtcacctcgtctttcatgtcccctgccgagagtcgc
agtggctcaaactccaaccgcgttcgtatctttgggcctgacaagctggtccgggcagca
gcagagaagcgctgggaccgagtcaaaattgtctgcagccagccctacagcaaggatgcc
ccctatggcctgagttttgtacggtttcacagccccccagacaaagacgaggccgaggtc
tcatcccagaaggtgaccaagctcggccagttccgtgtgaaggaggaggatgagagtgct
agctccctgaaacctggggctctcttcttcagtcgtatcaacaagacacccccagtggca
gccagtgacccggcaggacccagctatgcagcggctacactgcaggcctccagcgccgcc
tcctcagcctccccggcctccaaggcagcaggcagcrccttcaagcctcaggagtccccc
aaaggcaagaggaagctggatttaaaccaagaagaaaagaagacccccagcaaaccatca
gctcagccctcactccctgccctcaaaagacccaaattgccagctcctgcccgtacccca
gccactccccgcacccctgccccagcacgaggggcagcaccagggaagccccgaggagaa
ggcgctgagcccaaggccccccgcgcaggcccgcaggagctggggaagatcctccagggt
gtggtggtggtgctgagtggcttccagaaccccttccgctcggagctccgggacaaggcc
cttgagctgggggccaagtatcgaccggactggactccagacagcacgcacctcatctgc
gcctttgccaacacccccaagtacagccaggtcctcggcctcggaggccgaatcgtgcgc
aaagagtgggtgctggattgtcaccgcatgcggcggcggctgccctcgcggaggtacctc
atggctgggtcaggctcgagcagcgaggacgaggggggctctcacagcggcggcagtggg
aatgaagcccccaaggctccccgaaagcgcccccagaccaaagccaagccccctcaggca
gcaggacctagctcaccccagagacccccaaccccagaagagaccaaaccagcctcacca
ggggcccaggaagataatgacgacactgaggcggagcagtcagaaggacaggacaacggg
gcagaagactctggggacaccgaggacgagctgagaagggtggccgagcagaaggaagaa
aggcagccccctggtcaggaggagaatggtgaggacccgtacgcgggatccacagatgag
aacacggaccacgagggccccccggagtctcccgacctgccagttcccgagctcccagac
tttttccagggcaaacgcttcttcctttacggggagttcccaggggacgagcggcggatg
ctcagccgctatgtcacagccttcaacgggtcagtctcnnnnnnnnnnnnnnnnnnnncc
cgctttgtgatcaccgcgcaggagtgggaccccagctttgaggaggccttgacggacaac
ccctccctggtgttcgtccgyccccgctggatctacagttgcaacgagaagcagaagtta
cttccccaccagctctacggggtggtgccccaggcgtga

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