KEGG   Bos indicus (zebu cattle): 109573167
Entry
109573167         CDS       T04792                                 
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu04142  Lysosome
biu04144  Endocytosis
biu04721  Synaptic vesicle cycle
biu04961  Endocrine and other factor-regulated calcium reabsorption
biu05016  Huntington disease
biu05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:biu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109573167 (CLTC)
   04142 Lysosome
    109573167 (CLTC)
 09150 Organismal Systems
  09155 Excretory system
   04961 Endocrine and other factor-regulated calcium reabsorption
    109573167 (CLTC)
  09156 Nervous system
   04721 Synaptic vesicle cycle
    109573167 (CLTC)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    109573167 (CLTC)
  09164 Neurodegenerative disease
   05016 Huntington disease
    109573167 (CLTC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:biu04131]
    109573167 (CLTC)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:biu04147]
    109573167 (CLTC)
Membrane trafficking [BR:biu04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    109573167 (CLTC)
Exosome [BR:biu04147]
 Exosomal proteins
  Proteins found in most exosomes
   109573167 (CLTC)
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_PEP5_VPS11 TPR_1 TPR_Vps41
Other DBs
NCBI-GeneID: 109573167
NCBI-ProteinID: XP_019835907
UniProt: A0A6P5DFK4
LinkDB
Position
19:9841432..9906263
AA seq 1655 aa
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRVCNENSLFKSLSRYLVRRKDPELWGSVLLESNPYRRPLIDQVVQTALS
ETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRV
MDQINRLDNYDAPDIANIAIMNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAE
RCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMA
RKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNN
VSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHA
DELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFW
SRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVAN
VELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNN
KSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNR
WKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPD
VVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGQPQLM
LTAGPSVAVPPQAPFGYGYTAPAYGQPQPGFGYSM
NT seq 4968 nt   +upstreamnt  +downstreamnt
atggcccagattctgccaattcgttttcaggagcatcttcagctccagaacctgggtata
aacccagcaaatattggcttcagtaccttgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaattattgatatgaatgacccaagtaat
ccaattcgaagaccaatttcagcagacagcgccatcatgaatccagccagcaaagtaatt
gcactaaaagctgggaaaactctccagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgatgtcaccttctggaaatggatctctttgaatacggttgct
cttgttacggataatgcagtttatcattggagtatggaaggagagtcgcagccggtgaaa
atgtttgatcgccactctagcctcgcagggtgccagattatcaattatcgaactgatgca
aagcaaaagtggttacttctgactggcatatctgcacagcaaaatcgtgtggtgggagct
atgcagttgtattctgtagataggaaagtgtctcagcccattgagggacacgcggctagc
ttcgcacaattcaagatggaaggcaatgcagaagagtcaacrttgttttgttttgcagta
cggggtcaagcgggagggaagttacatatcattgaagttggcacaccaccaacagggaac
caaccatttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagatcagtgaaaagcatgatgtagtattcttgattacgaagtatggt
tacatccacctctatgaccttgagactggtacctgcatctacatgaatagaatcagtgga
gaaacgatctttgtcactgcacctcatgaagccacggctggaataattggagtaaacaga
aagggacaggttctctcagtatgtgtggaagaagaaaacataatcccttatatcaccaat
gtcctacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctttttgcccagggaaattactcagaggca
gcaaaggtggccgctaatgcaccaaagggaattcttcgtaccccagacaccatccgtcgg
ttccagagtgttccagctcagccaggtcaaacttcacccctacttcagtactttggaatc
cttttggaccagggccagctaaacaaatatgaatccttagaactgtgtaggcctgtactt
cagcaggggcggaaacagcttttggagaaatggttaaaagaagataagctggaatgttct
gaagaactgggagaccttgtgaaatctgtggaccctacattggcgcttagtgtgtactta
agggctaacgttccaaataaagtcattcagtgctttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatatactccagactggatctttctgctgagaaat
gttatgcgtatcagtccagatcaggggcagcagtttgctcaaatgttagttcaggatgaa
gaacctcttgctgatatcacccagattgtcgatgtgtttatggaatacaatctaattcag
cagtgtactgcattcttgcttgatgccctgaagaataatcgcccatctgaaggtccttta
cagacgaggttgcttgagatgaaccttatgcatgcacctcaggtcgcagatgctattcta
ggcaatcagatgttcacgcattatgaccgggctcatatcgctcagctgtgtgaaaaggct
ggcctcttgcagcgtgcgttagaacacttcactgacttatatgatataaagcgtgcagtc
gttcacacgcatcttcttaaccctgagtggttagtgaattactttgggtccttatcagtg
gaagactccctagaatgcctcagggccatgctgtctgccaatattcgtcagaatctacag
atctgtgtacaggtggcttctaagtatcatgaacaactgtccactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtcttttttattttctgggatccattgttaac
tttagtcaagacccagatgtgcactttaaatatattcaggcagcttgcaagactgggcag
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcgaagctaacagatcagttaccacttatcattgtgtgcgaccga
tttgactttgtccatgatttggtgctctatttatatagaaataatcttcagaagtatata
gaaatatatgtacagaaggtgaatccaagtcgactgcctgtggttattgggggattactt
gatgttgattgctctgaagatgtcattaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgagcttgttgctgaggttgaaaaaagaaacagattgaaactgcttctgcct
tggctggaggccagaattcatgagggctgtgaagagcctgctactcataatgcattagcc
aaaatctacatagacagtaataacaatccagagcggtttcttcgggaaaatccttactat
gacagtcgtgttgttggaaagtattgtgagaagagagtctgcaatgagaattccctcttc
aaaagtctgtctcgctatctggtacggcggaaggacccagaattgtggggtagtgtgctg
ctggaaagcaatccttacaggagacccctcattgatcaggttgtacagacagccttgtct
gaaactcaggaccccgaggaagtgtcagtaactgtcaaggcctttatgactgcagacctt
cctaatgaactcattgaactgctggagaaaatagtccttgataactctgtattcagtgaa
cacaggaacctgcaaaacctcctcatcctcactgcaatcaaggctgaccgtacacgtgtt
atggaccagattaaccgcctggataattatgatgccccagatattgccaacatcgccatc
atgaatgagctctttgaagaagcatttgccattttccggaaatttgatgtcaatacctca
gcagtgcaggtcttgatcgaacatattggaaacttggatcgggcatatgagtttgctgaa
cgctgcaatgaaccggcagtctggagtcagctcgcaaaagctcagttgcagaaaggaatg
gtgaaagaagccattgattcttatatcaaagcagatgatccttcatcatacatggaagtt
gttcaggccgccaatactagtggaaactgggaagagctggtgaagtacttgcagatggcc
cgcaagaaggctcgtgagtcctatgtggagacagaattgatctttgcgctggctaaaaca
aaccgcctagcagagttggaagagttcatcaatgggccaaataatgctcatatccagcaa
gttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagttgttgtacaataat
gtttccaattttggacgcttggcatccaccctggttcacctgggtgaatatcaggcagct
gttgatggagctaggaaagccaacagtacccgaacatggaaagaggtctgctttgcctgt
gtagatgggaaggagttccgtctcgctcagatgtgtgggcttcatattgtagtacatgca
gacgagttggaggaacttatcaactactatcaggatcgtgggtattttgaagagctgata
accatgttggaagcagcactgggacttgagcgagctcacatggggatgttcaccgaatta
gctattctgtattctaagtttaagccacagaaaatgagggagcacctggagctgttctgg
tccagagtgaatattcctaaggtgctaagagctgcagaacaagcccatctttgggcagaa
ttggtgtttttgtatgacaaatacgaagaatatgataatgccataattaccatgatgaat
catcctactgatgcatggaaagaagggcagttcaaagacatcattaccaaggttgccaat
gtggagctatactacagagcaatacaattctacttagaattcaagccactgttgttaaat
gatttgctgatggtgctgtctccacggttggaccatactcgtgcagtcaattatttcagc
aaggttaaacagctaccgctggtgaaaccctatttgcgttcagttcagaaccacaacaac
aaatctgtgaatgagtcactgaacaacctctttattacagaagaagattatcaggctctg
agaacatcgatagatgcttatgacaactttgacaatatctcacttgctcagcgtttggaa
aagcatgaactcattgagttcagaagaattgctgcttacctcttcaaaggcaataatcgc
tggaaacagagtgtagagctgtgcaagaaagatagcctgtacaaggatgcaatgcagtat
gcctctgaatctaaagatactgaattggctgaagagctcttacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcatgtctctttacttgttatgatcttttaaggccagat
gttgtcctggaaactgcatggaggcacaatatyatggattttgccatgccctacttcatc
caagtcatgaaggaatacttgacaaaggtggataaattagatgcttcagaatcactgaga
aaagaggaagaacaagctacggagacacaacctattgtttatggtcagccccagctgatg
ctgacagcaggacccagcgttgcagtccctccccaggcgccgtttggctatggttacact
gcaccagcctacgggcagcctcagcctggctttgggtacagcatgtga

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