Bos indicus (zebu cattle): 109573206
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Entry
109573206 CDS
T04792
Symbol
HIC1
Name
(RefSeq) LOW QUALITY PROTEIN: hypermethylated in cancer 1 protein
KO
K24384
hypermethylated in cancer protein
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109573206 (HIC1)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
109573206 (HIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
BTB
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-Di19
zf-C2H2_11
zf-C2H2_15
zf-C2H2_16
Zn_ribbon_8
Zf-C2H2_ZNF451
TRASH_HVO_1752_C
LIM
Motif
Other DBs
NCBI-GeneID:
109573206
NCBI-ProteinID:
XP_019835943
UniProt:
A0A6P5DCF8
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All DBs
Position
19:23156621..23172038
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AA seq
782 aa
AA seq
DB search
MSEFRNMYTGTFSSKPQFLWGSQVRGWGLQVGTSGRLNLRTGPPPGSSSSSASLHPRCAG
RRPWLCRAKYRTAARWRHSCSSAXXPGPLQIRVCGKRGGAETRPGRGEDGPAGQTDRGPG
GRRAAQRSHVPPWIRRQPGPGLPTCPPGECAGQTMLDTMEAPGHSRQLLLQLNNQRTKGF
LCDVIIVVQNALFRAHKNVLAASSAYLKSLVVHDNLLNLDHDMVSPAVFRLVLDFIYTGR
LADGAEAAAAAAVAPGAEPSLGAVLAAASYLXIPDLVALCKKRLKRHGKYCHLRGGGGGA
PERRCSPLCGLDLSKKSPPGSALPERPPGERELPPRPDSPPSAGPAAYKEPPLTLPPLPP
LPFQKLEEAGPPPDPFRGGGGSPGSEPPGRPDGPSLLYRWMKHEPGLGSYGDELGRERGS
PSERCEERGGDPSASPGGPPLGLAKPPRYAGSLDGPGAGGDGDDYKSSSEETGSSEDPSP
PGGPPFGGGGDKVAGAPGGLGELLRPYRCASCDKSYKDPATLRQHEKTHWLTRPYPCTIC
GKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKF
AQQRNLISHMKMHAVGGAAGAAGALAGLGGLPGVPGPDGKGKLDFPEGVFAVARLTAEQL
SLKQQDKAAAAELLAQTTHFLHDPKVALESLYPLAKFTAELGLSPDKAAEVLSQDARSWV
GHTGVGAGARSSTLIQGEGERLGMGRPIWFARLPSLQPATSLLNPGSRGGSQHFRPPLGG
AL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatttagaaatatgtacacaggaacattcagctcaaaaccccaatttctgtgg
ggctcgcaggtccggggctggggactccaggtgggcacatctggaaggctgaatctgaga
acaggcccccctcctgggtccagttcgtcatctgcgagcctccatcccaggtgcgcagga
aggaggccgtggctgtgccgcgcaaagtaccgcacggccgcgaggtggcgccatagctgc
agcagcgccnnnnngcccgggccgctccagataagagtgtgcggaaagcgcggcggggct
gagacgcgaccaggacgcggggaggacggaccagcaggacagaccgaccgggggcccggc
gggcggagggcagcgcagcgcagccacgtccccccctggatccgccggcagccgggcccg
gggcttccgacatgccccccaggagagtgtgctgggcagacgatgctggacacgatggag
gcgcccggccactccaggcagctgctgctgcagctcaacaaccagcgcaccaagggcttc
ttgtgcgacgtgatcatcgtggtgcagaacgccctcttccgcgcgcacaagaacgtgctg
gcggccagcagcgcctacctcaagtccctggtggtgcacgacaacctgctcaacctggac
catgacatggtgagcccggccgtgttccgcctggtgctggacttcatctacaccggccgc
ctggcggatggcgcggaggctgcggcggcggctgccgtggccccgggggccgagccgagc
ctgggcgccgtgctggccgccgccagctacctgcasatccccgacctcgtggcgctgtgc
aagaaacgcctcaagcgccacggcaagtactgccacctgcggggcggcggcggcggcgcc
ccggagcgccgctgctccccgctctgcggcctggacctgtcaaagaaaagcccgccgggc
tccgcgctcccagagcgaccgccgggggagcgagagctgcccccacgcccagacagccct
cccagcgcmggccccgccgcctacaaggagccaccactcaccctgccaccgctgccgccg
ctgcccttccagaagctggaggaggccggaccgcctccggatccgttccgaggtggcggc
ggcagcccgggatccgagccccccggccgccccgacgggcccagcctcctctaccgctgg
atgaagcacgagccaggcctgggcagctacggcgacgagctgggccgcgagcgcggctcc
cccagcgaacgctgcgaggagcgcggcggagacccctcggcctcgcccggggggcctccg
ctcggcctggcgaagccgccgcgctacgcgggcagcttggacgggcctggcgccggcggc
gacggcgacgactacaagagcagcagtgaggagacgggcagcagtgaggaccccagccct
cccggcgggcccccttttggaggcggtggggacaaggtggccggggccccggggggcctg
ggcgagctgctgcggccgtaccgctgcgcgtcgtgcgacaagagctacaaggacccggcc
acgctgcggcagcacgagaagacccactggctgacgcggccctacccctgcaccatctgc
gggaagaagttcacgcagcgcgggaccatgacgcgccacatgcgcagccacctgggcctc
aagcccttcgcgtgcgacgcgtgcggcatgcgcttcacgcgccagtaccgcctcaccgag
cacatgcgcatccactcgggcgagaagccctatgagtgccaggtgtgcggcggcaagttc
gcccagcagcgcaacctcatcagtcacatgaagatgcacgctgtgggcggcgcggccggc
gcggccggggcgctggcggggctgggggggctccccggcgtcccgggccccgacggcaag
ggcaagctcgatttccccgagggcgtctttgcagtggcgcgcctcacggccgaacagctc
agcctgaagcagcaggacaaggcggctgcggccgagctgctggctcagaccacgcacttc
ctgcacgaccccaaggtggcgctcgagagcctctacccgctggccaagttcaccgcggag
ctgggcctcagccccgacaaggcggccgaggtgctgagccaggacgcgaggagctgggtg
gggcacacgggggtgggtgctggggccagaagcagcaccctcatacagggggagggagaa
aggctgggcatggggcggcccatctggttcgcccgcctgccgtcgctgcagccagccacc
tccctgctaaatcctggcagccgaggagggtcccagcacttccgcccacccttaggaggg
gctctgtga
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