Bos indicus (zebu cattle): 109573354
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Entry
109573354 CDS
T04792
Name
(RefSeq) tripartite motif-containing protein 47-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04064
NF-kappa B signaling pathway
biu04622
RIG-I-like receptor signaling pathway
biu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
109573354
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109573354
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
109573354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
biu04121
]
109573354
Enzymes [BR:
biu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109573354
Ubiquitin system [BR:
biu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109573354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
TRAF3_RING
Sina_RING
zf-Tbcl_FmdE
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
109573354
NCBI-ProteinID:
XP_019836075
UniProt:
A0A6P5DF67
LinkDB
All DBs
Position
19:complement(57990473..58001516)
Genome browser
AA seq
701 aa
AA seq
DB search
MRTVKEGPXEGGCRRGLTALLGPAVAARGSKPLALLDMQRVSLPSCPRFVPGIRAGTKTQ
ASVYAPVWVQSQYPVGRPAVSNRRKGVPLKGPSTPALASTWLCPVFPGPVQDQAPALQXT
AKLSGAPQGQFLMNDSSLCTLEDQVLCPVCLEVFRNPVTTACGHNFCMSCLQGFWDYQAT
MGEPLYCPQCRESFPTRPRLCKNVILEEMVTCFTQAKGQTLGSSRSLAGPRDVPCDFCAP
EKLKSVKSCLQCMASLCEKHLRSHLEDQVFHGHQLLEPVWDLKSRLCRKHRKLRRLYCRT
EGCCVCGACLLEEHKNHDTIPLEEERARKEVEVRKVQANVENQMLIITSDSQKHRGQVAF
LSKLIQTTRDEVNACFSEIIQEIKQMQMKVLDFVEKEEAAALGKLGGSIQQSHNRLLKLE
GDSIWLRSLLANRSDQQFLQELPRLKHFPACVEPLMGTNCEEKQSFLQLPETLAELRTRL
VDMGLSFINQLLLKGIKMNSYEVLPPDVDRKILLKCYCNLNFDATTASEELFLFKETHSV
LNLGILLEPFAAGGPFPGFKQWPQVLCSRGLAEGRHYWEADVSNSWVCLGVTYRRSPPLG
GRPRRNIVYLLGRNPYSWCLEWDSLKFSVWHNNTQTVLHGGYHRTLGVLLDCAAGCLSFY
GVAGGVSLLYRFLASFLEPLYPAVMVSSGASVTLKQRPSEA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgtcaaggaggggccctkcgagggaggctgccgacgggggctcaccgcactg
ctgggaccagctgttgctgccagaggcagcaagcctttggctctccttgacatgcagaga
gtttcactaccttcttgtccaagatttgttccaggaattcgggcagggacaaaaacacaa
gcctcagtttatgcccctgtgtgggtacagtcccagtaccccgtgggcagaccagctgtt
tccaacagaagaaaaggggtccccctcaaaggcccctcaactcccgccctggcttcaacc
tggctttgccccgtcttcccagggccagtccaggaccaagccccagccctgcagcycact
gccaagctctcaggagctccccaaggccagttcctgatgaatgacagcagtctctgcacg
ctggaggaccaagtcctctgtcccgtttgcctggaggtgttccgcaacccagtcaccacc
gcctgcgggcacaacttctgcatgagctgcctccagggtttctgggactaccaggccacc
atgggcgagccactctactgcccccagtgccgggagagcttccccacgcggcctcgcctc
tgcaagaacgtcatcctggaggagatggtgacatgcttcacccaggccaagggccagacc
ttggggtcctcacggagcctggccgggcccagggacgtgccctgcgacttctgtgcccct
gagaagctcaagtccgtcaagtcgtgcctgcagtgcatggcctccctgtgcgagaagcac
ctgcgcagccacttagaggaccaggtgttccacgggcaccagctgctggagcccgtgtgg
gacctcaagagccggctgtgccgcaagcaccgcaagctccggcggctgtactgccgcacc
gagggctgctgcgtgtgcggggcctgcctgctggaggagcacaagaaccacgacaccatc
ccgctggaggaggagcgcgcacgcaaggaggtcgaggttcggaaggtccaggccaacgtg
gagaaccagatgttgatcatcacctctgacagccaaaagcaccggggccaggtggctttt
ctctcgaaattgatccagacgactcgggacgaggtgaacgcctgcttctcagagatcatc
caggagatcaaacagatgcagatgaaggtgctggatttcgtggagaaagaggaggctgcc
gccctggggaagctgggcggctccatccagcagagtcacaaccggctcctgaagctggag
ggggacagcatctggctccgaagcctgcttgccaaccgcagcgaccagcagtttctgcag
gagttgcccaggctgaagcacttccctgcctgcgtggagcccctgatgggcaccaactgc
gaggagaagcagagcttcctccagctgccagagacgttggcagagctccggacccgactg
gtggacatgggtctcagcttcatcaaccagctcctcctgaagggcattaagatgaactcc
tatgaggtgctgcccccggatgtggacaggaaaatacttctcaagtgttactgcaacctg
aacttcgacgccaccacggccagcgaggagctcttcctgttcaaggagacccactcggtg
ctgaacctgggcatcctcctggagcccttcgcggcgggcggccccttcccgggcttcaaa
cagtggccgcaggtgctgtgctcgcgcggcctggccgagggccgccactactgggaggcc
gacgtgtccaactcgtgggtgtgcctgggcgtcacctaccgccgcagtcccccgctcggc
ggccgcccgcgccgcaacatcgtctatttgctgggccgcaatccctactcgtggtgcctg
gagtgggactcgctcaagttctccgtgtggcacaacaacacgcagacggtgctgcacggc
ggctaccaccgcacgctcggcgtgttgctcgactgcgcggcaggctgcctctccttctac
ggcgtggcgggcggcgtgagcctcctctaccgcttcctcgcctccttcctggagccgctc
taccctgccgtcatggtcagcagcggcgcctcggtcacgctcaagcagcgcccctccgag
gcctag
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