Bos indicus (zebu cattle): 109573390
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Entry
109573390 CDS
T04792
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
biu04714
Thermogenesis
biu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109573390 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
109573390 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109573390 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109573390 (SMARCD2)
03036 Chromosome and associated proteins [BR:
biu03036
]
109573390 (SMARCD2)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109573390 (SMARCD2)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109573390 (SMARCD2)
PBAF complex
109573390 (SMARCD2)
GBAF(ncBAF) complex
109573390 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109573390
NCBI-ProteinID:
XP_019836142
UniProt:
A0A6P5DG68
LinkDB
All DBs
Position
19:complement(49626761..49636039)
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPXXXXXXXXXXXXXAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDTAGTTGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcg
gttgccgcggccctgggagcgccgcctccgccggcgggacccnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnggctggaggcgtggggggccccggggccgctgccttccgc
cccatgggccccgcgggcccggcggcgcagtaccagcggcctggcatgtccccagggagc
cggatgcccatggctggcttgcaggtgggaccccctgccggctccccctttggcacagct
gctccacttcgacctggcatgccacccaccatgatggacccgttccgaaaacgcctgctt
gtgcctcaggcccagcccccgatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaagttctacctcagcgaattcgggagcttgttccagagtctcaggcgtacatg
gacctcttggcttttgaacggaagctggaccagaccattgctagaaagcggatggagatc
caggaggccatcaaaaagcctctgacgcaaaaacgaaagctgcggatctatatttccaat
acattcagtcccagcaaggcagaaggtgacactgcaggaaccacagggacccccggagga
acccctgcaggggacaaggtggcttcctgggaactccgagtagagggaaaactgctggac
gatcctagtaaacagaagcggaagttttcttccttctttaagagccttgtcatcgagctg
gacaaggaactgtacgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagacagatggcttccaggtgaaacggcccggagacctgaacgtcaagtgcaccctc
ctgctcatgctggatcatcagcccccgcagtacaagctggacccccgcctggcgaggctg
ctaggggtgcacacgcagacgagggctgccatcatgcaggccctgtggctctacatcaaa
cacaaccagctgcaggacggccacgagcgcgagtacatcaactgcaaccgctacttccgc
cagatcttcagctgcggccgactacgtttctctgagattcccatgaagctggcggggttg
ctgcagcatccagaccccattgtcatcaaccacgtcatcagcgtggaccctaacgaccag
aagaagacagcctgttacgacattgatgtggaggtggatgacccgctcaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagatcgcctcccttgatgtcaagatc
cacgagactattgagtccatcaaccagctgaagacccagagggatttcatgctcagtttt
agcactgacccccaggacttcatccaggagtggctccgttcccagcgccgggacctcaag
atcatcactgatgtgattgggaacccggaggaggagagacgagcagctttctaccaccag
ccctgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcaacgaaggcag
gaactggaacaggtgctgggaatccgcctgacctaa
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